FFCP PHASE1:Hg19::chr15:90334271..90334330,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:90334271..90334330,- | |||
|coexpression_cluster_id=C403 | |||
|description=CAGE_peak_at_chr15:90334271..90334330,- | |description=CAGE_peak_at_chr15:90334271..90334330,- | ||
|id=chr15:90334271..90334330,- | |id=chr15:90334271..90334330,- | ||
|ontology_enrichment_celltype=CL:0000048!7.95e-31!430;CL:0000723!3.59e-29!436;CL:0000034!1.80e-28!444;CL:0002371!2.15e-22!591;CL:0000055!9.33e-20!180;CL:0002320!5.49e-19!365;CL:0000134!1.63e-17!358;CL:0000144!4.13e-17!625;CL:0000057!6.22e-16!75;CL:0002057!9.78e-15!42;CL:0000680!1.16e-14!57;CL:0000056!1.16e-14!57;CL:0000355!1.16e-14!57;CL:0000183!1.39e-13!59;CL:0000219!2.05e-13!390;CL:0000187!5.31e-13!54;CL:0000860!1.03e-12!45;CL:0000766!9.34e-12!76;CL:0002194!2.01e-11!63;CL:0000576!2.01e-11!63;CL:0000040!2.01e-11!63;CL:0000559!2.01e-11!63;CL:0002009!4.79e-11!65;CL:0000192!3.63e-10!42;CL:0000514!3.63e-10!42;CL:0000393!4.61e-10!60;CL:0000211!4.61e-10!60;CL:0000012!8.39e-10!682;CL:0000557!1.24e-09!71;CL:0000548!1.35e-09!679;CL:0000004!1.35e-09!679;CL:0000255!1.35e-09!679;CL:0000839!1.47e-09!70;CL:0002620!1.55e-09!23;CL:0000222!4.17e-09!119;CL:0000359!3.37e-08!32 | |ontology_enrichment_celltype=CL:0000048!7.95e-31!430;CL:0000723!3.59e-29!436;CL:0000034!1.80e-28!444;CL:0002371!2.15e-22!591;CL:0000055!9.33e-20!180;CL:0002320!5.49e-19!365;CL:0000134!1.63e-17!358;CL:0000144!4.13e-17!625;CL:0000057!6.22e-16!75;CL:0002057!9.78e-15!42;CL:0000680!1.16e-14!57;CL:0000056!1.16e-14!57;CL:0000355!1.16e-14!57;CL:0000183!1.39e-13!59;CL:0000219!2.05e-13!390;CL:0000187!5.31e-13!54;CL:0000860!1.03e-12!45;CL:0000766!9.34e-12!76;CL:0002194!2.01e-11!63;CL:0000576!2.01e-11!63;CL:0000040!2.01e-11!63;CL:0000559!2.01e-11!63;CL:0002009!4.79e-11!65;CL:0000192!3.63e-10!42;CL:0000514!3.63e-10!42;CL:0000393!4.61e-10!60;CL:0000211!4.61e-10!60;CL:0000012!8.39e-10!682;CL:0000557!1.24e-09!71;CL:0000548!1.35e-09!679;CL:0000004!1.35e-09!679;CL:0000255!1.35e-09!679;CL:0000839!1.47e-09!70;CL:0002620!1.55e-09!23;CL:0000222!4.17e-09!119;CL:0000359!3.37e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.21e-21;33!CL:0002057;8.21e-21;33!CL:0000473;3.50e-14;39!CL:0000234;3.50e-14;39!CL:0000576;1.97e-09;48!CL:0002620;2.29e-07;23!CL:0002539;6.21e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.02e-18,427;CL:0000723,1.18e-17,433;CL:0000860,3.74e-17,42;CL:0002057,3.74e-17,42;CL:0000034,1.14e-16,441;CL:0000473,2.61e-15,48;CL:0000234,2.61e-15,48;CL:0002194,2.25e-12,59;CL:0000576,2.25e-12,59;CL:0000040,2.25e-12,59;CL:0000559,2.25e-12,59;CL:0000766,4.82e-12,72;CL:0002320,1.07e-11,361;CL:0002009,1.15e-11,61;CL:0000134,3.81e-11,354;CL:0000839,4.24e-10,66;CL:0000557,8.12e-10,67;CL:0000680,7.55e-09,58;CL:0000056,7.55e-09,58;CL:0000355,7.55e-09,58;CL:0000219,2.88e-08,386;CL:0000057,1.34e-07,76;CL:0002620,2.52e-07,23;CL:0002539,3.94e-07,10;CL:0000187,4.75e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;3.14e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.07e-24!167;UBERON:0002384!2.72e-18!375;UBERON:0000926!1.76e-16!448;UBERON:0004120!1.76e-16!448;UBERON:0006603!1.76e-16!448;UBERON:0000914!1.19e-15!83;UBERON:0002329!1.19e-15!83;UBERON:0003077!1.19e-15!83;UBERON:0003059!1.19e-15!83;UBERON:0007282!1.19e-15!83;UBERON:0009618!1.19e-15!83;UBERON:0007285!1.19e-15!83;UBERON:0004290!1.93e-15!70;UBERON:0003081!2.08e-14!216;UBERON:0002385!3.54e-13!63;UBERON:0001015!3.54e-13!63;UBERON:0000383!3.54e-13!63;UBERON:0005256!7.07e-13!143;UBERON:0001134!1.71e-12!61;UBERON:0002036!1.71e-12!61;UBERON:0003082!1.71e-12!61;UBERON:0000486!7.90e-12!82;UBERON:0002405!1.41e-11!115;UBERON:0002371!1.82e-11!80;UBERON:0004765!2.21e-10!101;UBERON:0001434!2.21e-10!101;UBERON:0001474!6.07e-10!86;UBERON:0002193!9.35e-09!