FFCP PHASE1:Hg19::chr13:114554812..114554842,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:114554812..114554842,- | |||
|coexpression_cluster_id=C2252 | |||
|description=CAGE_peak_at_chr13:114554812..114554842,- | |||
|id=chr13:114554812..114554842,- | |||
|ontology_enrichment_celltype=CL:0000057!1.24e-10!75;CL:0002620!9.56e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.72e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.10e-14,76;CL:0002620,6.65e-09,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.55e-07;5!DOID:450;2.55e-07;5!DOID:66;2.55e-07;5!DOID:423;2.55e-07;5!DOID:0080000;2.55e-07;5!DOID:11722;2.55e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.68e-07,5;DOID:450,2.68e-07,5;DOID:66,2.68e-07,5;DOID:423,2.68e-07,5;DOID:0080000,2.68e-07,5;DOID:11722,2.68e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.47e-12!365;UBERON:0001049!3.22e-12!57;UBERON:0005068!3.22e-12!57;UBERON:0006241!3.22e-12!57;UBERON:0007135!3.22e-12!57;UBERON:0000033!4.73e-12!123;UBERON:0003102!1.18e-11!95;UBERON:0000153!1.87e-11!129;UBERON:0007811!1.87e-11!129;UBERON:0004121!2.25e-11!169;UBERON:0000062!2.89e-11!511;UBERON:0002020!4.94e-11!34;UBERON:0003528!4.94e-11!34;UBERON:0007023!1.15e-10!115;UBERON:0002780!1.60e-10!41;UBERON:0001890!1.60e-10!41;UBERON:0006240!1.60e-10!41;UBERON:0000924!1.92e-10!173;UBERON:0006601!1.92e-10!173;UBERON:0001893!2.28e-10!34;UBERON:0002791!2.28e-10!33;UBERON:0003075!2.98e-10!86;UBERON:0007284!2.98e-10!86;UBERON:0002616!4.27e-10!59;UBERON:0000468!4.75e-10!659;UBERON:0003080!6.79e-10!42;UBERON:0001869!9.43e-10!32;UBERON:0002346!5.48e-09!90;UBERON:0000955!6.71e-09!69;UBERON:0006238!6.71e-09!69;UBERON:0000480!1.98e-08!626;UBERON:0000467!2.60e-08!625;UBERON:0001017!2.65e-08!82;UBERON:0000073!4.59e-08!94;UBERON:0001016!4.59e-08!94;UBERON:0005743!4.95e-08!86;UBERON:0000956!5.59e-08!25;UBERON:0000203!5.59e-08!25;UBERON:0003056!2.17e-07!61;UBERON:0002619!3.64e-07!22;UBERON:0003101!5.55e-07!22;UBERON:0000079!5.55e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.56e-09;34!UBERON:0002020;6.56e-09;34!UBERON:0002791;1.98e-08;32!UBERON:0001869;2.68e-07;32!UBERON:0001893;3.33e-07;34!UBERON:0000956;3.58e-07;25!UBERON:0000203;3.58e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.05e-10,34;UBERON:0002020,5.05e-10,34;UBERON:0001049,7.30e-10,56;UBERON:0005068,7.30e-10,56;UBERON:0006241,7.30e-10,56;UBERON:0007135,7.30e-10,56;UBERON:0003102,3.52e-09,99;UBERON:0002791,5.36e-09,32;UBERON:0000073,1.97e-08,53;UBERON:0002616,1.97e-08,53;UBERON:0001893,4.01e-08,34;UBERON:0001869,7.69e-08,32;UBERON:0002780,1.95e-07,41;UBERON:0001890,1.95e-07,41;UBERON:0003080,1.95e-07,41;UBERON:0006240,1.95e-07,41;UBERON:0000956,5.93e-07,25;UBERON:0000203,5.93e-07,25;UBERON:0002199,8.14e-07,46;UBERON:0002416,8.14e-07,46;UBERON:0002097,8.34e-07,41 | |||
|phase1_expression=4.36028110249336,8.56402095563933,2.81908808191942,5.00366491765652,0,2.61701557230111,2.53299878168311,0,0,0,0,1.09220686065086,0.263766978228454,0,0.331397375727916,0,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0,0.572471974262113,1.50561867580173,2.63639543149086,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,1.79132379391939,0.647787332037959,1.28787783817093,0,0,0,0.697287110717054,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0,0.398927315243264,0,0,0,0,0.75374599577