FFCP PHASE1:Hg19::chr12:96841308..96841312,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:96841308..96841312,+ | |||
|coexpression_cluster_id=C784 | |||
|description=CAGE_peak_at_chr12:96841308..96841312,+ | |description=CAGE_peak_at_chr12:96841308..96841312,+ | ||
|id=chr12:96841308..96841312,+ | |id=chr12:96841308..96841312,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.70e-29!24;CL:0000115!4.47e-18!35;CL:0000071!5.98e-18!18;CL:0002546!5.98e-18!18;CL:0002078!1.07e-14!44;CL:0005020!9.87e-14!6;CL:0002138!9.87e-14!6;CL:0005022!9.87e-14!6;CL:0000213!4.01e-11!57;CL:0000215!4.01e-11!57;CL:0000624!8.04e-09!6;CL:1000413!5.97e-08!9;CL:0002618!8.87e-08!3;CL:0002144!1.01e-07!3;CL:0000222!1.23e-07!119;CL:0000623!1.82e-07!3;CL:0000825!1.82e-07!3 | |ontology_enrichment_celltype=CL:0002139!3.70e-29!24;CL:0000115!4.47e-18!35;CL:0000071!5.98e-18!18;CL:0002546!5.98e-18!18;CL:0002078!1.07e-14!44;CL:0005020!9.87e-14!6;CL:0002138!9.87e-14!6;CL:0005022!9.87e-14!6;CL:0000213!4.01e-11!57;CL:0000215!4.01e-11!57;CL:0000624!8.04e-09!6;CL:1000413!5.97e-08!9;CL:0002618!8.87e-08!3;CL:0002144!1.01e-07!3;CL:0000222!1.23e-07!119;CL:0000623!1.82e-07!3;CL:0000825!1.82e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.37e-72;24!CL:0002138;1.69e-62;6!CL:0000115;1.03e-34;36!CL:0002618;1.75e-32;3!CL:0002144;5.07e-32;3!CL:0000071;5.86e-28;18!CL:0002078;3.23e-26;45!CL:0000213;3.07e-17;58!CL:0000215;3.07e-17;58!CL:0002543;1.38e-16;6!CL:0000623;9.29e-15;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.62e-72,24;CL:0005020,1.53e-62,6;CL:0002138,1.53e-62,6;CL:0005022,1.53e-62,6;CL:0000115,1.98e-47,36;CL:0002078,1.35e-37,45;CL:0002618,1.41e-32,3;CL:0002144,2.68e-32,3;CL:0000213,9.02e-29,58;CL:0000215,9.02e-29,58;CL:0000071,4.60e-28,18;CL:0002546,4.60e-28,18;CL:0002543,1.25e-16,6;CL:0000623,1.23e-14,3;CL:0000825,1.23e-14,3;CL:0000222,8.29e-13,121;CL:0000076,1.48e-07,63 | |||
|ontology_enrichment_development_v019=CL:0005022;1.69e-62;6!CL:0002546;5.86e-28;18!UBERON:0000358;4.53e-12;1!UBERON:0005425;1.07e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.98e-19!69;UBERON:0001986!5.98e-18!18;UBERON:0004638!5.98e-18!18;UBERON:0004852!5.98e-18!18;UBERON:0004535!1.49e-16!110;UBERON:0001009!8.04e-16!113;UBERON:0002049!1.14e-15!79;UBERON:0007798!1.14e-15!79;UBERON:0000487!5.25e-14!22;UBERON:0001981!2.35e-13!60;UBERON:0007500!2.35e-13!60;UBERON:0004537!2.35e-13!60;UBERON:0006965!2.35e-13!60;UBERON:0004872!1.47e-12!84;UBERON:0006914!6.86e-12!25;UBERON:0001473!4.99e-10!8;UBERON:0004536!4.99e-10!8;UBERON:0006558!4.99e-10!8;UBERON:0003914!8.90e-09!118;UBERON:0003915!5.97e-08!9;UBERON:0004700!5.97e-08!9;UBERON:0001917!5.97e-08!9;UBERON:0002465!8.24e-08!10;UBERON:0001915!1.01e-07!3;UBERON:0001982!1.01e-07!3;UBERON:0000025!1.61e-07!194;UBERON:0002066!3.15e-07!5;UBERON:0001637!3.19e-07!42;UBERON:0003509!3.19e-07!42;UBERON:0004572!3.19e-07!42;UBERON:0004111!3.56e-07!241 | |ontology_enrichment_uberon=UBERON:0000055!2.98e-19!69;UBERON:0001986!5.98e-18!18;UBERON:0004638!5.98e-18!18;UBERON:0004852!5.98e-18!18;UBERON:0004535!1.49e-16!110;UBERON:0001009!8.04e-16!113;UBERON:0002049!1.14e-15!79;UBERON:0007798!1.14e-15!79;UBERON:0000487!5.25e-14!22;UBERON:0001981!2.35e-13!60;UBERON:0007500!2.35e-13!60;UBERON:0004537!2.35e-13!60;UBERON:0006965!2.35e-13!60;UBERON:0004872!1.47e-12!84;UBERON:0006914!6.86e-12!25;UBERON:0001473!4.99e-10!8;UBERON:0004536!4.99e-10!8;UBERON:0006558!4.99e-10!8;UBERON:0003914!8.90e-09!118;UBERON:0003915!5.97e-08!9;UBERON:0004700!5.97e-08!9;UBERON:0001917!5.97e-08!9;UBERON:0002465!8.24e-08!10;UBERON:0001915!1.01e-07!3;UBERON:0001982!1.01e-07!3;UBERON:0000025!1.61e-07!194;UBERON:0002066!3.15e-07!5;UBERON:0001637!3.19e-07!42;UBERON:0003509!3.19e-07!42;UBERON:0004572!3.19e-07!42;UBERON:0004111!3.56e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;7.64e-47;8!UBERON:0004536;7.64e-47;8!UBERON:0006558;7.64e-47;8!UBERON:0002465;1.93e-37;10!UBERON:0010523;5.07e-32;3!UBERON:0001915;5.07e-32;3!UBERON:0001982;5.07e-32;3!UBERON:0004638;5.86e-28;18!UBERON:0001986;5.86e-28;18!UBERON:0004852;5.86e-28;18!UBERON:0000487;8.94e-23;22!UBERON:0006914;5.67e-20;25!UBERON:0002066;8.96e-20;5!UBERON:0000055;1.02e-14;65!UBERON:0002405;1.11e-13;27!UBERON:0000490;7.61e-13;33!UBERON:0002049;7.70e-13;75!UBERON:0007798;7.70e-13;75!UBERON:0000941;1.07e-11;1!UBERON:0001785;1.07e-11;1!UBERON:0002464;1.07e-11;1!UBERON:0004904;1.07e-11;1!UBERON:0001021;1.07e-11;1!UBERON:0001638;2.99e-11;9!UBERON:0010260;2.99e-11;9!UBERON:0003920;2.99e-11;9!UBERON:0004582;2.99e-11;9!UBERON:0002193;9.47e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,7.08e-47,8;UBERON:0004536,7.08e-47,8;UBERON:0006558,7.08e-47,8;UBERON:0002465,1.82e-37,10;UBERON:0010523,2.68e-32,3;UBERON:0001915,2.68e-32,3;UBERON:0001982,2.68e-32,3;UBERON:0004638,4.60e-28,18;UBERON:0001986,4.60e-28,18;UBERON:0004852,4.60e-28,18;UBERON:0000055,2.85e-24,68;UBERON:0000487,7.34e-23,22;UBERON:0002049,6.36e-21,78;UBERON:0007798,6.36e-21,78;UBERON:0006914,4.77e-20,25;UBERON:0002066,7.89e-20,5;UBERON:0004535,1.97e-14,109;UBERON:0001009,5.41e-14,112;UBERON:0000941,9.61e-12,1;UBERON:0001785,9.61e-12,1;UBERON:0002464,9.61e-12,1;UBERON:0004904,9.61e-12,1;UBERON:0001021,9.61e-12,1;UBERON:0003902,9.61e-12,1;UBERON:0005425,9.61e-12,1;UBERON:0001638,2.79e-11,9;UBERON:0010260,2.79e-11,9;UBERON:0003920,2.79e-11,9;UBERON:0004582,2.79e-11,9;UBERON:0007500,4.09e-08,59;UBERON:0001981,4.09e-08,59;UBERON:0004537,4.09e-08,59;UBERON:0006965,4.09e-08,59 | |||
