FFCP PHASE1:Hg19::chr14:35119946..35119987,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:35119946..35119987,- to FFCP PHASE1:Hg19::chr14:35119946..35119987,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:35119946..35119987,- | |||
|description=CAGE_peak_at_chr14:35119946..35119987,- | |||
|id=chr14:35119946..35119987,- | |||
|ontology_enrichment_celltype=CL:0000055!9.58e-33!180;CL:0000680!7.31e-22!57;CL:0000056!7.31e-22!57;CL:0000355!7.31e-22!57;CL:0000187!3.33e-20!54;CL:0000183!5.49e-20!59;CL:0000222!2.66e-19!119;CL:0000057!8.69e-19!75;CL:0000393!1.10e-16!60;CL:0000211!1.10e-16!60;CL:0000359!4.80e-16!32;CL:0000192!2.07e-15!42;CL:0000514!2.07e-15!42;CL:0000144!1.92e-14!625;CL:0000548!1.50e-13!679;CL:0000004!1.50e-13!679;CL:0000255!1.50e-13!679;CL:0000048!1.91e-13!430;CL:0000012!3.31e-13!682;CL:0000723!1.14e-12!436;CL:0002620!7.80e-12!23;CL:0000034!1.11e-11!444;CL:0002371!1.86e-11!591;CL:0000003!5.94e-09!722;CL:0002334!9.83e-08!12;CL:0002539!1.34e-07!10;CL:0000188!1.55e-07!9;CL:0000220!2.56e-07!246;CL:0002321!4.35e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.87e-16;32!CL:0000188;2.78e-12;9!CL:0000187;5.73e-12;55!CL:0000393;9.61e-11;61!CL:0000211;9.61e-11;61!CL:0002570;1.62e-10;8!CL:0000192;3.03e-10;43!CL:0002539;7.03e-09;10!CL:0000723;1.26e-08;61!CL:0000134;2.64e-08;55!CL:0000048;1.26e-07;58!CL:0000034;2.54e-07;69!CL:0002582;3.77e-07;3!CL:0000077;5.08e-07;19!CL:0000594;6.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.02e-23,58;CL:0000056,6.02e-23,58;CL:0000355,6.02e-23,58;CL:0000187,1.48e-21,55;CL:0000393,1.44e-18,61;CL:0000211,1.44e-18,61;CL:0000359,4.99e-17,32;CL:0000192,3.38e-14,43;CL:0000514,3.38e-14,43;CL:0000222,3.88e-14,121;CL:0000188,6.25e-13,9;CL:0002570,1.03e-10,8;CL:0000048,2.74e-10,427;CL:0000723,7.29e-10,433;CL:0000034,2.56e-09,441;CL:0002539,7.27e-09,10;CL:0002582,4.13e-07,3;CL:0000077,5.37e-07,19;CL:0000594,5.79e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000355;4.16e-13;58!CL:0000514;3.03e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!1.84e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.02e-21;14!DOID:120;1.54e-09;27!DOID:193;1.19e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.93e-22,14;DOID:120,1.19e-09,27;DOID:193,9.40e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.59e-24!83;UBERON:0002329!7.59e-24!83;UBERON:0003077!7.59e-24!83;UBERON:0003059!7.59e-24!83;UBERON:0007282!7.59e-24!83;UBERON:0009618!7.59e-24!83;UBERON:0007285!7.59e-24!83;UBERON:0004290!4.41e-22!70;UBERON:0001134!1.95e-20!61;UBERON:0002036!1.95e-20!61;UBERON:0003082!1.95e-20!61;UBERON:0002385!2.88e-19!63;UBERON:0001015!2.88e-19!63;UBERON:0000383!2.88e-19!63;UBERON:0000486!6.96e-19!82;UBERON:0005256!3.14e-15!143;UBERON:0000490!5.91e-14!138;UBERON:0002100!6.53e-11!216;UBERON:0002049!1.02e-10!79;UBERON:0007798!1.02e-10!79;UBERON:0000055!3.89e-10!69;UBERON:0001637!4.88e-10!42;UBERON:0003509!4.88e-10!42;UBERON:0004572!4.88e-10!42;UBERON:0004872!1.42e-09!84;UBERON:0001981!1.66e-08!60;UBERON:0007500!1.66e-08!60;UBERON:0004537!1.66e-08!60;UBERON:0006965!1.66e-08!60;UBERON:0004535!1.93e-08!110;UBERON:0001135!6.22e-08!15;UBERON:0001009!7.53e-08!113;UBERON:0004237!1.34e-07!10;UBERON:0004695!1.34e-07!10;UBERON:0002111!1.34e-07!10;UBERON:0004178!1.34e-07!10;UBERON:0004573!1.58e-07!33;UBERON:0004571!1.58e