FFCP PHASE1:Hg19::chr19:13134126..13134136,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13134126..13134136,+ | |||
|description=CAGE_peak_at_chr19:13134126..13134136,+ | |description=CAGE_peak_at_chr19:13134126..13134136,+ | ||
|id=chr19:13134126..13134136,+ | |id=chr19:13134126..13134136,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.25e-10!180;CL:0002620!8.27e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.25e-10!180;CL:0002620!8.27e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.42e-19;1!CL:0002372;1.42e-19;1!CL:0002262;2.72e-10;2!CL:1000398;2.72e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.30e-19,1;CL:0002372,1.30e-19,1;CL:0002262,2.49e-10,2;CL:1000398,2.49e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.79e-07;3!UBERON:0003057;2.79e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.79e-07;3!DOID:127;2.79e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.35e-07,3;DOID:127,3.35e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.82e-12!57;UBERON:0005068!3.82e-12!57;UBERON:0006241!3.82e-12!57;UBERON:0007135!3.82e-12!57;UBERON:0002346!3.93e-12!90;UBERON:0000073!1.12e-11!94;UBERON:0001016!1.12e-11!94;UBERON:0001017!2.76e-11!82;UBERON:0000955!3.18e-11!69;UBERON:0006238!3.18e-11!69;UBERON:0001893!5.52e-11!34;UBERON:0005743!9.98e-11!86;UBERON:0002791!2.31e-10!33;UBERON:0000475!2.53e-10!365;UBERON:0002616!2.66e-10!59;UBERON:0003075!3.99e-10!86;UBERON:0007284!3.99e-10!86;UBERON:0001869!5.05e-10!32;UBERON:0001950!6.59e-10!20;UBERON:0002619!6.82e-10!22;UBERON:0000924!7.43e-10!173;UBERON:0006601!7.43e-10!173;UBERON:0002780!8.18e-10!41;UBERON:0001890!8.18e-10!41;UBERON:0006240!8.18e-10!41;UBERON:0003080!2.12e-09!42;UBERON:0000956!4.46e-09!25;UBERON:0000203!4.46e-09!25;UBERON:0002020!7.02e-09!34;UBERON:0003528!7.02e-09!34;UBERON:0004121!2.23e-08!169;UBERON:0000153!5.97e-08!129;UBERON:0007811!5.97e-08!129;UBERON:0000033!7.07e-08!123;UBERON:0003056!5.66e-07!61 | |ontology_enrichment_uberon=UBERON:0001049!3.82e-12!57;UBERON:0005068!3.82e-12!57;UBERON:0006241!3.82e-12!57;UBERON:0007135!3.82e-12!57;UBERON:0002346!3.93e-12!90;UBERON:0000073!1.12e-11!94;UBERON:0001016!1.12e-11!94;UBERON:0001017!2.76e-11!82;UBERON:0000955!3.18e-11!69;UBERON:0006238!3.18e-11!69;UBERON:0001893!5.52e-11!34;UBERON:0005743!9.98e-11!86;UBERON:0002791!2.31e-10!33;UBERON:0000475!2.53e-10!365;UBERON:0002616!2.66e-10!59;UBERON:0003075!3.99e-10!86;UBERON:0007284!3.99e-10!86;UBERON:0001869!5.05e-10!32;UBERON:0001950!6.59e-10!20;UBERON:0002619!6.82e-10!22;UBERON:0000924!7.43e-10!173;UBERON:0006601!7.43e-10!173;UBERON:0002780!8.18e-10!41;UBERON:0001890!8.18e-10!41;UBERON:0006240!8.18e-10!41;UBERON:0003080!2.12e-09!42;UBERON:0000956!4.46e-09!25;UBERON:0000203!4.46e-09!25;UBERON:0002020!7.02e-09!34;UBERON:0003528!7.02e-09!34;UBERON:0004121!2.23e-08!169;UBERON:0000153!5.97e-08!129;UBERON:0007811!5.97e-08!129;UBERON:0000033!7.07e-08!123;UBERON:0003056!5.66e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.05e-15;5!UBERON:0001281;2.72e-10;2!UBERON:0003497;2.72e-10;2!UBERON:0003909;2.72e-10;2!UBERON:0003835;2.72e-10;2!UBERON:0001950;1.90e-08;20!UBERON:0002619;9.22e-08;22!UBERON:0002240;2.79e-07;3!UBERON:0005174;2.79e-07;3!UBERON:0001280;2.79e-07;3!UBERON:0004647;2.79e-07;3!UBERON:0001137;2.79e-07;3!UBERON:0000956;6.30e-07;25!UBERON:0000203;6.30e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.05e-15,5;UBERON:0001281,2.49e-10,2;UBERON:0003497,2.49e-10,2;UBERON:0003909,2.49e-10,2;UBERON:0003835,2.49e-10,2;UBERON:0001950,2.00e-08,20;UBERON:0002619,9.66e-08,22;UBERON:0001017,1.05e-07,81;UBERON:0002240,2.47e-07,3;UBERON:0005174,2.47e-07,3;UBERON:0001137,2.47e-07,3;UBERON:0001280,2.63e-07,3;UBERON:0004647,2.63e-07,3;UBERON:0005171,2.63e-07,3;UBERON:0001016,6.25e-07,89;UBERON:0000956,6.56e-07,25;UBERON:0000203,6.56e-07,25 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.816002764977012,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.487185025805993,0.252433774244115,0.552299391853796,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,2.85273810081437,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0,0,0,0.24538298343828,0,0.271265023699736,0.623912584592421,0,0,0.234282829985426,1.20378439891088,0,0,0,0.368738337083406,0.434418072340414,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.574890092096664,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.322260734604821,0.145016693914229,0,0.356128142586949,0,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0.95460974377781,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0.7133421029625,0.709522128141196,0.844430541190656,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0.969332746095218,0,1.99613798001194,0,0.174919999992391,0,0,0,0,0,0,0,0.885741385813839,0,0,0.663475559587348,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0.941798755221676,0,0,0.832048038078832,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0.264768380074501,0