023,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,1.88300474649071,1.5905718941022,0.486634870302636,0.472674085820339,0.443458794925128,0.43917392846563,0.982343066232845,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,1.06366368415092,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,1.67360306382335,0,0,1.22031028774085,0,0,0.267899184852239,0,0,0,0,0,0,0,0,1.98788780678127,1.77282716330412,14.3001915278276,4.30254931123221,0.709336764396714,1.12135520028461,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.702254033511242,0.816616685019573,2.94802361548243,0.723280468230358,3.56400857184616,3.70900393917835,0,0,1.5150250255866,1.00094815897571,1.93944880838928,2.19488810440419,4.29082914118628,1.35214253015937,0.113432183160021,12.1984952268426,13.4541154955697,13.3517097730524,6.30191301777245,5.46178404963726,5.66809188100384,3.16398655763703,12.9957775825775,2.04617710838517,15.398460228891,10.4936884452221,0.969876340912871,8.87523981291536,2.51880245569101,3.39121184620975,0.193260853163297,3.81844568827169,1.43402297694502,0.365921118388786,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,1.28648187638577,0,3.71494342425583,1.44375896333917,0,0.168584690078102,0,0.55146986366197,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,2.58275720940538,0.343135620597051,0.548751427043128,0,1.40740561376283,0.740707561268237,0.325808305310325,0,0,0.695582429850461,0,0.288732895522148,0,0,0,0,1.47730203652438,0,0.148631162288728,1.87467667973554,0.671928512795438,1.41775097242386,0.985143749731331,1.74380363108377,0,0,0,0,0.144119953416961,0,0.444485260045183,0,0,0,0.308482478109971,0,0,0,0,0.1466765716419,2.45616259939778,0,0.845302752556,0.531876233169741,0,0.514414748524284,0,0,1.71573592389777,1.08524321078289,0.823240336780769,0,0.355391948742546,0,1.20575750823834,0,2.89921674427965,0,0,0,0.958499421966331,1.14861935834114,0,4.48822050669496,0.821905290201534,5.01370697071708,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0.542530047399471,1.45579603071565,3.56857977594324,2.83864347061082,1.40569697991256,0,0,0,1.99267679560631,0.184369168541703,4.60483156680839,0,0,0,0,0.106727557803444,0,0,0,6.20269519546942,16.8808170616869,4.77122160536225,4.74114852246094,5.11707249066703,6.27330292460069,0,1.54209693802656,0,0.739144404124282,0,0.348631135379878,2.65890789101569,3.40860999515584,2.20994373446151,1.03333003348146,2.91345868810747,0.786746489756545,0,0.385076685522074,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0,1.31205858279882,0,0.103041011647722,0,0.082509499920588,0,0,1.6068392984416,0.48335359146061,0.308097234229289,0,0.413509717453592,3.33002759091648,3.19036726611303,1.02271952899321,0.890320356467374,1.15699440752685,0.576570202095319,14.2926237993934,1.4162089319777,0,9.75918275174984,0,0,0,0,0,0,0,1.58189712359363,1.33441135746677,0.255897791311334,0,0,0,2.15846949099978,1.64722217841633,1.06031162111118,0,0,0,1.46290121726877,0.731140468893853,0,0.9554993798559,0.989838023675989,0,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,1.00387946542836,0.491245205065606,0,0.354761064070598,0.422215270595328,1.31717957183961,0,0,0,0,0,0.470719003883896,0,0,0.443430153536676,1.37834040124176,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0.106824071127473,0.962479855263359,