FFCP PHASE1:Hg19::chr13:110960429..110960450,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:110960429..110960450,+ | |||
|description=CAGE_peak_at_chr13:110960429..110960450,+ | |||
|id=chr13:110960429..110960450,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.90e-13!119;CL:0000055!1.32e-10!180;CL:0000183!2.93e-08!59;CL:0000213!3.03e-07!57;CL:0000215!3.03e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:1000746;3.03e-13;7!CL:1000612;3.03e-13;7!CL:1000449;1.51e-12;15!CL:0002681;3.16e-11;12!CL:0002584;3.16e-11;12!CL:1000497;9.55e-11;17!CL:0002518;9.55e-11;17!CL:0002188;1.78e-10;5!CL:0000669;3.67e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,7.07e-13,7;CL:1000612,7.07e-13,7;CL:1000449,2.91e-12,15;CL:0002681,5.25e-11,12;CL:0002584,5.25e-11,12;CL:1000497,1.68e-10,17;CL:0002518,1.68e-10,17;CL:0002188,2.16e-10,5;CL:0000669,7.11e-08,4;CL:0000222,8.37e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.80e-11!118;UBERON:0002049!4.39e-11!79;UBERON:0007798!4.39e-11!79;UBERON:0004872!6.77e-11!84;UBERON:0000055!2.30e-10!69;UBERON:0005256!1.35e-09!143;UBERON:0001009!2.20e-09!113;UBERON:0001981!3.39e-09!60;UBERON:0007500!3.39e-09!60;UBERON:0004537!3.39e-09!60;UBERON:0006965!3.39e-09!60;UBERON:0004535!3.44e-09!110;UBERON:0000353!1.91e-07!17;UBERON:0003104!5.56e-07!238;UBERON:0009142!5.56e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;2.27e-13;15!UBERON:0000074;3.03e-13;7!UBERON:0001229;3.03e-13;7!UBERON:0006555;1.51e-12;15!UBERON:0004819;1.51e-12;15!UBERON:0001285;1.51e-12;15!UBERON:0007684;1.51e-12;15!UBERON:0001225;3.16e-11;12!UBERON:0008987;3.16e-11;12!UBERON:0001851;1.44e-08;15!UBERON:0002113;7.50e-07;24!UBERON:0011143;7.50e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,3.78e-13,15;UBERON:0010532,7.07e-13,7;UBERON:0000074,7.07e-13,7;UBERON:0001229,7.07e-13,7;UBERON:0001230,7.07e-13,7;UBERON:0003220,7.07e-13,7;UBERON:0005749,7.07e-13,7;UBERON:0004199,7.07e-13,7;UBERON:0004209,7.07e-13,7;UBERON:0004198,7.07e-13,7;UBERON:0004211,2.91e-12,15;UBERON:0009773,2.91e-12,15;UBERON:0001231,2.91e-12,15;UBERON:0001285,2.91e-12,15;UBERON:0007684,2.91e-12,15;UBERON:0004208,2.91e-12,15;UBERON:0006555,2.52e-11,16;UBERON:0004819,2.52e-11,16;UBERON:0005103,4.32e-11,8;UBERON:0000083,4.32e-11,8;UBERON:0009201,4.32e-11,8;UBERON:0006553,4.32e-11,8;UBERON:0003074,4.32e-11,8;UBERON:0003060,4.32e-11,8;UBERON:0001225,5.25e-11,12;UBERON:0008987,5.25e-11,12;UBERON:0003914,1.39e-10,117;UBERON:0000080,1.05e-09,9;UBERON:0002120,1.05e-09,9;UBERON:0004875,1.05e-09,9;UBERON:0005721,1.05e-09,9;UBERON:0005754,1.05e-09,9;UBERON:0007297,1.05e-09,9;UBERON:0001851,2.12e-08,15;UBERON:0002049,9.88e-08,78;UBERON:0007798,9.88e-08,78;UBERON:0004876,1.08e-07,11;UBERON:0003104,1.38e-07,160;UBERON:0009142,1.38e-07,160;UBERON:0007503,2.81e-07,78;UBERON:0000055,4.72e-07,68;UBERON:0003887,6.08e-07,12 | |||
|phase1_expression=0,1.2846031433459,0.986680828671798,9.00659685178174,7.15137751083661,3.48935409640147,0,0.631719873426831,2.87304191019822,0,5.58240934377942,0.436882744260345,1.05506791291381,0,0.662794751455832,2.6893005858071,0.602694528023977,0,1.46379839637152,0.123121058076788,1.02000345622126,0.626909442956176,0,1.09499540058307,1.38096903554283,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0,0.665188192387692,0.87834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.838998872419812,0.275118041940067,0.208994