FFCP PHASE1:Hg19::chr13:42265559..42265609,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:42265559..42265609,- to FFCP PHASE1:Hg19::chr13:42265559..42265609,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:42265559..42265609,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr13:42265559..42265609,- | |||
|id=chr13:42265559..42265609,- | |||
|ontology_enrichment_celltype=CL:0000048!7.96e-20!430;CL:0000723!8.04e-19!436;CL:0000680!1.66e-18!57;CL:0000056!1.66e-18!57;CL:0000355!1.66e-18!57;CL:0000034!1.55e-17!444;CL:0000187!2.37e-17!54;CL:0000055!7.62e-17!180;CL:0000183!1.18e-14!59;CL:0000393!3.55e-14!60;CL:0000211!3.55e-14!60;CL:0000359!2.87e-13!32;CL:0000192!2.51e-12!42;CL:0000514!2.51e-12!42;CL:0002057!1.07e-11!42;CL:0002371!1.06e-10!591;CL:0000144!2.11e-10!625;CL:0000860!2.98e-10!45;CL:0002334!4.54e-10!12;CL:0000057!1.61e-09!75;CL:0000134!1.81e-08!358;CL:0002320!5.07e-08!365;CL:0002494!6.60e-08!16;CL:0000136!1.13e-07!15;CL:0000548!1.63e-07!679;CL:0000004!1.63e-07!679;CL:0000255!1.63e-07!679;CL:0002194!2.61e-07!63;CL:0000576!2.61e-07!63;CL:0000040!2.61e-07!63;CL:0000559!2.61e-07!63;CL:0000012!3.13e-07!682;CL:0002009!8.49e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.52e-16;32!CL:0000860;4.06e-16;33!CL:0002057;4.06e-16;33!CL:0000473;3.51e-12;39!CL:0000234;3.51e-12;39!CL:0002334;1.32e-10;12!CL:0002570;1.83e-09;8!CL:0002494;4.35e-09;16!CL:0000192;1.42e-08;43!CL:0000187;7.38e-08;55!CL:0002539;8.55e-08;10!CL:0000723;1.71e-07;61!CL:0000576;3.66e-07;48!CL:0000134;8.30e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.83e-23,427;CL:0000723,9.46e-23,433;CL:0000034,7.89e-22,441;CL:0000359,4.05e-17,32;CL:0000187,4.33e-14,55;CL:0000680,5.64e-13,58;CL:0000056,5.64e-13,58;CL:0000355,5.64e-13,58;CL:0000860,7.33e-13,42;CL:0002057,7.33e-13,42;CL:0000134,1.99e-12,354;CL:0000393,5.61e-12,61;CL:0000211,5.61e-12,61;CL:0002320,8.83e-12,361;CL:0000473,1.14e-11,48;CL:0000234,1.14e-11,48;CL:0000192,3.01e-11,43;CL:0000514,3.01e-11,43;CL:0002334,1.07e-10,12;CL:0000219,1.54e-09,386;CL:0002570,2.14e-09,8;CL:0002494,4.66e-09,16;CL:0002194,3.70e-08,59;CL:0000576,3.70e-08,59;CL:0000040,3.70e-08,59;CL:0000559,3.70e-08,59;CL:0002539,9.47e-08,10;CL:0002009,1.03e-07,61;CL:0000057,1.75e-07,76;CL:0000839,9.80e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;5.73e-10;42!CL:0000514;1.42e-08;43!CL:0000355;2.01e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!8.76e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.11e-20;14!DOID:120;1.25e-08;27!DOID:193;8.34e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.89e-20,14;DOID:120,1.22e-08,27;DOID:193,8.19e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.62e-19!167;UBERON:0004290!2.89e-17!70;UBERON:0001134!3.16e-17!61;UBERON:0002036!3.16e-17!61;UBERON:0003082!3.16e-17!61;UBERON:0002385!5.15e-17!63;UBERON:0001015!5.15e-17!63;UBERON:0000383!5.15e-17!63;UBERON:0000914!3.11e-14!83;UBERON:0002329!3.11e-14!83;UBERON:0003077!3.11e-14!83;UBERON:0003059!3.11e-14!83;UBERON:0007282!3.11e-14!83;UBERON:0009618!3.11e-14!83;UBERON:0007285!3.11e-14!83;UBERON:0000486!6.95e-14!82;UBERON:0004872!5.33e-13!84;UBERON:0001637!2.72e-11!42;UBERON:0003509!2.72e-11!42;UBERON:0004572!2.72e-11!42;UBERON:0004573!7.17e-11!33;UBERON:0004571!7.17e-11!33;UBERON:0000948!6.91e-10!24;UBERON:0005498!6.91e-10!24;UBERON:0004140!6.91e-10!24;UBERON:0009881!6.91e-10!24;UBERON:0004141!6.91e-10!24;UBERON:0003084!6.91e-10!24;UBERON:0007005!6.91e-10!24;UBERON:0004139!6.91e-10!24;UBERON:0004291!6.91e-10!24;UBERON:0001981!3.65e-09!60;UBERON:0007500!3.65e-09!60;UBERON:0004537!3.65e-09!60;UBERON:0006965!3.65e-09!60;UBERON:0003081!3.56e-08!216;UBERON:0007100!4.35e-08!27;UBERON:0002384!5.41e-08!375;UBERON:0004535!7.51e-08!110;UBERON:0000926!7.69e-08!448;UBERON:0004120!7.69e-08!448;UBERON:0006603!7.69e-08!448;UBERON:0000055!2.78e-07!69;UBERON:0001009!2.84e-07!113;UBERON:0002049!4.23e-07!79;UBERON:0007798!4.23e-07!79;UBERON:0001013!9.53e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.87e-14;33!UBERON:0004571;1.87e-14;33!UBERON:0001013;9.46e-12;14!UBERON:0001637;1.04e-10;42!UBERON:0003509;1.04e-10;42!UBERON:0004572;1.04e-10;42!UBERON:0000992;5.18e-10;13!UBERON:0002118;2.72e-09;5!UBERON:0002119;8.40e-08;4!UBERON:0004237;8.55e-08;10!UBERON:0004695;8.55e-08;10!UBERON:0002111;8.55e-08;10!UBERON:0004178;8.55e-08;10!UBERON:0003688;2.15e-07;6!UBERON:0002358;2.15e-07;6!UBERON:0003684;2.15e-07;6!UBERON:0001178;2.15e-07;6!UBERON:0000947;2.29e-07;21!UBERON:0010191;2.29e-07;21!UBERON:0000991;6.99e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.58e-16,33;UBERON:0004571,1.58e-16,33;UBERON:0001637,6.35e-16,42;UBERON:0003509,6.35e-16,42;UBERON:0004572,6.35e-16,42;UBERON:0002204,7.18e-15,167;UBERON:0000926,3.80e-13,315;UBERON:0004120,3.80e-13,315;UBERON:0006603,3.80e-13,315;UBERON:0004872,1.72e-12,83;UBERON:0002384,5.48e-12,371;UBERON:0001013,9.71e-12,14;UBERON:0001134,1.15e-11,62;UBERON:0002036,1.15e-11,62;UBERON:0003082,1.15e-11,62;UBERON:0002385,4.44e-11,64;UBERON:0001015,4.44e-11,64;UBERON:0000383,4.44e-11,64;UBERON:0002329,4.49e-11,71;UBERON:0003059,4.49e-11,71;UBERON:0007282,4.49e-11,71;UBERON:0004290,4.49e-11,71;UBERON:0009618,4.49e-11,71;UBERON:0003077,8.15e-11,72;UBERON:0007285,8.15e-11,72;UBERON:0007524,1.45e-10,73;UBERON:0003081,1.72e-10,203;UBERON:0000992,5.19e-10,13;UBERON:0007500,1.84e-09,59;UBERON:0001981,1.84e-09,59;UBERON:0004537,1.84e-09,59;UBERON:0006965,1.84e-09,59;UBERON:0007503,2.06e-09,78;UBERON:0002118,2.33e-09,5;UBERON:0000486,3.08e-09,83;UBERON:0004535,1.16e-08,109;UBERON:0000055,3.20e-08,68;UBERON:0001009,3.34e-08,112;UBERON:0002049,8.79e-08,78;UBERON:0007798,8.79e-08,78;UBERON:0004237,9.47e-08,10;UBERON:0004695,9.47e-08,10;UBERON:0002111,9.47e-08,10;UBERON:0004178,9.47e-08,10;UBERON:0002119,9.86e-08,4;UBERON:0003914,1.64e-07,117;UBERON:0000947,2.33e-07,21;UBERON:0010191,2.33e-07,21;UBERON:0003688,2.41e-07,6;UBERON:0002358,2.41e-07,6;UBERON:0003684,2.41e-07,6;UBERON:0001178,2.41e-07,6;UBERON:0000991,6.98e-07,21;UBERON:0009196,6.98e-07,21;UBERON:0009117,6.98e-07,21;UBERON:0005564,6.98e-07,21 | |||
|phase1_expression=1.63510541343501,0.856402095563933,5.63817616383885,2.00146596706261,0.893922188854576,2.61701557230111,2.53299878168311,0,0,1.47440361900905,0,0,0,0,0,2.01697543935533,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,1.62700325833979,0,1.85823822537062,33.9477022940138,33.044731142254,53.4449839548203,1.03423704220986,0.645484683583826,1.35426486594342,0.752969358170419,0.545812300115692,1.79778787556068,1.83650335422542,0.320929027076094,0.639337125799041,5.27762080298746,9.77371922345996,9.37694451171927,3.48251086354301,6.24123747160254,4.9825779919646,28.8935965045255,29.2030434315313,49.7362454374717,3.63239701580021,4.78760926783834,10.1267963981083,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,11.4019146149618,1.66221330396589,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,1.8994576749687,5.95841313659485,2.58152958673932,1.06400514659507,0.560677600142307,2.1349799145941,0,0,2.15537075311501,0.163461903113459,0,0,0,0,0,0.298897361103602,0.352303495931295,0.161872944368132,0,0,0,0.206651562351531,0,1.48360157567134,0,2.15585442544872,0,0,0,0,0.612975591598039,2.70428506031874,0.226864366320042,0,1.06778694409284,3.81477422087211,0,0.412210116953756,2.57640540045629,0.744467425326359,0.506328996723799,3.70260619612555,0.504867548488229,3.22174645248048,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,2.23038153388083,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,2.22946743433092,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29271715757778,0,5.071816515336,0,0,0,0,0,0,0,0,4.23457039581856,0,0.791951872933429,11.4546963282643,33.1182714268112,8.39773125929279,0,0.502257091432126,0,0,0,0,0.144781306667579,