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|short_description=p@chr12:96841308..96841312,+ | |short_description=p@chr12:96841308..96841312,+ | ||
}} | }} |
Latest revision as of 13:56, 24 July 2015
Short description: | p@chr12:96841308..96841312, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96841308..96841312, + |
Coexpression cluster: | C784_Endothelial_Lymphatic_Renal_placenta_Hepatic_chronic_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.62e-72 | 24 |
lymphangioblast | 1.53e-62 | 6 |
endothelial cell of lymphatic vessel | 1.53e-62 | 6 |
vascular lymphangioblast | 1.53e-62 | 6 |
endothelial cell | 1.98e-47 | 36 |
meso-epithelial cell | 1.35e-37 | 45 |
endothelial cell of umbilical vein | 1.41e-32 | 3 |
capillary endothelial cell | 2.68e-32 | 3 |
lining cell | 9.02e-29 | 58 |
barrier cell | 9.02e-29 | 58 |
blood vessel endothelial cell | 4.60e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.60e-28 | 18 |
vein endothelial cell | 1.25e-16 | 6 |
natural killer cell | 1.23e-14 | 3 |
pro-NK cell | 1.23e-14 | 3 |
mesodermal cell | 8.29e-13 | 121 |
squamous epithelial cell | 1.48e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 7.08e-47 | 8 |
lymph vasculature | 7.08e-47 | 8 |
lymphatic part of lymphoid system | 7.08e-47 | 8 |
lymphoid system | 1.82e-37 | 10 |
microcirculatory vessel | 2.68e-32 | 3 |
endothelium of capillary | 2.68e-32 | 3 |
capillary | 2.68e-32 | 3 |
blood vessel endothelium | 4.60e-28 | 18 |
endothelium | 4.60e-28 | 18 |
cardiovascular system endothelium | 4.60e-28 | 18 |
vessel | 2.85e-24 | 68 |
simple squamous epithelium | 7.34e-23 | 22 |
vasculature | 6.36e-21 | 78 |
vascular system | 6.36e-21 | 78 |
squamous epithelium | 4.77e-20 | 25 |
umbilical vein | 7.89e-20 | 5 |
cardiovascular system | 1.97e-14 | 109 |
circulatory system | 5.41e-14 | 112 |
cranial nerve II | 9.61e-12 | 1 |
cranial nerve | 9.61e-12 | 1 |
nerve trunk | 9.61e-12 | 1 |
nerve connecting eye with brain | 9.61e-12 | 1 |
nerve | 9.61e-12 | 1 |
retinal neural layer | 9.61e-12 | 1 |
presumptive neural retina | 9.61e-12 | 1 |
vein | 2.79e-11 | 9 |
umbilical blood vessel | 2.79e-11 | 9 |
venous blood vessel | 2.79e-11 | 9 |
venous system | 2.79e-11 | 9 |
epithelial tube open at both ends | 4.09e-08 | 59 |
blood vessel | 4.09e-08 | 59 |
blood vasculature | 4.09e-08 | 59 |
vascular cord | 4.09e-08 | 59 |