FFCP PHASE1:Hg19::chr13:42265559..42265609,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:42265559..42265609,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr13:42265559..42265609,- | |description=CAGE_peak_at_chr13:42265559..42265609,- | ||
|id=chr13:42265559..42265609,- | |id=chr13:42265559..42265609,- | ||
|ontology_enrichment_celltype=CL:0000048!7.96e-20!430;CL:0000723!8.04e-19!436;CL:0000680!1.66e-18!57;CL:0000056!1.66e-18!57;CL:0000355!1.66e-18!57;CL:0000034!1.55e-17!444;CL:0000187!2.37e-17!54;CL:0000055!7.62e-17!180;CL:0000183!1.18e-14!59;CL:0000393!3.55e-14!60;CL:0000211!3.55e-14!60;CL:0000359!2.87e-13!32;CL:0000192!2.51e-12!42;CL:0000514!2.51e-12!42;CL:0002057!1.07e-11!42;CL:0002371!1.06e-10!591;CL:0000144!2.11e-10!625;CL:0000860!2.98e-10!45;CL:0002334!4.54e-10!12;CL:0000057!1.61e-09!75;CL:0000134!1.81e-08!358;CL:0002320!5.07e-08!365;CL:0002494!6.60e-08!16;CL:0000136!1.13e-07!15;CL:0000548!1.63e-07!679;CL:0000004!1.63e-07!679;CL:0000255!1.63e-07!679;CL:0002194!2.61e-07!63;CL:0000576!2.61e-07!63;CL:0000040!2.61e-07!63;CL:0000559!2.61e-07!63;CL:0000012!3.13e-07!682;CL:0002009!8.49e-07!65 | |ontology_enrichment_celltype=CL:0000048!7.96e-20!430;CL:0000723!8.04e-19!436;CL:0000680!1.66e-18!57;CL:0000056!1.66e-18!57;CL:0000355!1.66e-18!57;CL:0000034!1.55e-17!444;CL:0000187!2.37e-17!54;CL:0000055!7.62e-17!180;CL:0000183!1.18e-14!59;CL:0000393!3.55e-14!60;CL:0000211!3.55e-14!60;CL:0000359!2.87e-13!32;CL:0000192!2.51e-12!42;CL:0000514!2.51e-12!42;CL:0002057!1.07e-11!42;CL:0002371!1.06e-10!591;CL:0000144!2.11e-10!625;CL:0000860!2.98e-10!45;CL:0002334!4.54e-10!12;CL:0000057!1.61e-09!75;CL:0000134!1.81e-08!358;CL:0002320!5.07e-08!365;CL:0002494!6.60e-08!16;CL:0000136!1.13e-07!15;CL:0000548!1.63e-07!679;CL:0000004!1.63e-07!679;CL:0000255!1.63e-07!679;CL:0002194!2.61e-07!63;CL:0000576!2.61e-07!63;CL:0000040!2.61e-07!63;CL:0000559!2.61e-07!63;CL:0000012!3.13e-07!682;CL:0002009!8.49e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.52e-16;32!CL:0000860;4.06e-16;33!CL:0002057;4.06e-16;33!CL:0000473;3.51e-12;39!CL:0000234;3.51e-12;39!CL:0002334;1.32e-10;12!CL:0002570;1.83e-09;8!CL:0002494;4.35e-09;16!CL:0000192;1.42e-08;43!CL:0000187;7.38e-08;55!CL:0002539;8.55e-08;10!CL:0000723;1.71e-07;61!CL:0000576;3.66e-07;48!CL:0000134;8.30e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.83e-23,427;CL:0000723,9.46e-23,433;CL:0000034,7.89e-22,441;CL:0000359,4.05e-17,32;CL:0000187,4.33e-14,55;CL:0000680,5.64e-13,58;CL:0000056,5.64e-13,58;CL:0000355,5.64e-13,58;CL:0000860,7.33e-13,42;CL:0002057,7.33e-13,42;CL:0000134,1.99e-12,354;CL:0000393,5.61e-12,61;CL:0000211,5.61e-12,61;CL:0002320,8.83e-12,361;CL:0000473,1.14e-11,48;CL:0000234,1.14e-11,48;CL:0000192,3.01e-11,43;CL:0000514,3.01e-11,43;CL:0002334,1.07e-10,12;CL:0000219,1.54e-09,386;CL:0002570,2.14e-09,8;CL:0002494,4.66e-09,16;CL:0002194,3.70e-08,59;CL:0000576,3.70e-08,59;CL:0000040,3.70e-08,59;CL:0000559,3.70e-08,59;CL:0002539,9.47e-08,10;CL:0002009,1.03e-07,61;CL:0000057,1.75e-07,76;CL:0000839,9.80e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;5.73e-10;42!CL:0000514;1.42e-08;43!CL:0000355;2.01e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!8.76e-12!14 | |ontology_enrichment_disease=DOID:2394!8.76e-12!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.11e-20;14!DOID:120;1.25e-08;27!DOID:193;8.34e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.89e-20,14;DOID:120,1.22e-08,27;DOID:193,8.19e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.62e-19!167;UBERON:0004290!2.89e-17!70;UBERON:0001134!3.16e-17!61;UBERON:0002036!3.16e-17!61;UBERON:0003082!3.16e-17!61;UBERON:0002385!5.15e-17!63;UBERON:0001015!5.15e-17!63;UBERON:0000383!5.15e-17!63;UBERON:0000914!3.11e-14!83;UBERON:0002329!3.11e-14!83;UBERON:0003077!3.11e-14!83;UBERON:0003059!3.11e-14!83;UBERON:0007282!3.11e-14!83;UBERON:0009618!3.11e-14!83;UBERON:0007285!3.11e-14!83;UBERON:0000486!6.95e-14!82;UBERON:0004872!5.33e-13!84;UBERON:0001637!2.72e-11!42;UBERON:0003509!2.72e-11!42;UBERON:0004572!2.72e-11!42;UBERON:0004573!7.17e-11!33;UBERON:0004571!7.17e-11!33;UBERON:0000948!6.91e-10!24;UBERON:0005498!6.91e-10!24;UBERON:0004140!6.91e-10!24;UBERON:0009881!6.91e-10!24;UBERON:0004141!6.91e-10!24;UBERON:0003084!6.91e-10!24;UBERON:0007005!6.91e-10!24;UBERON:0004139!6.91e-10!24;UBERON:0004291!6.91e-10!24;UBERON:0001981!3.65e-09!60;UBERON:0007500!3.65e-09!60;UBERON:0004537!3.65e-09!60;UBERON:0006965!3.65e-09!60;UBERON:0003081!3.56e-08!216;UBERON:0007100!4.35e-08!27;UBERON:0002384!5.41e-08!375;UBERON:0004535!7.51e-08!110;UBERON:0000926!7.69e-08!448;UBERON:0004120!7.69e-08!448;UBERON:0006603!7.69e-08!448;UBERON:0000055!2.78e-07!69;UBERON:0001009!2.84e-07!113;UBERON:0002049!4.23e-07!79;UBERON:0007798!4.23e-07!79;UBERON:0001013!9.53e-07!14 | |ontology_enrichment_uberon=UBERON:0002204!1.62e-19!167;UBERON:0004290!2.89e-17!70;UBERON:0001134!3.16e-17!61;UBERON:0002036!3.16e-17!61;UBERON:0003082!3.16e-17!61;UBERON:0002385!5.15e-17!63;UBERON:0001015!5.15e-17!63;UBERON:0000383!5.15e-17!63;UBERON:0000914!3.11e-14!83;UBERON:0002329!3.11e-14!83;UBERON:0003077!3.11e-14!83;UBERON:0003059!3.11e-14!83;UBERON:0007282!3.11e-14!83;UBERON:0009618!3.11e-14!83;UBERON:0007285!3.11e-14!83;UBERON:0000486!6.95e-14!82;UBERON:0004872!5.33e-13!84;UBERON:0001637!2.72e-11!42;UBERON:0003509!2.72e-11!42;UBERON:0004572!2.72e-11!42;UBERON:0004573!7.17e-11!33;UBERON:0004571!7.17e-11!33;UBERON:0000948!6.91e-10!24;UBERON:0005498!6.91e-10!24;UBERON:0004140!6.91e-10!24;UBERON:0009881!6.91e-10!24;UBERON:0004141!6.91e-10!24;UBERON:0003084!6.91e-10!24;UBERON:0007005!6.91e-10!24;UBERON:0004139!6.91e-10!24;UBERON:0004291!6.91e-10!24;UBERON:0001981!3.65e-09!60;UBERON:0007500!3.65e-09!60;UBERON:0004537!3.65e-09!60;UBERON:0006965!3.65e-09!60;UBERON:0003081!3.56e-08!216;UBERON:0007100!4.35e-08!27;UBERON:0002384!5.41e-08!375;UBERON:0004535!7.51e-08!110;UBERON:0000926!7.69e-08!448;UBERON:0004120!7.69e-08!448;UBERON:0006603!7.69e-08!448;UBERON:0000055!2.78e-07!69;UBERON:0001009!2.84e-07!113;UBERON:0002049!4.23e-07!79;UBERON:0007798!4.23e-07!79;UBERON:0001013!9.53e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.87e-14;33!UBERON:0004571;1.87e-14;33!UBERON:0001013;9.46e-12;14!UBERON:0001637;1.04e-10;42!UBERON:0003509;1.04e-10;42!UBERON:0004572;1.04e-10;42!UBERON:0000992;5.18e-10;13!UBERON:0002118;2.72e-09;5!UBERON:0002119;8.40e-08;4!UBERON:0004237;8.55e-08;10!UBERON:0004695;8.55e-08;10!UBERON:0002111;8.55e-08;10!UBERON:0004178;8.55e-08;10!UBERON:0003688;2.15e-07;6!UBERON:0002358;2.15e-07;6!UBERON:0003684;2.15e-07;6!UBERON:0001178;2.15e-07;6!UBERON:0000947;2.29e-07;21!UBERON:0010191;2.29e-07;21!UBERON:0000991;6.99e-07;21 | |||
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| ||
|short_description=p@chr13:42265559..42265609,- | |short_description=p@chr13:42265559..42265609,- | ||
}} | }} |
Latest revision as of 16:04, 24 July 2015
Short description: | p@chr13:42265559..42265609, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:42265559..42265609, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.83e-23 | 427 |
somatic stem cell | 9.46e-23 | 433 |
stem cell | 7.89e-22 | 441 |
vascular associated smooth muscle cell | 4.05e-17 | 32 |
muscle cell | 4.33e-14 | 55 |
muscle precursor cell | 5.64e-13 | 58 |
myoblast | 5.64e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.64e-13 | 58 |
classical monocyte | 7.33e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.33e-13 | 42 |
mesenchymal cell | 1.99e-12 | 354 |
electrically responsive cell | 5.61e-12 | 61 |
electrically active cell | 5.61e-12 | 61 |
connective tissue cell | 8.83e-12 | 361 |
defensive cell | 1.14e-11 | 48 |
phagocyte | 1.14e-11 | 48 |
smooth muscle cell | 3.01e-11 | 43 |
smooth muscle myoblast | 3.01e-11 | 43 |
preadipocyte | 1.07e-10 | 12 |
motile cell | 1.54e-09 | 386 |
mesenchymal stem cell of adipose | 2.14e-09 | 8 |
cardiocyte | 4.66e-09 | 16 |
monopoietic cell | 3.70e-08 | 59 |
monocyte | 3.70e-08 | 59 |
monoblast | 3.70e-08 | 59 |
promonocyte | 3.70e-08 | 59 |
aortic smooth muscle cell | 9.47e-08 | 10 |
macrophage dendritic cell progenitor | 1.03e-07 | 61 |
fibroblast | 1.75e-07 | 76 |
myeloid lineage restricted progenitor cell | 9.80e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.89e-20 | 14 |
female reproductive organ cancer | 1.22e-08 | 27 |
reproductive organ cancer | 8.19e-08 | 29 |