FFCP PHASE1:Hg19::chr14:106725347..106725368,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AF460666,AF460671,AF460672,AF460678,AF460691,AF460699,AF460700,AF460800,DQ454508,U64467_5end | |||
|cluster_id=chr14:106725347..106725368,- | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_1_at_AF460666_5end,CAGE_peak_1_at_AF460671_5end,CAGE_peak_1_at_AF460672_5end,CAGE_peak_1_at_AF460678_5end,CAGE_peak_1_at_AF460691_5end,CAGE_peak_1_at_AF460699_5end,CAGE_peak_1_at_AF460700_5end,CAGE_peak_1_at_AF460800_5end,CAGE_peak_1_at_DQ454508_5end,CAGE_peak_1_at_U64467_5end | |||
|id=chr14:106725347..106725368,- | |||
|ontology_enrichment_celltype=CL:0000236!5.44e-32!14;CL:0000945!4.40e-29!24;CL:0000826!4.40e-29!24;CL:0000838!1.45e-11!52;CL:0000542!2.77e-11!53;CL:0000051!2.77e-11!53 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.00e-87;13!CL:0000945;1.55e-75;24!CL:0000542;1.05e-23;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.86e-80,14;CL:0000945,1.51e-75,24;CL:0000826,1.51e-75,24;CL:0000838,9.19e-34,52;CL:0000542,4.37e-33,53;CL:0000051,4.37e-33,53;CL:0002087,6.42e-14,115;CL:0002031,3.00e-13,120;CL:0000738,1.95e-11,136;CL:0002032,2.57e-09,161;CL:0000837,2.57e-09,161;CL:0000037,7.80e-09,168;CL:0000988,2.86e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.05e-23;53!UBERON:0001045;5.30e-11;1!UBERON:0006298;1.27e-10;1!UBERON:0005425;1.27e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.30e-26!115;UBERON:0000178!3.10e-08!15;UBERON:0000179!3.10e-08!15;UBERON:0000463!3.10e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.66e-11;1!UBERON:0001154;5.30e-11;1!UBERON:0001153;5.30e-11;1!UBERON:0009854;5.30e-11;1!UBERON:0001736;1.27e-10;1!UBERON:0000941;1.27e-10;1!UBERON:0001785;1.27e-10;1!UBERON:0002464;1.27e-10;1!UBERON:0004904;1.27e-10;1!UBERON:0001021;1.27e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.53e-11,1;UBERON:0001154,5.57e-11,1;UBERON:0001153,5.57e-11,1;UBERON:0001045,5.57e-11,1;UBERON:0001736,9.05e-11,1;UBERON:0006298,9.05e-11,1;UBERON:0000941,1.46e-10,1;UBERON:0001785,1.46e-10,1;UBERON:0002464,1.46e-10,1;UBERON:0004904,1.46e-10,1;UBERON:0001021,1.46e-10,1;UBERON:0003902,1.46e-10,1;UBERON:0005425,1.46e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65459202534839,3.85872770414745,4.171671409625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,6.00752472388345,1.77901850772711,1.28019066769952,1.60158394814405,4.59801951963587,3.30522436392431,3.81621501814146,5.69212969109448,4.11066032559657,5.73409842187843,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.70894156152249,0,0.822724546172388,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,4.14425873296722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0.828478110694391,6.94632430536731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,0,0,0,0,0.845855261818682,0.515663103788617,0,0,0,0,0,1.83491713361816,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.426467963801962,0,0.322944549180031,0,0,0.0636471582781649,0,0.653150243690884,0,0.875576689189638,0.717222053926764,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | |||
|short_description=p1@AF460666,p1@AF460671,p1@AF460672,p1@AF460678,p1@AF460691,p1@AF460699,p1@AF460700,p1@AF460800,p1@DQ454508,p1@U64467 | |||
}} |
Latest revision as of 18:44, 24 July 2015
Short description: | p1@AF460666, p1@AF460671, p1@AF460672, p1@AF460678, p1@AF460691, p1@AF460699, p1@AF460700, p1@AF460800, p1@DQ454508, p1@U64467 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AF460666_5end, CAGE_peak_1_at_AF460671_5end, CAGE_peak_1_at_AF460672_5end, CAGE_peak_1_at_AF460678_5end, CAGE_peak_1_at_AF460691_5end, CAGE_peak_1_at_AF460699_5end, CAGE_peak_1_at_AF460700_5end, CAGE_peak_1_at_AF460800_5end, CAGE_peak_1_at_DQ454508_5end, CAGE_peak_1_at_U64467_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | 0bp_to_AF460666, AF460671, AF460672, AF460678, AF460691, AF460699, AF460700, AF460800, DQ454508, U64467_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.86e-80 | 14 |
lymphocyte of B lineage | 1.51e-75 | 24 |
pro-B cell | 1.51e-75 | 24 |
lymphoid lineage restricted progenitor cell | 9.19e-34 | 52 |
lymphocyte | 4.37e-33 | 53 |
common lymphoid progenitor | 4.37e-33 | 53 |
nongranular leukocyte | 6.42e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.00e-13 | 120 |
leukocyte | 1.95e-11 | 136 |
hematopoietic oligopotent progenitor cell | 2.57e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-09 | 161 |
hematopoietic stem cell | 7.80e-09 | 168 |
hematopoietic cell | 2.86e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.53e-11 | 1 |
vermiform appendix | 5.57e-11 | 1 |
caecum | 5.57e-11 | 1 |
midgut | 5.57e-11 | 1 |
submandibular gland | 9.05e-11 | 1 |
submandibular gland primordium | 9.05e-11 | 1 |
cranial nerve II | 1.46e-10 | 1 |
cranial nerve | 1.46e-10 | 1 |
nerve trunk | 1.46e-10 | 1 |
nerve connecting eye with brain | 1.46e-10 | 1 |
nerve | 1.46e-10 | 1 |
retinal neural layer | 1.46e-10 | 1 |
presumptive neural retina | 1.46e-10 | 1 |