FFCP PHASE1:Hg19::chr13:111118370..111118403,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:111118370..111118403,- | |||
|coexpression_cluster_id=C823 | |||
|description=CAGE_peak_at_chr13:111118370..111118403,- | |||
|id=chr13:111118370..111118403,- | |||
|ontology_enrichment_celltype=CL:0000055!1.31e-15!180;CL:0000222!1.05e-13!119;CL:0000183!7.79e-12!59;CL:0000680!6.02e-10!57;CL:0000056!6.02e-10!57;CL:0000355!6.02e-10!57;CL:0000187!2.23e-09!54;CL:0000393!2.10e-08!60;CL:0000211!2.10e-08!60;CL:0000057!9.41e-08!75;CL:0000192!1.49e-07!42;CL:0000514!1.49e-07!42;CL:0000220!4.17e-07!246;CL:0002321!4.21e-07!248;CL:1000449!6.31e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.22e-13;15!CL:1000497;1.03e-11;17!CL:0002518;1.03e-11;17!CL:0002681;2.72e-09;12!CL:0002584;2.72e-09;12!CL:1000507;8.33e-09;10!CL:1000494;8.33e-09;10!CL:1000746;6.25e-07;7!CL:1000612;6.25e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,7.64e-14,15;CL:1000497,6.89e-12,17;CL:0002518,6.89e-12,17;CL:0002681,2.50e-09,12;CL:0002584,2.50e-09,12;CL:1000507,5.07e-09,10;CL:1000494,5.07e-09,10;CL:1000746,6.51e-07,7;CL:1000612,6.51e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.84e-15!79;UBERON:0007798!4.84e-15!79;UBERON:0001009!1.02e-12!113;UBERON:0004535!6.26e-12!110;UBERON:0003914!1.04e-11!118;UBERON:0000055!7.23e-11!69;UBERON:0005256!9.05e-11!143;UBERON:0004872!1.24e-10!84;UBERON:0002385!3.69e-10!63;UBERON:0001015!3.69e-10!63;UBERON:0000383!3.69e-10!63;UBERON:0001134!5.10e-10!61;UBERON:0002036!5.10e-10!61;UBERON:0003082!5.10e-10!61;UBERON:0001981!2.63e-09!60;UBERON:0007500!2.63e-09!60;UBERON:0004537!2.63e-09!60;UBERON:0006965!2.63e-09!60;UBERON:0000477!6.29e-08!286;UBERON:0004290!7.56e-08!70;UBERON:0002100!8.69e-08!216;UBERON:0000468!9.01e-08!659;UBERON:0000490!1.32e-07!138;UBERON:0000914!1.87e-07!83;UBERON:0002329!1.87e-07!83;UBERON:0003077!1.87e-07!83;UBERON:0003059!1.87e-07!83;UBERON:0007282!1.87e-07!83;UBERON:0009618!1.87e-07!83;UBERON:0007285!1.87e-07!83;UBERON:0003103!2.60e-07!69;UBERON:0003104!4.27e-07!238;UBERON:0009142!4.27e-07!238;UBERON:0000486!4.96e-07!82;UBERON:0006555!6.22e-07!17;UBERON:0005103!6.22e-07!17;UBERON:0000083!6.22e-07!17;UBERON:0009201!6.22e-07!17;UBERON:0004819!6.22e-07!17;UBERON:0006553!6.22e-07!17;UBERON:0003074!6.22e-07!17;UBERON:0003060!6.22e-07!17;UBERON:0004211!6.31e-07!16;UBERON:0001285!6.31e-07!16;UBERON:0007684!6.31e-07!16;UBERON:0003220!6.31e-07!16;UBERON:0004208!6.31e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.22e-13;15!UBERON:0004819;1.22e-13;15!UBERON:0001285;1.22e-13;15!UBERON:0007684;1.22e-13;15!UBERON:0001225;2.72e-09;12!UBERON:0008987;2.72e-09;12!UBERON:0000353;3.43e-09;15!UBERON:0004211;8.33e-09;10!UBERON:0009773;8.33e-09;10!UBERON:0001231;8.33e-09;10!UBERON:0004810;8.33e-09;10!UBERON:0002113;1.55e-07;24!UBERON:0011143;1.55e-07;24!UBERON:0001851;4.07e-07;15!UBERON:0000074;6.25e-07;7!UBERON:0001229;6.25e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,7.64e-14,15;UBERON:0009773,7.64e-14,15;UBERON:0001231,7.64e-14,15;UBERON:0001285,7.64e-14,15;UBERON:0007684,7.64e-14,15;UBERON:0004208,7.64e-14,15;UBERON:0006555,8.37e-13,16;UBERON:0004819,8.37e-13,16;UBERON:0002049,1.10e-10,78;UBERON:0007798,1.10e-10,78;UBERON:0003914,1.62e-10,117;UBERON:0001225,2.50e-09,12;UBERON:0008987,2.50e-09,12;UBERON:0000353,3.20e-09,15;UBERON:0004810,5.07e-09,10;UBERON:0001009,1.11e-08,112;UBERON:0004535,2.27e-08,109;UBERON:0000055,3.38e-07,68;UBERON:0001851,3.81e-07,15;UBERON:0002417,6.01e-07,60;UBERON:0000916,6.01e-07,60;UBERON:0010532,6.51e-07,7;UBERON:0000074,6.51e-07,7;UBERON:0001229,6.51e-07,7;UBERON:0001230,6.51e-07,7;UBERON:0003220,6.51e-07,7;UBERON:0005749,6.51e-07,7;UBERON:0004199,6.51e-07,7;UBERON:0004209,6.51e-07,7;UBERON:0004198,6.51e-07,7;UBERON:0002113,7.16e-07,26;UBERON:0003918,7.16e-07,26;UBERON:0011143,7.16e-07,26;UBERON:0005095,7.16e-07,26;UBERON:0007687,7.16e-07,26 