.451961481561065,0.411125773940253,0.596143835108969,0.189932387867636,0,0,0,0,0,0.114536596165916,0,0,0,0,0.67952103036807,0.313808538937,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0.105600336519406,0,0,0.714695326373367,0,0,1.08599920350743,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0.157054096250234,0.886068179966986,0.610131324509816,0.250381861413,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.318593534327405,0,0.155262956876259,0,0.797525143673985,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0.57785949122191,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0.127894371303652,0.215649622793364,0.157265941855896,0,0.169732529954025,0.637724760305049,0.247871528518004,0,0.318004350653419,0.0788617450012534,0,0,0,0.385375350578757,0,0.159633859057151,7.17907274842643,4.78936222821264,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0.40341013740704,0,0,0,0,0.270150338473579,0,0,0.507326481551255,1.09394961803644,0,0,0.527613733078862,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,0,0,0.467878926924211,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0,1.6906229103336,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0.473314686579554,0.543931921527318,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0.179650404213174,0,0,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.816002764977012,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.487185025805993,0.252433774244115,0.552299391853796,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,2.85273810081437,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0,0,0,0.24538298343828,0,0.271265023699736,0.623912584592421,0,0,0.234282829985426,1.20378439891088,0,0,0,0.368738337083406,0.434418072340414,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.574890092096664,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.322260734604821,0.145016693914229,0,0.356128142586949,0,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0.95460974377781,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0.7133421029625,0.709522128141196,0.844430541190656,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0.969332746095218,0,1.99613798001194,0,0.174919999992391,0,0,0,0,0,0,0,0.885741385813839,0,0,0.663475559587348,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0.941798755221676,0,0,0.832048038078832,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0.264768380074501,0.451961481561065,0.411125773940253,0.596143835108969,0.189932387867636,0,0,0,0,0,0.114536596165916,0,0,0,0,0.67952103036807,0.313808538937,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0.105600336519406,0,0,0.714695326373367,0,0,1.08599920350743,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0.157054096250234,0.886068179966986,0.610131324509816,0.250381861413,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.318593534327405,0,0.155262956876259,0,0.797525143673985,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0.57785949122191,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0.127894371303652,0.215649622793364,0.157265941855896,0,0.169732529954025,0.637724760305049,0.247871528518004,0,0.318004350653419,0.0788617450012534,0,0,0,0.385375350578757,0,0.159633859057151,7.17907274842643,4.78936222821264,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0.40341013740704,0,0,0,0,0.270150338473579,0,0,0.507326481551255,1.09394961803644,0,0,0.527613733078862,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,0,0,0.467878926924211,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0,1.6906229103336,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0.473314686579554,0.543931921527318,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0.179650404213174,0,0,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p@chr19:13134126..13134136,+ | |short_description=p@chr19:13134126..13134136,+ | ||
}} | }} |
Latest revision as of 03:56, 26 July 2015
Short description: | p@chr19:13134126..13134136, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13134126..13134136, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.30e-19 | 1 |
myotube | 1.30e-19 | 1 |
endothelial cell of sinusoid | 2.49e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.49e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.05e-15 | 5 |
hepatic sinusoid | 2.49e-10 | 2 |
abdomen blood vessel | 2.49e-10 | 2 |
sinusoid | 2.49e-10 | 2 |
abdominal segment blood vessel | 2.49e-10 | 2 |
neocortex | 2.00e-08 | 20 |
regional part of cerebral cortex | 9.66e-08 | 22 |
central nervous system | 1.05e-07 | 81 |
spinal cord | 2.47e-07 | 3 |
dorsal region element | 2.47e-07 | 3 |
dorsum | 2.47e-07 | 3 |
liver parenchyma | 2.63e-07 | 3 |
liver lobule | 2.63e-07 | 3 |
hepatic duct | 2.63e-07 | 3 |
nervous system | 6.25e-07 | 89 |
cerebral cortex | 6.56e-07 | 25 |
pallium | 6.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.35e-07 | 3 |
leiomyoma | 3.35e-07 | 3 |