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4452926759333,1.61439765752838,0,0,1.53620382154229,1.3420566473545,0.500547425135725,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0.242721043499027,0,0.284136146806413,2.14870036263921,0,0.921482106297696,0.994147647766298,2.81338832821025,0.779160935160341,0,0.844501632511974,2.39097585901284,0.828851746593443,0,0.20453736500431,0,8.70910845453061,1.97710372524119,0.179021174675609,1.02314474045374,0.887790650732402,0,3.33410970433911,0.969332746095218,0.556608588971108,0,0,0,0,0.796554137998498,0,0,0.689486746482929,0,0.694499979733169,1.77148277162768,1.80894657938112,1.52581736317083,3.75969483766164,0.591095237907095,0,0,0.139423744278603,1.61595542857974,0.91153644677601,0,1.07709173291727,0.217294743844016,0.638002319463839,0.549585560411174,0,0,0,0,0,0.19606253431774,0.335643173951685,0.37950746544837,0,0.421996129056054,0,0.141353071433941,0,0,0.619202951523374,0.611030144933625,0,0,0,0.67401132980677,0.802577647298789,0.234264445725339,0,0,0,2.36750641709634,0,0.61214552326098,1.51647791108371,0.150323419414493,0.207376382794494,0,0,0,0,0,0.832048038078832,0,0.979923974143776,0.174118413160805,0.52418000472609,0.687944129886466,0.387025325156341,0.219267951258557,0.0821154570532092,0.387956065953678,0.176512253383001,0.451961481561065,1.91858694505451,0.19871461170299,1.2029051231617,0.977756913674015,0.881747022766871,0.640358984218058,0.19980960958213,0.288180834308212,0.458146384663663,0,1.87271237384595,0.248505071130865,0.471388069233591,0.135904206073614,0.313808538937,0.203996435272644,0.866851769704557,0.600420288709789,2.32739144116388,0,2.57859264851974,0,3.6306712165393,7.33313356837388,0.717873024576814,0.798716001995964,0,0,2.21705459206197,4.68389848605125,0,0,0,0,0.0984274815147488,0,1.59045937961861,3.54128855890097,0,0.137539436597234,0,0.2249738915515,1.5476039091159,0.850493793212345,1.0063040627978,0.315222829196793,0.472091293214983,1.5840050477911,0.179287339332845,0.575745591958336,0.714695326373367,1.32418394073086,0.5085370753095,0,1.72844298240254,1.63293680054705,1.19730191562487,0,1.70388021785422,0.226624183040251,0.293104467356165,0,1.42211251997706,1.98348902614035,0,0.704815022316672,0.213574825135389,1.72924735609633,0.828478110694391,0,0.592834895693833,0,2.55336503108073,0,0.2506898940227,0,0,0,3.54427271986794,1.83039397352945,2.1282458220105,0,2.66229723688445,0.931446044120752,0,0,0,0.285465333544967,0.470531639396343,0.468334905806882,0.144921028610825,0.447764408660622,0.701139929541673,0,2.84104507912634,3.52195062453605,1.77962244319307,0.228840068396924,1.20984739010591,0.310874401165561,0.147855149989634,1.27437413730962,0,0,0,1.86089200190596,4.69570555630561,0.150257608997218,11.8049615772327,0.813741466409323,1.27294061441792,0.429642228169954,2.32016879939247,13.5352602157529,2.40016658797892,1.37358282073117,1.01024846629776,0,0.57785949122191,1.07220795687463,0,3.40058888268409,3.93588206350518,2.69210374957114,3.58177682162975,0,2.41212454536578,5.83074181621407,6.36616326294019,0.506827321959218,0.76872455576384,0,0,4.14775308455192,0.389720617678777,0.265729680626726,0.327130788511688,0.327609848846413,0.245772908753719,0.845248493434508,0,0,1.72214979660816,0.567515953566836,1.28874165176289,0.279759015438889,0,0.383683113910955,0,0.471797825567689,0.764467467