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.623912584592421,0.356857977594324,0.630809660135739,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,31.2615837851659,5.21770709179412,14.0330047216537,42.0296409558699,4.60536524160033,4.82561763430822,2.96836132889982,0.925258162815933,2.66342587969691,0.246381468041427,2.59627214591811,0.232420756919918,0,0,2.67034867914099,0.459257792658427,0,0.131124414959424,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,7.14241825583079,12.7889724876911,0,0.650060246036521,28.9231073719487,0.676695028044854,0.308097234229289,0.307007349452259,3.85942402956686,1.28904293841928,1.16013355131383,0.426133137080504,0.178064071293475,0.826424576804891,0.192190067365106,0.382838137483752,1.0115778085555,6.04299214086472,7.24068397710472,3.485186350803,3.69640296211307,10.1138145760234,6.08953094452551,4.07713282028624,30.3424759893021,0,0,1.14378116354295,0,0,0.318203247925937,16.4839214441838,0.539617372749944,0.54907405947211,0.471249609382746,8.49166422607927,0,16.0078213370813,0,24.3713489631284,8.45201174054043,0.409499734223957,0,3.39024349860728,0,25.8741200344076,19.7302898364193,0,0,3.65238678532867,0.92947049429925,0,0.286822704408103,0.0982490410131212,1.07001315444375,0.709522128141196,0.211107635297664,3.62224382255892,0,0.349934720244983,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.140669416410513,25.3783847452225,0.16480387422676,0,0,0,0,0,0,1.86623752597084,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48124672601102,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,3.60299883542404,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.533937062838473,0,0.828478110694391,0,0,0,0,0.544017803369474,0.5013797880454,2.45076461410769,1.31149052283922,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,4.92540849526684,26.6433173225836,1.66441758450784,0.757612021100357,0.251567901752575,0.889811221596536,5.94984177832001,0.907385542579434,4.35224161631785,21.8825621984658,9.07991572833104,13.4940933649081,8.38419967131801,3.31764966272684,17.5455531608277,7.82617592717601,6.91185001387205,13.7089876380766,9.76489759691188,1.81848659202559,16.2189941134158,14.3850465562333,12.3409725496571,0,2.40376993627955,1.010248466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| ||
|short_description=p@chr13:42265559..42265609,- | |||
}} | }} |
Latest revision as of 16:04, 24 July 2015
Short description: | p@chr13:42265559..42265609, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:42265559..42265609, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.83e-23 | 427 |
somatic stem cell | 9.46e-23 | 433 |
stem cell | 7.89e-22 | 441 |
vascular associated smooth muscle cell | 4.05e-17 | 32 |
muscle cell | 4.33e-14 | 55 |
muscle precursor cell | 5.64e-13 | 58 |
myoblast | 5.64e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.64e-13 | 58 |
classical monocyte | 7.33e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.33e-13 | 42 |
mesenchymal cell | 1.99e-12 | 354 |
electrically responsive cell | 5.61e-12 | 61 |
electrically active cell | 5.61e-12 | 61 |
connective tissue cell | 8.83e-12 | 361 |
defensive cell | 1.14e-11 | 48 |
phagocyte | 1.14e-11 | 48 |
smooth muscle cell | 3.01e-11 | 43 |
smooth muscle myoblast | 3.01e-11 | 43 |
preadipocyte | 1.07e-10 | 12 |
motile cell | 1.54e-09 | 386 |
mesenchymal stem cell of adipose | 2.14e-09 | 8 |
cardiocyte | 4.66e-09 | 16 |
monopoietic cell | 3.70e-08 | 59 |
monocyte | 3.70e-08 | 59 |
monoblast | 3.70e-08 | 59 |
promonocyte | 3.70e-08 | 59 |
aortic smooth muscle cell | 9.47e-08 | 10 |
macrophage dendritic cell progenitor | 1.03e-07 | 61 |
fibroblast | 1.75e-07 | 76 |
myeloid lineage restricted progenitor cell | 9.80e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.89e-20 | 14 |
female reproductive organ cancer | 1.22e-08 | 27 |
reproductive organ cancer | 8.19e-08 | 29 |