FFCP PHASE1:Hg19::chr17:19287788..19287797,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:19287788..19287797,- | |||
|coexpression_cluster_id=C917 | |||
|description=CAGE_peak_at_chr17:19287788..19287797,- | |description=CAGE_peak_at_chr17:19287788..19287797,- | ||
|id=chr17:19287788..19287797,- | |id=chr17:19287788..19287797,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002569;2.91e-08;6!CL:0002575;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,2.81e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.05e-12;1!UBERON:0003852;1.05e-12;1!UBERON:0006242;2.46e-12;1!UBERON:0006965;8.52e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;7.19e-15;7!UBERON:0009142;7.19e-15;7!UBERON:0005705;1.05e-12;1!UBERON:0008193;1.05e-12;1!UBERON:0010912;1.05e-12;1!UBERON:0002514;1.05e-12;1!UBERON:0003457;1.05e-12;1!UBERON:0008907;1.05e-12;1!UBERON:0008001;1.05e-12;1!UBERON:0007213;1.05e-12;1!UBERON:0009891;1.05e-12;1!UBERON:0007914;1.05e-12;1!UBERON:0007375;1.05e-12;1!UBERON:0003323;1.05e-12;1!UBERON:0010258;1.05e-12;1!UBERON:0005253;1.05e-12;1!UBERON:0007842;1.05e-12;1!UBERON:0002397;1.05e-12;1!UBERON:0003113;1.05e-12;1!UBERON:0003277;1.05e-12;1!UBERON:0001709;1.05e-12;1!UBERON:0002244;1.05e-12;1!UBERON:0005620;1.05e-12;1!UBERON:0010364;1.05e-12;1!UBERON:0004288;1.05e-12;1!UBERON:0007029;2.46e-12;1!UBERON:0002171;2.46e-12;1!UBERON:0006518;2.46e-12;1!UBERON:0008949;2.46e-12;1!UBERON:0000101;2.46e-12;1!UBERON:0002167;2.46e-12;1!UBERON:0002346;3.45e-12;4!UBERON:0000923;3.45e-12;4!UBERON:0010316;3.45e-12;4!UBERON:0005291;3.45e-12;4!UBERON:0002050;6.22e-10;5!UBERON:0005423;6.22e-10;5!UBERON:0003422;2.91e-08;6!UBERON:0004089;5.57e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,9.92e-13,1;UBERON:0008193,9.92e-13,1;UBERON:0010912,9.92e-13,1;UBERON:0002514,9.92e-13,1;UBERON:0003457,9.92e-13,1;UBERON:0008907,9.92e-13,1;UBERON:0008001,9.92e-13,1;UBERON:0007213,9.92e-13,1;UBERON:0009891,9.92e-13,1;UBERON:0007914,9.92e-13,1;UBERON:0009292,9.92e-13,1;UBERON:0003099,9.92e-13,1;UBERON:0007375,9.92e-13,1;UBERON:0003323,9.92e-13,1;UBERON:0010258,9.92e-13,1;UBERON:0007842,9.92e-13,1;UBERON:0009494,9.92e-13,1;UBERON:0010042,9.92e-13,1;UBERON:0010045,9.92e-13,1;UBERON:0010259,9.92e-13,1;UBERON:0010359,9.92e-13,1;UBERON:0009526,9.92e-13,1;UBERON:0002397,9.92e-13,1;UBERON:0003113,9.92e-13,1;UBERON:0003277,9.92e-13,1;UBERON:0001709,9.92e-13,1;UBERON:0004066,9.92e-13,1;UBERON:0002244,9.92e-13,1;UBERON:0005620,9.92e-13,1;UBERON:0004362,9.92e-13,1;UBERON:0010364,9.92e-13,1;UBERON:0010046,9.92e-13,1;UBERON:0005868,9.92e-13,1;UBERON:0007238,9.92e-13,1;UBERON:0004288,9.92e-13,1;UBERON:0004068,9.92e-13,1;UBERON:0010334,9.92e-13,1;UBERON:0003852,9.92e-13,1;UBERON:0010253,9.92e-13,1;UBERON:0002171,1.40e-12,1;UBERON:0006518,1.40e-12,1;UBERON:0008949,1.40e-12,1;UBERON:0000101,1.40e-12,1;UBERON:0002167,1.40e-12,1;UBERON:0007029,2.46e-12,1;UBERON:0003422,2.81e-08,6;UBERON:0005253,5.41e-07,2;UBERON:0004089,5.41e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.986680828671798,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,0.354668382198357,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0,0,0.427114777637135,0.423863802319124,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0.920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,1.59562869950922,0,0,0,0,0.57191197463259,1.62786481617433,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0.500170521059677,0,0.415941723061614,0.356857977594324,0.157702415033935,0.468565659970853,0,6.82222512167955,2.0694614258501,0,0,0.521301686808497,0.979005787313703,1.02943027143257,0,0,0,0,0,0,0,0,0.280660094433074,0.384417447767103,0,0.965123526861645,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.322260734604821,0.435050081742686,0,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0.539617372749944,0,0.471249609382746,0,0,0,0,0,0,0.136499911407986,0.848432591722276,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.90392296312213,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,1.49502377594773,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.579684114443301,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.425149840203366,4.08988022054707,0,0.318004350653419,0,0,2.82140754952547,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,1.05522746615772,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.470958557103084,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,1.45713297917742,0,0,0,0,0,0,0.540219106755613,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | |phase1_expression=0.181678379270557,0.428201047781966,0.986680828671798,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,0.354668382198357,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0,0,0.427114777637135,0.423863802319124,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0.920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,1.59562869950922,0,0,0,0,0.57191197463259,1.62786481617433,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0.500170521059677,0,0.415941723061614,0.356857977594324,0.157702415033935,0.468565659970853,0,6.82222512167955,2.0694614258501,0,0,0.521301686808497,0.979005787313703,1.02943027143257,0,0,0,0,0,0,0,0,0.280660094433074,0.384417447767103,0,0.965123526861645,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.322260734604821,0.435050081742686,0,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0.539617372749944,0,0.471249609382746,0,0,0,0,0,0,0.136499911407986,0.848432591722276,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.90392296312213,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,1.49502377594773,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.579684114443301,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.425149840203366,4.08988022054707,0,0.318004350653419,0,0,2.82140754952547,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,1.05522746615772,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.470958557103084,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,1.45713297917742,0,0,0,0,0,0,0.540219106755613,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | ||
|short_description=p@chr17:19287788..19287797,- | |short_description=p@chr17:19287788..19287797,- | ||
}} | }} |
Latest revision as of 14:30, 25 July 2015
Short description: | p@chr17:19287788..19287797, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:19287788..19287797, - |
Coexpression cluster: | C917_Osteoblast_neuroectodermal_skin_normal_Adipocyte_Fibroblast_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 2.81e-08 | 6 |