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;9.08e-17;31!UBERON:0001015;9.08e-17;31!UBERON:0000383;9.08e-17;31!UBERON:0000992;6.06e-11;13!UBERON:0002118;1.43e-10;5!UBERON:0001134;1.50e-09;16!UBERON:0002036;1.50e-09;16!UBERON:0001135;5.59e-09;15!UBERON:0004237;7.03e-09;10!UBERON:0004695;7.03e-09;10!UBERON:0002111;7.03e-09;10!UBERON:0004178;7.03e-09;10!UBERON:0002119;7.15e-08;4!UBERON:0000991;1.24e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.92e-21,71;UBERON:0003059,2.92e-21,71;UBERON:0007282,2.92e-21,71;UBERON:0004290,2.92e-21,71;UBERON:0009618,2.92e-21,71;UBERON:0001134,7.38e-21,62;UBERON:0002036,7.38e-21,62;UBERON:0003082,7.38e-21,62;UBERON:0003077,7.99e-21,72;UBERON:0007285,7.99e-21,72;UBERON:0007524,2.12e-20,73;UBERON:0002385,6.48e-20,64;UBERON:0001015,6.48e-20,64;UBERON:0000383,6.48e-20,64;UBERON:0007503,1.90e-18,78;UBERON:0000486,4.98e-18,83;UBERON:0005256,1.69e-12,122;UBERON:0000490,1.50e-11,148;UBERON:0000992,4.36e-11,13;UBERON:0002118,1.46e-10,5;UBERON:0001135,5.88e-09,15;UBERON:0004237,7.27e-09,10;UBERON:0004695,7.27e-09,10;UBERON:0002111,7.27e-09,10;UBERON:0004178,7.27e-09,10;UBERON:0003104,2.30e-08,160;UBERON:0009142,2.30e-08,160;UBERON:0002119,4.31e-08,4;UBERON:0001637,5.56e-08,42;UBERON:0003509,5.56e-08,42;UBERON:0004572,5.56e-08,42;UBERON:0000991,9.96e-08,21;UBERON:0009196,9.96e-08,21;UBERON:0009117,9.96e-08,21;UBERON:0005564,9.96e-08,21;UBERON:0004176,2.85e-07,22 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0,0.990130823680373,0.331397375727916,4.70627602516243,3.01347264011988,5.11217063271161,3.41552959153355,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0.775250277507987,0.71153252537342,0.66944122552934,0,0,0,0,0.81014194788176,0.803697554556718,0.898117490504679,0.563057402416611,0,0,0,0,0,0,0.993943903390637,0,0.926864265692532,0,0,0,0,0.24666754841716,0.933633106199299,1.21239604862719,0.326923806226917,0.151357427644931,0,0,3.43376084513353,0.570471821544449,1.49448680551801,1.17434498643765,0.161872944368132,0.702254033511242,0,0.491337269247072,0.103325781175765,0,0,1.82032272387605,3.59309070908119,0.336672227908132,0.125118519871964,1.10825646193673,0,0.919463387397059,0.300476117813194,1.02088964844019,0.89694817844431,0.640672166455702,1.27159140695737,0.900273288253207,0.515262646192195,0.772921620136887,1.11670113798954,1.5189869901714,1.75386609290158,1.00973509697646,0.828449087780694,0,0.710019185033229,0.906768884048762,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,1.40890433082986,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.784917590417525,0.43596006883328,1.68678057388185,0.775630294546667,0,1.690605505112,2.39344304926383,2.08014873822732,0.257207374262142,1.41849132023278,0,0.714889968290738,0,0,3.58309802723109,0.710783897485092,0,1.50719688529793,0,5.19859554146697,0,0,0,0.479249710983165,0,0,1.01346914667305,1.02738161275192,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,1.08506009479894,0.207970861530807,0.356857977594324,0.315404830067869,0.234282829985426,0.902838299183157,0,1.03473071292505,0.664225598535437,1.10621501125022,1.04260337361699,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.992431231275107,0.153461973288062,0.561320188866147,0.896974044789907,0.511707249066704,0.160853921143607,0,4.47208112027701,2.30830242907065,3.12083192852475,5.19254429183