FFCP PHASE1:Hg19::chr16:79123945..79123950,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:79123945..79123950,+ | |||
|description=CAGE_peak_at_chr16:79123945..79123950,+ | |||
|id=chr16:79123945..79123950,+ | |||
|ontology_enrichment_celltype=CL:0000763!5.09e-19!112;CL:0000049!5.09e-19!112;CL:0000037!9.89e-19!172;CL:0000566!9.89e-19!172;CL:0000988!1.10e-16!182;CL:0002057!1.78e-16!42;CL:0002032!5.88e-16!165;CL:0000837!5.88e-16!165;CL:0000860!7.46e-15!45;CL:0000766!5.85e-14!76;CL:0000839!8.14e-14!70;CL:0000557!1.73e-13!71;CL:0000738!7.33e-12!140;CL:0002194!2.72e-11!63;CL:0000576!2.72e-11!63;CL:0000040!2.72e-11!63;CL:0000559!2.72e-11!63;CL:0002393!9.34e-11!9;CL:0002397!9.34e-11!9;CL:0002009!1.06e-10!65;CL:0002031!2.46e-10!124;CL:0002087!4.92e-10!119 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.23e-21;5!CL:0000163;4.12e-12;9!CL:0002393;1.30e-10;6!CL:0002397;1.30e-10;6!CL:0000875;1.17e-09;3!CL:0002396;1.17e-09;3!CL:0000766;2.83e-08;69!CL:0000576;9.72e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.62e-22,5;CL:0002028,7.62e-22,5;CL:0002393,1.95e-18,9;CL:0002397,1.95e-18,9;CL:0000839,1.44e-16,66;CL:0000557,2.77e-16,67;CL:0000766,5.52e-15,72;CL:0000763,2.89e-12,108;CL:0000049,2.89e-12,108;CL:0000163,3.17e-12,9;CL:0000875,6.87e-10,3;CL:0002396,6.87e-10,3;CL:0002031,2.55e-09,120;CL:0002194,3.07e-09,59;CL:0000576,3.07e-09,59;CL:0000040,3.07e-09,59;CL:0000559,3.07e-09,59;CL:0000738,3.31e-09,136;CL:0000037,4.47e-09,168;CL:0000860,6.05e-09,42;CL:0002057,6.05e-09,42;CL:0002009,6.90e-09,61;CL:0000988,1.93e-08,177;CL:0002032,2.32e-08,161;CL:0000837,2.32e-08,161;CL:0000473,1.09e-07,48;CL:0000234,1.09e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.49e-10!39;DOID:8692!3.90e-10!31;DOID:2531!1.21e-08!51;DOID:0060083!1.21e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:225;1.77e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:225,1.91e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-27!102;UBERON:0003061!1.89e-27!102;UBERON:0002193!6.62e-26!112;UBERON:0007023!1.24e-17!115;UBERON:0000178!3.25e-14!15;UBERON:0000179!3.25e-14!15;UBERON:0000463!3.25e-14!15;UBERON:0002371!6.60e-13!80;UBERON:0002405!2.20e-12!115;UBERON:0001474!2.51e-11!86;UBERON:0004765!9.96e-10!101;UBERON:0001434!9.96e-10!101;UBERON:0003081!1.65e-07!216;UBERON:0004177!2.11e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.04e-35;15!UBERON:0000179;1.04e-35;15!UBERON:0000463;1.04e-35;15!UBERON:0002390;2.03e-18;32!UBERON:0002193;1.29e-10;42!UBERON:0007195;3.22e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.88e-36,15;UBERON:0000179,8.88e-36,15;UBERON:0000463,8.88e-36,15;UBERON:0002390,1.41e-34,98;UBERON:0003061,1.41e-34,98;UBERON:0002193,5.38e-31,108;UBERON:0002371,2.40e-16,76;UBERON:0001474,5.94e-15,82;UBERON:0003081,1.88e-14,203;UBERON:0004765,2.21e-13,90;UBERON:0002405,7.33e-13,93;UBERON:0001434,9.08e-12,100;UBERON:0007195,3.83e-08,1;UBERON:0000926,1.09e-07,315;UBERON:0004120,1.09e-07,315;UBERON:0006603,1.09e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0.619412741790207,0,0.768482119587302,0.47296445977717,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,1.70489900213078,0,0,0,0.502497330513487,1.5644487552606,0.868755378820466,0,0,0,1.26753171787165,1.70083439972035,3.35453832813401,0.561643155732475,1.05123824989054,0.803627933485401,1.71007646244749,1.79025009479181,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.790152254325231,0,0,0.411202997999018,0,0,0,0,0.222820913