344097,0,0,0.123935764259002,0,0.636008701306837,0,0,0.705351887381368,1.2249819094128,0.770750701157514,4.25089728976755,2.71377560397157,0.41023272848151,1.00828678488687,0.622415272177961,0.968853873791107,0,0.392590874004102,0.353909170043221,0.733714394086716,0.693153996902029,0.762764190934334,0,0.198916222116275,0.225630985047772,1.61364054962816,1.56302802246618,0.261906694481422,0.163771917510097,2.06998520703863,0.540300676947157,2.34323429584154,4.34042272652487,1.01465296310251,1.09394961803644,0,1.48863353516788,0,0.127762427639595,0,0.336283722218824,0.606965604236632,2.50428410486427,0.0887023701626388,0.115233987555779,2.40083213212386,1.97112225632812,0.394636641377094,1.18193840883968,0.222462803784138,0.78493092850514,2.04250266890802,0,0,0,0.9555033757741,1.00067161847319,0.790068058663633,0,0,0.801711364730253,0.207216164163037,3.0729325876911,2.07377898544228,0.860454717640555,3.0766320189947,3.8346032141621,2.9637093513365,0.22910686854405,0,0,0,0.687051635306701,0.121917924982269,1.29485767437579,0.307988420568741,0,0.485710993059139,0,0.198950775161368,0.237840181555137,0,0,0,0.308696632431779,0.655678681511872,0,2.20633489578515,0,1.57046773691956,4.75274240523338,1.2679671827502,3.56846940844415,0,0.128915775947154,0,0,0,0,0,1.83491713361816,4.15684791139209,0.788857810965923,0.407948941145488,0.436350690340377,0.5290268405154,7.43990036333503,1.38652688589425,2.59575937274273,0.126166424835079,0.109265571963696,0.126698501011437,2.03977659483963,0.26721740526556,1.56221329209236,0.752122617877125,0.606229585745915,1.87574891109325,0.829169439458779,2.79269088827117,1.0661699095049,0.23806443146374,0.0645889098360061,0.496597714366863,3.13969215225718,0.572824424503484,1.0105859447911,0.870866991587845,0,0.336760265072938,0.358611026963382,0,0.569822880276821,0.320182037633146,0,0,2.34640942403454,1.4668973301944,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p@chr13:114554812..114554842,- | |||
}} |
Latest revision as of 14:50, 24 July 2015
Short description: | p@chr13:114554812..114554842, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114554812..114554842, - |
Coexpression cluster: | C2252_Preadipocyte_Fibroblast_Small_mesenchymal_Smooth_mesothelioma_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.10e-14 | 76 |
skin fibroblast | 6.65e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 5.05e-10 | 34 |
gray matter | 5.05e-10 | 34 |
neural tube | 7.30e-10 | 56 |
neural rod | 7.30e-10 | 56 |
future spinal cord | 7.30e-10 | 56 |
neural keel | 7.30e-10 | 56 |
surface structure | 3.52e-09 | 99 |
regional part of telencephalon | 5.36e-09 | 32 |
regional part of nervous system | 1.97e-08 | 53 |
regional part of brain | 1.97e-08 | 53 |
telencephalon | 4.01e-08 | 34 |
cerebral hemisphere | 7.69e-08 | 32 |
regional part of forebrain | 1.95e-07 | 41 |
forebrain | 1.95e-07 | 41 |
anterior neural tube | 1.95e-07 | 41 |
future forebrain | 1.95e-07 | 41 |
cerebral cortex | 5.93e-07 | 25 |
pallium | 5.93e-07 | 25 |
integument | 8.14e-07 | 46 |
integumental system | 8.14e-07 | 46 |
skin of body | 8.34e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.68e-07 | 5 |
myotonic disease | 2.68e-07 | 5 |
muscle tissue disease | 2.68e-07 | 5 |
myopathy | 2.68e-07 | 5 |
muscular disease | 2.68e-07 | 5 |
myotonic dystrophy | 2.68e-07 | 5 |