112;UBERON:0002390!1.01e-08!102;UBERON:0003061!1.01e-08!102;UBERON:0003914!1.07e-08!118;UBERON:0004535!1.82e-08!110;UBERON:0002049!2.44e-08!79;UBERON:0007798!2.44e-08!79;UBERON:0000479!2.63e-08!787;UBERON:0001981!3.19e-08!60;UBERON:0007500!3.19e-08!60;UBERON:0004537!3.19e-08!60;UBERON:0006965!3.19e-08!60;UBERON:0000490!3.76e-08!138;UBERON:0000055!5.08e-08!69;UBERON:0004573!5.50e-08!33;UBERON:0004571!5.50e-08!33;UBERON:0002100!8.20e-08!216;UBERON:0001637!1.00e-07!42;UBERON:0003509!1.00e-07!42;UBERON:0004572!1.00e-07!42;UBERON:0001009!1.02e-07!113;UBERON:0001135!2.08e-07!15;UBERON:0000468!3.83e-07!659;UBERON:0004872!5.23e-07!84;UBERON:0000467!5.28e-07!625;UBERON:0002199!5.93e-07!45;UBERON:0002416!5.93e-07!45;UBERON:0000480!6.97e-07!626 | |ontology_enrichment_uberon=UBERON:0002204!1.07e-24!167;UBERON:0002384!2.72e-18!375;UBERON:0000926!1.76e-16!448;UBERON:0004120!1.76e-16!448;UBERON:0006603!1.76e-16!448;UBERON:0000914!1.19e-15!83;UBERON:0002329!1.19e-15!83;UBERON:0003077!1.19e-15!83;UBERON:0003059!1.19e-15!83;UBERON:0007282!1.19e-15!83;UBERON:0009618!1.19e-15!83;UBERON:0007285!1.19e-15!83;UBERON:0004290!1.93e-15!70;UBERON:0003081!2.08e-14!216;UBERON:0002385!3.54e-13!63;UBERON:0001015!3.54e-13!63;UBERON:0000383!3.54e-13!63;UBERON:0005256!7.07e-13!143;UBERON:0001134!1.71e-12!61;UBERON:0002036!1.71e-12!61;UBERON:0003082!1.71e-12!61;UBERON:0000486!7.90e-12!82;UBERON:0002405!1.41e-11!115;UBERON:0002371!1.82e-11!80;UBERON:0004765!2.21e-10!101;UBERON:0001434!2.21e-10!101;UBERON:0001474!6.07e-10!86;UBERON:0002193!9.35e-09!112;UBERON:0002390!1.01e-08!102;UBERON:0003061!1.01e-08!102;UBERON:0003914!1.07e-08!118;UBERON:0004535!1.82e-08!110;UBERON:0002049!2.44e-08!79;UBERON:0007798!2.44e-08!79;UBERON:0000479!2.63e-08!787;UBERON:0001981!3.19e-08!60;UBERON:0007500!3.19e-08!60;UBERON:0004537!3.19e-08!60;UBERON:0006965!3.19e-08!60;UBERON:0000490!3.76e-08!138;UBERON:0000055!5.08e-08!69;UBERON:0004573!5.50e-08!33;UBERON:0004571!5.50e-08!33;UBERON:0002100!8.20e-08!216;UBERON:0001637!1.00e-07!42;UBERON:0003509!1.00e-07!42;UBERON:0004572!1.00e-07!42;UBERON:0001009!1.02e-07!113;UBERON:0001135!2.08e-07!15;UBERON:0000468!3.83e-07!659;UBERON:0004872!5.23e-07!84;UBERON:0000467!5.28e-07!625;UBERON:0002199!5.93e-07!45;UBERON:0002416!5.93e-07!45;UBERON:0000480!6.97e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;6.21e-07;10!UBERON:0004695;6.21e-07;10!UBERON:0002111;6.21e-07;10!UBERON:0004178;6.21e-07;10 | |||
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| ||
|short_description=p@chr15:90334271..90334330,- | |short_description=p@chr15:90334271..90334330,- | ||
}} | }} |
Latest revision as of 05:21, 25 July 2015
Short description: | p@chr15:90334271..90334330, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90334271..90334330, - |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.02e-18 | 427 |
somatic stem cell | 1.18e-17 | 433 |
classical monocyte | 3.74e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.74e-17 | 42 |
stem cell | 1.14e-16 | 441 |
defensive cell | 2.61e-15 | 48 |
phagocyte | 2.61e-15 | 48 |
monopoietic cell | 2.25e-12 | 59 |
monocyte | 2.25e-12 | 59 |
monoblast | 2.25e-12 | 59 |
promonocyte | 2.25e-12 | 59 |
myeloid leukocyte | 4.82e-12 | 72 |
connective tissue cell | 1.07e-11 | 361 |
macrophage dendritic cell progenitor | 1.15e-11 | 61 |
mesenchymal cell | 3.81e-11 | 354 |
myeloid lineage restricted progenitor cell | 4.24e-10 | 66 |
granulocyte monocyte progenitor cell | 8.12e-10 | 67 |
muscle precursor cell | 7.55e-09 | 58 |
myoblast | 7.55e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.55e-09 | 58 |
motile cell | 2.88e-08 | 386 |
fibroblast | 1.34e-07 | 76 |
skin fibroblast | 2.52e-07 | 23 |
aortic smooth muscle cell | 3.94e-07 | 10 |
muscle cell | 4.75e-07 | 55 |