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.563817616383885,1.0007329835313,2.23480547213644,3.48935409640147,5.06599756336621,0.631719873426831,3.3954131665979,0.245733936501509,2.79120467188971,0.873765488520689,0.791300934685361,0.37129905888014,0,2.01697543935533,1.80808358407193,1.46062018077475,0.487932798790507,0.123121058076788,0.612002073732759,1.25381888591235,0.572471974262113,0.547497700291537,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,0,0,1.44846518960824,0,0,0.378139268656271,1.77383517970051,0.614843499851882,0.261958150995425,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0.838998872419812,4.12677062910101,0,0.516833518338658,0,0.66944122552934,5.63961043952806,0,12.6912269925048,0,8.91156142669936,0.446498641420399,0,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,2.48485975847659,1.51956613997496,0.397227542439656,1.72101972449288,0.354668382198357,0.560677600142307,0,12.8267125176923,0,1.21239604862719,1.14423332179421,1.66493170409425,1.72852777344,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,2.96720315134268,0,2.15585442544872,0.168336113954066,0,0,0.438977620880838,0,1.05166641234618,1.47461838108027,1.61450672119976,1.06778694409284,0.423863802319124,1.20036438433761,0,1.54584324027377,0.744467425326359,0.337552664482532,0.584622030967192,0.757301322732344,0.276149695926898,0.323292113637624,0.710019185033229,0.403008392910561,0.847802961552438,0.193260853163297,0,0,0.365921118388786,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0,0,0.738155454624648,4.20725321410337,0.8231480226628,0,0,0,0,0,0,1.20097467208968,0.439001141634502,0,0.100528972411631,0.277765335475589,0,0,0,0.463721619900307,0.352226082707465,3.03169540298255,4.62985512576611,6.84914948044554,0,0,0,0,0,0,0.503946384596579,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0.925447434329912,0.901029173531752,0,0.224262168690721,0,0.5867062865676,0.387815147273333,0,1.690605505112,3.72313363218819,1.04007436911366,0.257207374262142,0,0.266422179016099,3.57444984145369,1.62786481617433,0,1.30294473717494,3.19852753868291,2.37585561880029,0.301439377059586,0,1.09970290300263,0,0,0,1.91699884393266,2.29723871668228,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,1.10422342547226,0.500170521059677,0.271265023699736,2.28767947683888,2.14114786556594,1.73472656537328,0.702848489956279,0,0,2.0694614258501,1.32845119707087,0.553107505625109,0.434418072340414,6.2656370388077,5.14715135716284,0,0,0,0,0,0.30239029332968,0,0.306923946576125,1.68396056659844,0.256278298511402,0,2.89537058058494,0,0.154209693802656,0.532685175939381,0,2.59627214591811,0.464841513839837,0,2.20557117333613,0,0.229628896329213,1.27463817604702,0.786746489756545,1.35359883872224,2.54150612444569,1.56869953835371,2.92278449306521,2.95544560900052,0,1.02056223165909,1.72732732881711,10.7959076883203,0.541892875087706,2.50844886927427,0.509752546090077,0,2.91037181138832,