966536811,0.516833518338658,0,0.66944122552934,2.01414658554573,0.760272105718513,6.10155143870424,0.735326160691737,7.29127753093584,0.17859945656816,1.34717623575702,0.337834441449967,0,0,0.549605231791222,0,0,0,1.98788780678127,0.759783069987479,0.132409180813219,3.44203944898576,0,0,2.1349799145941,7.89336154934912,0,3.63718814588158,1.47115712802113,1.81628913173918,3.45705554687999,0,0.624320153660641,0,0,0.117434498643765,0.323745888736263,0,0,0,0.309977343527296,0,1.7308685049499,0,2.15585442544872,0,0,0,0,0.30648779579902,1.80285670687916,0.340296549480063,0.538168907066586,0.213557388818567,0,0.900273288253207,0.103052529238439,2.31876486041066,0.18611685633159,0.506328996723799,0.584622030967192,1.26216887122057,0,0.161646056818812,2.4850671476163,0.503760491138201,0.67824236924195,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.414644220061482,0,0,1.56449532329816,1.28648187638577,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.55146986366197,0.217879444092406,0,0.269662616320329,0.196221465125346,0.38474715694639,7.38155454624648,5.60967095213783,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0.301586917234893,0,0,0,1.44331342025273,0,0.587043471179108,1.73239737313289,0.925971025153221,3.80508304469197,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.514137463516618,0,0,0.224262168690721,3.92364061949952,0.36669142910475,0.646358578788889,0,0.845302752556,0.797814349754612,3.12022310734098,0,0,0.266422179016099,0.714889968290738,2.17048642156577,1.64648067356154,0.325736184293735,0.355391948742546,2.37585561880029,0.301439377059586,0,1.79951384127703,0,0,0,0.958499421966331,5.7430967917057,1.42636905040718,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.49076596687656,0.500170521059677,0,1.87173775377726,1.24900292158013,1.57702415033935,0.468565659970853,0.300946099727719,2.27407504055985,1.03473071292505,0,0.553107505625109,0.0868836144680828,6.85304051119592,13.3825935286234,0,0,0,0,1.66435439510497,0,0,0.920771839728375,0.561320188866147,0.256278298511402,0,1.44768529029247,4.45254199334973,0.154209693802656,0,0,1.03850885836724,0.116210378459959,0,1.00253235151642,0,0.229628896329213,1.0925470080403,0.786746489756545,0,0.616122696835318,0,1.46139224653261,1.16106791782163,7.96133688496276,3.06168669497728,2.15915916102139,13.880452742126,1.08378575017541,2.00675909541941,0,1.66215201785745,1.34324852833307,0,0,0,0.984043937099117,0,0.515205058238611,0,0,0,0,0,0,0.770243085573222,0.921022048356777,0.413509717453592,0,0.870100163485371,0.255679882248303,0.178064071293475,0.165284915360978,1.34533047155574,0.255225424989168,0.708104465988849,0,1.5740617341532,0,0,0,0.869932992075073,0.37064843820784,2.28999818787186,0.372158369359667,0,1.90630193923825,0.511795582622668,0.42793898803392,0,2.35484592059769,0.179872457583315,1.64722217841633,0.353437207037059,0,0,0.842516912477962,0,1.21856744815642,0,0.136499911407986,0.565621727814851,0,0.551365343546124,2.65375590096488,1.75380354101505,0,1.31178950409327,0.608731130888112,2.16876448669825,1.69017361519345,0.430234056612155,0.294747123039363,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0.222617410045812,0,0,2.59022384726391,0,0,0.20453736500431,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.230850775511391,0,0.69169171316418,0.359030577639089,0.217294743844016,0.638002319463839,1.74035427463538,4.26