FFCP PHASE1:Hg19::chr16:56458896..56458907,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:56458896..56458907,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr16:56458896..56458907,- | |description=CAGE_peak_at_chr16:56458896..56458907,- | ||
| Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002593;8.10e-26;2!CL:0002595;3.42e-11;5 | |ontology_enrichment_celltype_v019=CL:0002593;8.10e-26;2!CL:0002595;3.42e-11;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002593,9.18e-26,2;CL:0002595,3.60e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.04e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!4.04e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;8.10e-26;2!UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0003834;3.42e-11;5!UBERON:0001533;3.42e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0003513;2.26e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0002456;8.10e-26;2!UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0003834;3.42e-11;5!UBERON:0001533;3.42e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0003513;2.26e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0002456,9.18e-26,2;UBERON:0003135,4.28e-19,11;UBERON:0003834,3.60e-11,5;UBERON:0001533,3.60e-11,5;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0003513,2.35e-08,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.232401601740905,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0.468528891450678,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,3.41004141982077,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.232401601740905,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0.468528891450678,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,3.41004141982077,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr16:56458896..56458907,- | |short_description=p@chr16:56458896..56458907,- | ||
}} | }} | ||
Latest revision as of 10:12, 25 July 2015
| Short description: | p@chr16:56458896..56458907, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr16:56458896..56458907, - |
| Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| smooth muscle cell of the internal thoracic artery | 9.18e-26 | 2 |
| smooth muscle cell of the subclavian artery | 3.60e-11 | 5 |
| Ontology term | p-value | n |
|---|---|---|
| testis | 8.65e-26 | 8 |
| internal thoracic artery | 9.18e-26 | 2 |
| male reproductive organ | 4.28e-19 | 11 |
| thoracic segment blood vessel | 3.60e-11 | 5 |
| subclavian artery | 3.60e-11 | 5 |
| gonad | 1.53e-10 | 21 |
| indifferent external genitalia | 1.53e-10 | 21 |
| indifferent gonad | 1.53e-10 | 21 |
| gonad primordium | 1.53e-10 | 21 |
| external genitalia | 4.14e-10 | 22 |
| male organism | 4.14e-10 | 22 |
| male reproductive system | 4.14e-10 | 22 |
| trunk blood vessel | 2.35e-08 | 7 |