FFCP PHASE1:Hg19::chr14:73132340..73132386,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:73132340..73132386,+ | |||
|description=CAGE_peak_at_chr14:73132340..73132386,+ | |description=CAGE_peak_at_chr14:73132340..73132386,+ | ||
|id=chr14:73132340..73132386,+ | |id=chr14:73132340..73132386,+ | ||
|ontology_enrichment_celltype=CL:0000222!3.70e-30!119;CL:0000055!9.55e-30!180;CL:0000220!1.54e-23!246;CL:0002321!5.38e-23!248;CL:0000192!2.41e-19!42;CL:0000514!2.41e-19!42;CL:0000680!2.78e-19!57;CL:0000056!2.78e-19!57;CL:0000355!2.78e-19!57;CL:0000144!4.81e-19!625;CL:0000187!2.67e-18!54;CL:0000183!3.87e-18!59;CL:0000359!4.14e-18!32;CL:0002371!1.01e-17!591;CL:0000393!1.27e-17!60;CL:0000211!1.27e-17!60;CL:0000548!1.32e-16!679;CL:0000004!1.32e-16!679;CL:0000255!1.32e-16!679;CL:0000012!3.57e-16!682;CL:0000057!1.36e-14!75;CL:0002139!1.03e-12!24;CL:0000071!5.30e-12!18;CL:0002546!5.30e-12!18;CL:0000003!1.49e-11!722;CL:0002620!3.75e-11!23;CL:0002078!4.74e-11!44;CL:0000213!6.11e-11!57;CL:0000215!6.11e-11!57;CL:0000115!1.65e-10!35;CL:0002539!2.66e-09!10;CL:1000413!1.70e-08!9;CL:0000076!6.78e-07!62 | |ontology_enrichment_celltype=CL:0000222!3.70e-30!119;CL:0000055!9.55e-30!180;CL:0000220!1.54e-23!246;CL:0002321!5.38e-23!248;CL:0000192!2.41e-19!42;CL:0000514!2.41e-19!42;CL:0000680!2.78e-19!57;CL:0000056!2.78e-19!57;CL:0000355!2.78e-19!57;CL:0000144!4.81e-19!625;CL:0000187!2.67e-18!54;CL:0000183!3.87e-18!59;CL:0000359!4.14e-18!32;CL:0002371!1.01e-17!591;CL:0000393!1.27e-17!60;CL:0000211!1.27e-17!60;CL:0000548!1.32e-16!679;CL:0000004!1.32e-16!679;CL:0000255!1.32e-16!679;CL:0000012!3.57e-16!682;CL:0000057!1.36e-14!75;CL:0002139!1.03e-12!24;CL:0000071!5.30e-12!18;CL:0002546!5.30e-12!18;CL:0000003!1.49e-11!722;CL:0002620!3.75e-11!23;CL:0002078!4.74e-11!44;CL:0000213!6.11e-11!57;CL:0000215!6.11e-11!57;CL:0000115!1.65e-10!35;CL:0002539!2.66e-09!10;CL:1000413!1.70e-08!9;CL:0000076!6.78e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.49e-17;32!CL:0002539;6.88e-13;10!CL:0000192;1.17e-12;43!CL:0000071;1.74e-12;18!CL:1000413;6.97e-10;9!CL:0002139;1.68e-09;24!CL:0000187;8.16e-08;55!CL:0000115;1.33e-07;36!CL:0002551;3.04e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.20e-22,121;CL:0000359,1.51e-18,32;CL:0000192,9.16e-17,43;CL:0000514,9.16e-17,43;CL:0002321,1.96e-14,250;CL:0000187,3.06e-14,55;CL:0000680,5.85e-14,58;CL:0000056,5.85e-14,58;CL:0000355,5.85e-14,58;CL:0002539,5.13e-13,10;CL:0000393,7.50e-13,61;CL:0000211,7.50e-13,61;CL:0000071,1.27e-12,18;CL:0002546,1.27e-12,18;CL:0000057,3.92e-10,76;CL:1000413,6.40e-10,9;CL:0002139,1.26e-09,24;CL:0002078,5.46e-09,45;CL:0000115,1.50e-08,36;CL:0000213,1.01e-07,58;CL:0000215,1.01e-07,58;CL:0002551,3.17e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;1.17e-12;43!CL:0002546;1.74e-12;18 | |||