427820814908,0,0,0,0,0,0,0,0,1.05499032264014,0.326465616318295,0,0,0,0.0884575645033392,6.72133159426988,0,0.123563938946503,0.104421949505455,0,2.40773294189637,0,0,0,0,0.789168805698781,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,2.25980740780532,0.685209623233754,0,0,0.391102765469606,0,1.06726497369676,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.523014231561666,0.101998217636322,0,0,0,0,0.429765441419957,0,0.837847203816763,1.14580212005842,0,0.399358000997982,0.858452096273142,0,0.470284307407084,4.32359860250884,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0.236417121897595,0.524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.628817220398664,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0.553394539744923,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,0,0.604923695052956,0.310874401165561,0.147855149989634,0.63718706865481,1.34940933649081,0.621051827505038,0,0.53168342911599,4.17396049449387,0.150257608997218,1.14241563650639,0,1.45478927362048,1.18151612746737,0.928067519756987,4.37905477568478,0,0,0.336749488765919,1.26184898228651,0.192619830407303,0.214441591374926,2.87093721161733,0.226705925512272,0,0.489473409012935,0.537266523244462,3.70561736593167,0,0.530067437837643,0.38582807654183,0.168942440653073,1.79369063011563,0.345430341731199,0.607719912354764,0,0,0,0,1.96565909307848,0.983091635014877,0,0.19998739585493,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0.212574920101683,0,0,1.90802610392051,0,0,0.705351887381368,1.2249819094128,0,0,0,0,0.252071696221718,0,0.322951291263702,0,0,0,0,0.115525666150338,1.90691047733584,0,0,0.225630985047772,0,0,0.261906694481422,0.655087670040387,0,0,0,0,0,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,4.56579360254748,0,0,0.0714765441766563,0,0,0,1.60342272946051,0.207216164163037,0.3414369541879,0,0,0,0,0.423387050190929,0.68732060563215,1.86123831398592,0,0.335566295393377,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0,0,0,0.150962843566674,0.0771741581079447,1.09279780251979,0,1.71603825227734,0,0.392616934229891,0,0,2.37897960562944,0.0939839179798536,0.902410431630081,0,0,0.352894871715692,0,1.46067277649303,0,0,0,0.0679914901909147,0.436350690340377,5.81929524566941,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0.126698501011437,0,0,0,0.50141507858475,0.151557396436479,0.267964130156178,0.829169439458779,0,0.213233981900981,1.90451545170992,0.0645889098360061,0.0620747142958579,0.112131862580613,0.0636471582781649,0.808468755832877,0.870866991587845,1.36893320434112,0,0.215166616178029,0.99798106963804,0.162806537221949,0.320182037633146,0,0,7.03922827210363,0.733448665097199,3.66206560484165,0.665756774185513,0.805095174364105,0 | |||
|short_description=p@chr13:110960429..110960450,+ | |||
}} |
Latest revision as of 14:31, 24 July 2015
Short description: | p@chr13:110960429..110960450, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110960429..110960450, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 7.07e-13 | 7 |
kidney corpuscule cell | 7.07e-13 | 7 |
epithelial cell of nephron | 2.91e-12 | 15 |
kidney cortical cell | 5.25e-11 | 12 |
renal cortical epithelial cell | 5.25e-11 | 12 |
kidney cell | 1.68e-10 | 17 |
kidney epithelial cell | 1.68e-10 | 17 |
glomerular endothelial cell | 2.16e-10 | 5 |
pericyte cell | 7.11e-08 | 4 |
mesodermal cell | 8.37e-08 | 121 |