FFCP PHASE1:Hg19::chr17:38673270..38673279,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002huv.2_5end | |association_with_transcript=0bp_to_uc002huv.2_5end | ||
|cluster_id=chr17:38673270..38673279,+ | |||
|description=CAGE_peak_3_at_uc002huv.2_5end | |description=CAGE_peak_3_at_uc002huv.2_5end | ||
|id=chr17:38673270..38673279,+ | |id=chr17:38673270..38673279,+ | ||
|ontology_enrichment_celltype=CL:0000838!6.49e-12!52;CL:0000542!1.33e-11!53;CL:0000051!1.33e-11!53;CL:0000084!1.09e-08!25;CL:0000827!1.09e-08!25;CL:0000842!2.04e-08!3;CL:0000893!5.64e-07!2;CL:0002489!5.64e-07!2;CL:0000809!5.64e-07!2;CL:0000808!5.64e-07!2;CL:0000894!5.64e-07!2;CL:0000806!5.64e-07!2;CL:0000807!5.64e-07!2;CL:0000805!5.64e-07!2;CL:0002425!5.64e-07!2 | |ontology_enrichment_celltype=CL:0000838!6.49e-12!52;CL:0000542!1.33e-11!53;CL:0000051!1.33e-11!53;CL:0000084!1.09e-08!25;CL:0000827!1.09e-08!25;CL:0000842!2.04e-08!3;CL:0000893!5.64e-07!2;CL:0002489!5.64e-07!2;CL:0000809!5.64e-07!2;CL:0000808!5.64e-07!2;CL:0000894!5.64e-07!2;CL:0000806!5.64e-07!2;CL:0000807!5.64e-07!2;CL:0000805!5.64e-07!2;CL:0002425!5.64e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.37e-29;1!CL:0000911;2.37e-29;1!CL:0000814;2.37e-29;1!CL:0000244;2.26e-08;4!CL:0000731;2.26e-08;4!CL:0000312;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.78e-29,1;CL:0000914,1.78e-29,1;CL:0000911,1.78e-29,1;CL:0000814,1.78e-29,1;CL:0002042,1.78e-29,1;CL:0002039,1.78e-29,1;CL:0002040,1.78e-29,1;CL:0002041,1.78e-29,1;CL:0000893,1.78e-15,2;CL:0002489,1.78e-15,2;CL:0000809,1.78e-15,2;CL:0000808,1.78e-15,2;CL:0000894,1.78e-15,2;CL:0000806,1.78e-15,2;CL:0000807,1.78e-15,2;CL:0000805,1.78e-15,2;CL:0002425,1.78e-15,2;CL:0000244,1.96e-08,4;CL:0000731,1.96e-08,4;CL:0000312,6.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002425;2.05e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.11e-08,4;UBERON:0005058,2.11e-08,4;UBERON:0009113,2.11e-08,4;UBERON:0003295,2.11e-08,4;UBERON:0005562,2.11e-08,4;UBERON:0000365,5.38e-07,5 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0.157421562627358,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0,0,0.786021525498329,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.896639238079726,0.130059347559878,0.493313713811028,0.552700035571697,0.869409257205157,0.14828656316206,0,0,2.94604291013672,0.766440987203842,1.37450978193052,2.02415753615602,0,0,0,0,0.255973222308837,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.219500570817251,1.1240175325762,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,1.56919201590938,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,1.02090169995667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p3@uc002huv.2 | |short_description=p3@uc002huv.2 | ||
}} | }} |
Latest revision as of 16:32, 25 July 2015
Short description: | p3@uc002huv.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc002huv.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002huv.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.78e-29 | 1 |
immature NK T cell | 1.78e-29 | 1 |
effector T cell | 1.78e-29 | 1 |
mature NK T cell | 1.78e-29 | 1 |
immature NK T cell stage IV | 1.78e-29 | 1 |
immature NK T cell stage I | 1.78e-29 | 1 |
immature NK T cell stage II | 1.78e-29 | 1 |
immature NK T cell stage III | 1.78e-29 | 1 |
thymocyte | 1.78e-15 | 2 |
double negative thymocyte | 1.78e-15 | 2 |
double-positive, alpha-beta thymocyte | 1.78e-15 | 2 |
DN4 thymocyte | 1.78e-15 | 2 |
DN1 thymic pro-T cell | 1.78e-15 | 2 |
DN2 thymocyte | 1.78e-15 | 2 |
DN3 thymocyte | 1.78e-15 | 2 |
immature single positive thymocyte | 1.78e-15 | 2 |
early T lineage precursor | 1.78e-15 | 2 |
transitional epithelial cell | 1.96e-08 | 4 |
urothelial cell | 1.96e-08 | 4 |
keratinocyte | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.11e-08 | 4 |
hemolymphoid system gland | 2.11e-08 | 4 |
thymic region | 2.11e-08 | 4 |
pharyngeal gland | 2.11e-08 | 4 |
thymus primordium | 2.11e-08 | 4 |
urothelium | 5.38e-07 | 5 |