FFCP PHASE1:Hg19::chr13:111554995..111555009,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-280bp_to_uc001vrq.2_5end | |association_with_transcript=-280bp_to_uc001vrq.2_5end | ||
|cluster_id=chr13:111554995..111555009,- | |||
|description=CAGE_peak_2_at_uc001vrq.2_5end | |description=CAGE_peak_2_at_uc001vrq.2_5end | ||
|id=chr13:111554995..111555009,- | |id=chr13:111554995..111555009,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.38e-08;33!CL:0002057;4.38e-08;33!CL:0000817;4.85e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.74e-09,42;CL:0002057,4.74e-09,42;CL:0000473,8.86e-08,48;CL:0000234,8.86e-08,48 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.83e-10;3!UBERON:0005425;4.85e-08;1 | |||
|ontology_enrichment_disease=DOID:162!6.20e-08!235;DOID:14566!7.84e-08!239 | |ontology_enrichment_disease=DOID:162!6.20e-08!235;DOID:14566!7.84e-08!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.70e-08;1!UBERON:0009842;1.70e-08;1!UBERON:0003704;1.70e-08;1!UBERON:0001171;1.70e-08;1!UBERON:0001172;1.70e-08;1!UBERON:0000941;4.85e-08;1!UBERON:0001785;4.85e-08;1!UBERON:0002464;4.85e-08;1!UBERON:0004904;4.85e-08;1!UBERON:0001021;4.85e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.77e-08,1;UBERON:0009842,1.77e-08,1;UBERON:0003704,1.77e-08,1;UBERON:0001171,1.77e-08,1;UBERON:0001172,1.77e-08,1;UBERON:0000941,4.40e-08,1;UBERON:0001785,4.40e-08,1;UBERON:0002464,4.40e-08,1;UBERON:0004904,4.40e-08,1;UBERON:0001021,4.40e-08,1;UBERON:0003902,4.40e-08,1;UBERON:0005425,4.40e-08,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0.286235987131057,0.410623275218653,0,0.305653622991805,0.410502947249729,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.309868802321207,0.995184627411951,0,0.553995408531877,1.80490002723128,0.868043482863407,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0,0.697287110717054,0.411167888021826,0.929119112685311,0.575384784644301,0,1.18241114944293,1.72372840368309,0.645484683583826,0,0.188242339542605,0.272906150057846,0.898893937780338,1.53041946185451,0.962787081228281,1.27867425159808,0,0.398927315243264,0,1.16083695451434,0,0,1.00499466102697,0.521482918420201,0.434377689410233,0.605399502633369,0.368277635987565,1.58231193720442,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.260118695119756,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.403213486449465,0.267440195783507,0,2.43806866313962,0,0,1.0843174571537,0.50133791063589,0,0,0.486634870302636,0.661743720148475,0.221729397462564,0.614843499851882,0.130979075497713,0.364295288292542,0,0.649094787309367,0.174129737299267,0.26591592103773,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0.354668382198357,0,0,0,0,0.67355336034844,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0.717558542755448,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0.772921620136887,0.37223371266318,0.337552664482532,0.194874010322397,0.252433774244115,0.184099797284599,0.323292113637624,0.355009592516614,0,0.169560592310488,0,0,0,0.121973706129595,0.397589304964456,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,1.39310378409594,0.721879481669586,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.352193736052904,0.621984346622316,0.144119953416961,0,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.289562613335158,0.821905290201534,0.179060963239896,0.112085143993527,0.788123040807709,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.831883446123229,0.535286966391485,0.788512075169673,0.117141414992713,0,0,0,0.664225598535437,0,0.260650843404249,0,0.343143423810856,0,0.647142602455851,0.213455115606889,0,0,0,0,0.460385919864187,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0,0,0.232420756919918,0.483437798366489,0.40101294060657,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0.206082023295445,0,0.247528499761764,0,0,0,0.193341436584244,0.770243085573222,0.460511024178389,0.275673144969061,0.429680979473094,0.435050081742686,0.170453254832202,0.356128142586949,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.855877976067841,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0.929015875628594,1.87549976869378,0.213425530045242,0.797131363644112,0,0,0.211673582723883,0.324621940274555,0.842391534340376,0.228234679033192,0.47003968731907,0,0,0,0.403599414382095,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,0.278406173895242,0,0,0,1.4098700508785,0.18714054040822,0,0,1.44876399560722,0,0,0,0,0,0.281338832821026,0.111308705022906,0.494411622680279,1.90012867315194,0.19924798825107,0,1.51159648712566,0.20453736500431,0.861593638227486,0,0.179736702294654,0,1.02314474045374,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0.762760950878299,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0,0.591095237907095,0,0.435753854075961,0.139423744278603,0.230850775511391,2.39278317278703,0,0.448788222048861,0.217294743844016,0.957003479195758,0.0915975934018623,1.06606955203727,0,0.156980256395025,0,0.225595660617181,0,0.167821586975843,0.569261198172555,0.476809736941136,0.210998064528027,0,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0.29652112868062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| ||
|short_description=p2@uc001vrq.2 | |short_description=p2@uc001vrq.2 | ||
}} | }} |
Latest revision as of 14:35, 24 July 2015
Short description: | p2@uc001vrq.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001vrq.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -280bp_to_uc001vrq.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.74e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.74e-09 | 42 |
defensive cell | 8.86e-08 | 48 |
phagocyte | 8.86e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.77e-08 | 1 |
acinus | 1.77e-08 | 1 |
intrahepatic bile duct | 1.77e-08 | 1 |
portal lobule | 1.77e-08 | 1 |
hepatic acinus | 1.77e-08 | 1 |
cranial nerve II | 4.40e-08 | 1 |
cranial nerve | 4.40e-08 | 1 |
nerve trunk | 4.40e-08 | 1 |
nerve connecting eye with brain | 4.40e-08 | 1 |
nerve | 4.40e-08 | 1 |
retinal neural layer | 4.40e-08 | 1 |
presumptive neural retina | 4.40e-08 | 1 |