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0,0,0.290012154876366,0.616194468458578,0.921022048356777,0.275673144969061,0.429680979473094,0.580066775656914,0.0852266274161009,0.712256285173899,0.165284915360978,0.768760269460425,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0.372158369359667,1.89827654831236,1.90630193923825,0.767693373934002,0,0,0,0.719489830333259,0.54907405947211,0.471249609382746,0.404364963146632,0,0.421258456238981,0.975267478179181,1.21856744815642,1.05650146756755,1.09199929126389,0.282810863907425,1.13008116620243,0,3.3171948762061,0.876901770507525,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.286822704408103,1.76848273823618,0.35667105148125,0.354761064070598,0.422215270595328,0,0,0.699869440489966,0,0,0,1.03558180854457,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.111308705022906,0,0,1.39473591775749,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0.455173793141999,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.461701551022782,0,0,0.269272933229316,0.325942115766024,0.638002319463839,0.549585560411174,2.66517388009317,0,0,0,0,0,0,0,0,0.843992258112108,0.326465616318295,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,1.60515529459758,0,0,0,0,0.394584402849391,4.83962864194656,0,0.379119477770928,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0.193978032976839,0,0.677942222341597,0.685209623233754,0.19871461170299,0,0,0,0.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| |||
|short_description=p@chr13:111118370..111118403,- | |||
}} |
Latest revision as of 14:32, 24 July 2015
Short description: | p@chr13:111118370..111118403, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111118370..111118403, - |
Coexpression cluster: | C823_Fibroblast_Endothelial_hepatic_Pericytes_umbilical_Adipocyte_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 7.64e-14 | 15 |
kidney cell | 6.89e-12 | 17 |
kidney epithelial cell | 6.89e-12 | 17 |
kidney cortical cell | 2.50e-09 | 12 |
renal cortical epithelial cell | 2.50e-09 | 12 |
kidney tubule cell | 5.07e-09 | 10 |
nephron tubule epithelial cell | 5.07e-09 | 10 |
glomerular cell | 6.51e-07 | 7 |
kidney corpuscule cell | 6.51e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 7.64e-14 | 15 |
renal tubule | 7.64e-14 | 15 |
nephron tubule | 7.64e-14 | 15 |
nephron | 7.64e-14 | 15 |
uriniferous tubule | 7.64e-14 | 15 |
nephrogenic mesenchyme | 7.64e-14 | 15 |
excretory tube | 8.37e-13 | 16 |
kidney epithelium | 8.37e-13 | 16 |
vasculature | 1.10e-10 | 78 |
vascular system | 1.10e-10 | 78 |
epithelial tube | 1.62e-10 | 117 |
cortex of kidney | 2.50e-09 | 12 |
renal parenchyma | 2.50e-09 | 12 |
parenchyma | 3.20e-09 | 15 |
nephron tubule epithelium | 5.07e-09 | 10 |
circulatory system | 1.11e-08 | 112 |
cardiovascular system | 2.27e-08 | 109 |
vessel | 3.38e-07 | 68 |
cortex | 3.81e-07 | 15 |
abdominal segment of trunk | 6.01e-07 | 60 |
abdomen | 6.01e-07 | 60 |
primitive nephron | 6.51e-07 | 7 |
renal glomerulus | 6.51e-07 | 7 |
renal corpuscle | 6.51e-07 | 7 |
glomerular capsule | 6.51e-07 | 7 |
metanephric mesenchyme | 6.51e-07 | 7 |
glomerular tuft | 6.51e-07 | 7 |
S-shaped body | 6.51e-07 | 7 |
renal vesicle | 6.51e-07 | 7 |
comma-shaped body | 6.51e-07 | 7 |
kidney | 7.16e-07 | 26 |
kidney mesenchyme | 7.16e-07 | 26 |
upper urinary tract | 7.16e-07 | 26 |
kidney rudiment | 7.16e-07 | 26 |
kidney field | 7.16e-07 | 26 |