|ontology_enrichment_disease=DOID:2394!8.03e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.54e-30!79;UBERON:0007798!2.54e-30!79;UBERON:0001981!5.15e-28!60;UBERON:0007500!5.15e-28!60;UBERON:0004537!5.15e-28!60;UBERON:0006965!5.15e-28!60;UBERON:0000055!8.32e-27!69;UBERON:0001637!5.13e-26!42;UBERON:0003509!5.13e-26!42;UBERON:0004572!5.13e-26!42;UBERON:0000914!1.30e-24!83;UBERON:0002329!1.30e-24!83;UBERON:0003077!1.30e-24!83;UBERON:0003059!1.30e-24!83;UBERON:0007282!1.30e-24!83;UBERON:0009618!1.30e-24!83;UBERON:0007285!1.30e-24!83;UBERON:0004872!1.21e-21!84;UBERON:0004535!3.05e-21!110;UBERON:0001009!5.66e-20!113;UBERON:0004573!5.84e-20!33;UBERON:0004571!5.84e-20!33;UBERON:0004290!8.06e-20!70;UBERON:0000490!8.00e-19!138;UBERON:0000486!6.81e-18!82;UBERON:0003914!5.93e-17!118;UBERON:0001134!7.05e-17!61;UBERON:0002036!7.05e-17!61;UBERON:0003082!7.05e-17!61;UBERON:0005256!4.22e-16!143;UBERON:0002385!8.34e-16!63;UBERON:0001015!8.34e-16!63;UBERON:0000383!8.34e-16!63;UBERON:0000947!1.70e-13!21;UBERON:0010191!1.70e-13!21;UBERON:0000487!2.88e-12!22;UBERON:0000119!4.67e-12!312;UBERON:0001986!5.30e-12!18;UBERON:0004638!5.30e-12!18;UBERON:0004852!5.30e-12!18;UBERON:0000483!4.52e-11!309;UBERON:0006914!5.20e-11!25;UBERON:0002100!1.38e-09!216;UBERON:0004237!2.66e-09!10;UBERON:0004695!2.66e-09!10;UBERON:0002111!2.66e-09!10;UBERON:0004178!2.66e-09!10;UBERON:0000475!4.98e-09!365;UBERON:0003102!1.36e-08!95;UBERON:0003915!1.70e-08!9;UBERON:0004700!1.70e-08!9;UBERON:0001917!1.70e-08!9;UBERON:0002097!4.38e-08!40;UBERON:0002199!5.91e-08!45;UBERON:0002416!5.91e-08!45;UBERON:0000467!2.91e-07!625;UBERON:0000480!3.66e-07!626;UBERON:0003104!3.69e-07!238;UBERON:0009142!3.69e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.31e-24;42!UBERON:0003509;1.31e-24;42!UBERON:0004572;1.31e-24;42!UBERON:0004573;6.24e-24;33!UBERON:0004571;6.24e-24;33!UBERON:0007500;3.89e-18;56!UBERON:0001981;3.89e-18;56!UBERON:0004537;3.89e-18;56!UBERON:0000947;6.67e-18;21!UBERON:0010191;6.67e-18;21!UBERON:0004237;6.88e-13;10!UBERON:0004695;6.88e-13;10!UBERON:0002111;6.88e-13;10!UBERON:0004178;6.88e-13;10!UBERON:0004638;1.74e-12;18!UBERON:0001986;1.74e-12;18!UBERON:0004852;1.74e-12;18!UBERON:0003914;1.78e-12;74!UBERON:0002049;3.02e-12;75!UBERON:0007798;3.02e-12;75!UBERON:0000487;3.49e-12;22!UBERON:0000055;5.64e-12;65!UBERON:0006914;1.98e-11;25!UBERON:0003915;6.97e-10;9!UBERON:0004700;6.97e-10;9!UBERON:0001917;6.97e-10;9!UBERON:0000490;1.77e-08;33!UBERON:0001135;1.12e-07;15 | |||
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| ||
|short_description=p@chr14:73132340..73132386,+ | |short_description=p@chr14:73132340..73132386,+ | ||
}} | }} |
Latest revision as of 22:30, 24 July 2015
Short description: | p@chr14:73132340..73132386, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:73132340..73132386, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.20e-22 | 121 |
vascular associated smooth muscle cell | 1.51e-18 | 32 |
smooth muscle cell | 9.16e-17 | 43 |
smooth muscle myoblast | 9.16e-17 | 43 |
embryonic cell | 1.96e-14 | 250 |
muscle cell | 3.06e-14 | 55 |
muscle precursor cell | 5.85e-14 | 58 |
myoblast | 5.85e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.85e-14 | 58 |
aortic smooth muscle cell | 5.13e-13 | 10 |
electrically responsive cell | 7.50e-13 | 61 |
electrically active cell | 7.50e-13 | 61 |
blood vessel endothelial cell | 1.27e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.27e-12 | 18 |
fibroblast | 3.92e-10 | 76 |
endothelial cell of artery | 6.40e-10 | 9 |
endothelial cell of vascular tree | 1.26e-09 | 24 |
meso-epithelial cell | 5.46e-09 | 45 |
endothelial cell | 1.50e-08 | 36 |
lining cell | 1.01e-07 | 58 |
barrier cell | 1.01e-07 | 58 |
fibroblast of dermis | 3.17e-07 | 6 |