621,3.37010097533882,0,0,0.184161977871793,0.34444334449382,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,12.8547143875328,1.83674364755032,4.62145851343933,1.84204409671355,1.92971201478343,12.0310674252466,2.46528379654188,2.47157219506693,1.51354460599453,0,0,0.255225424989168,0,0.464845549297286,1.25924938732256,0.6970372701606,0,2.12922412126809,1.73986598415015,0.74129687641568,0.429374660225974,1.48863347743867,0.949138274156178,1.71567174531442,0,0,1.27281299170375,1.56989728039846,0.719489830333259,3.29444435683266,1.41374882814824,1.41527737101321,0,0,0,1.21856744815642,2.11300293513511,0.682499557039929,0,0,0,0.66343897524122,1.31535265576129,0,0,1.62328301570163,0.92947049429925,1.12678241012897,1.29070216983646,1.57198465620994,1.426684205925,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81926752335391,0,0,0,0,0,7.01244841644307,0,0,0,0,0,0,0,1.24415835064723,0.0898683511473268,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0.325942115766024,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,6.16688660910379,2.78200456384186,0,0,0.721429382263803,0,0,0,0,0,0,0.248505071130865,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53440807646576,0,0,0,0,0,3.25799761052228,0.864221491201268,2.93928624098468,0,0,2.21504428321048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,1.79105763464249,1.8697064787778,4.43844689202091,0.189403005275089,0.754703705257725,1.77962244319307,0.686520205190771,1.36107831386915,1.24349760466224,0.443565449968902,2.86734180894664,2.24901556081802,2.79473322377267,1.65882483136342,7.97525143673985,4.17396049449387,1.6528336989694,3.04644169735036,3.25496586563729,5.27361111687422,3.43713782535963,3.24823631914946,2.3885753321917,0.400027764663154,2.06037423109676,1.01024846629776,0,0,2.78774068787403,0,0.680117776536817,0.231522474323834,2.20263034055821,1.25362188757041,0,4.38568099157414,4.24053950270115,7.13781941602385,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0.327609848846413,1.47463745252232,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.63600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| ||
|short_description=p@chr14:35119946..35119987,- | |||
}} | }} |
Latest revision as of 20:15, 24 July 2015
Short description: | p@chr14:35119946..35119987, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:35119946..35119987, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.02e-23 | 58 |
myoblast | 6.02e-23 | 58 |
multi-potent skeletal muscle stem cell | 6.02e-23 | 58 |
muscle cell | 1.48e-21 | 55 |
electrically responsive cell | 1.44e-18 | 61 |
electrically active cell | 1.44e-18 | 61 |
vascular associated smooth muscle cell | 4.99e-17 | 32 |
smooth muscle cell | 3.38e-14 | 43 |
smooth muscle myoblast | 3.38e-14 | 43 |
mesodermal cell | 3.88e-14 | 121 |
cell of skeletal muscle | 6.25e-13 | 9 |
mesenchymal stem cell of adipose | 1.03e-10 | 8 |
multi fate stem cell | 2.74e-10 | 427 |
somatic stem cell | 7.29e-10 | 433 |
stem cell | 2.56e-09 | 441 |
aortic smooth muscle cell | 7.27e-09 | 10 |
visceral preadipocyte | 4.13e-07 | 3 |
mesothelial cell | 5.37e-07 | 19 |
skeletal muscle satellite cell | 5.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.93e-22 | 14 |
female reproductive organ cancer | 1.19e-09 | 27 |
reproductive organ cancer | 9.40e-09 | 29 |