770347,0,0.221533894583621,0.541607727530031,0.128091319725675,0,0,0,0.289803085735052,0,0.535081656179426,0,0,0.766440987203842,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,2.64145302039678,2.28060927094849,1.58531948758658,1.8936365013957,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.788123040807709,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,2.02979043692868,4.58782324285425,2.27858874869665,2.85878130549347,1.64544909234478,4.53931317834902,2.70015718619057,3.17250070517708,0,0,0,0,0,1.63626239701352,0.318852545457645,0.199579371432817,0,0.635020748171649,0,0.280797178113459,0,0.626719583092093,0,0,0.481764225311099,0.403599414382095,0.425846237690326,0.687010689511529,1.53620382154229,1.11838053946208,0,0.976940477010201,0.556812347790485,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,1.2558420511602,0.498635045700469,0,0,0,0,1.27149263184303,0,0,0,0.216388639742091,0.995261931078505,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,4.48105264715392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.345786262321089,0.484426936895553,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.8453114551668,0,0.281951753939561,0.515663103788617,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0,0,0.322944549180031,0.558672428662721,0,0,0.202117188958219,0,0.342233301085281,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr16:79123945..79123950,+ | |||
}} |
Latest revision as of 12:34, 25 July 2015
Short description: | p@chr16:79123945..79123950, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:79123945..79123950, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.62e-22 | 5 |
basophil mast progenitor cell | 7.62e-22 | 5 |
intermediate monocyte | 1.95e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.95e-18 | 9 |
myeloid lineage restricted progenitor cell | 1.44e-16 | 66 |
granulocyte monocyte progenitor cell | 2.77e-16 | 67 |
myeloid leukocyte | 5.52e-15 | 72 |
myeloid cell | 2.89e-12 | 108 |
common myeloid progenitor | 2.89e-12 | 108 |
endocrine cell | 3.17e-12 | 9 |
non-classical monocyte | 6.87e-10 | 3 |
CD14-low, CD16-positive monocyte | 6.87e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 2.55e-09 | 120 |
monopoietic cell | 3.07e-09 | 59 |
monocyte | 3.07e-09 | 59 |
monoblast | 3.07e-09 | 59 |
promonocyte | 3.07e-09 | 59 |
leukocyte | 3.31e-09 | 136 |
hematopoietic stem cell | 4.47e-09 | 168 |
classical monocyte | 6.05e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.05e-09 | 42 |
macrophage dendritic cell progenitor | 6.90e-09 | 61 |
hematopoietic cell | 1.93e-08 | 177 |
hematopoietic oligopotent progenitor cell | 2.32e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.32e-08 | 161 |
defensive cell | 1.09e-07 | 48 |
phagocyte | 1.09e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
blood | 8.88e-36 | 15 |
haemolymphatic fluid | 8.88e-36 | 15 |
organism substance | 8.88e-36 | 15 |
hematopoietic system | 1.41e-34 | 98 |
blood island | 1.41e-34 | 98 |
hemolymphoid system | 5.38e-31 | 108 |
bone marrow | 2.40e-16 | 76 |
bone element | 5.94e-15 | 82 |
lateral plate mesoderm | 1.88e-14 | 203 |
skeletal element | 2.21e-13 | 90 |
immune system | 7.33e-13 | 93 |
skeletal system | 9.08e-12 | 100 |
stroma of bone marrow | 3.83e-08 | 1 |
mesoderm | 1.09e-07 | 315 |
mesoderm-derived structure | 1.09e-07 | 315 |
presumptive mesoderm | 1.09e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
syndrome | 1.91e-08 | 1 |