FFCP PHASE1:Hg19::chr19:47234972..47234989,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:47234972..47234989,-
|short_description=p@chr19:47234972..47234989,-
|description=CAGE_peak_at_chr19:47234972..47234989,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:47234972..47234989,- | |||
|coexpression_cluster_id=C3806 | |||
|description=CAGE_peak_at_chr19:47234972..47234989,- | |||
|id=chr19:47234972..47234989,- | |||
|ontology_enrichment_celltype=CL:0002057!1.86e-61!42;CL:0000860!2.09e-56!45;CL:0000766!2.37e-51!76;CL:0002194!4.57e-46!63;CL:0000576!4.57e-46!63;CL:0000040!4.57e-46!63;CL:0000559!4.57e-46!63;CL:0002009!3.33e-44!65;CL:0000839!5.17e-40!70;CL:0000557!3.02e-39!71;CL:0000763!1.69e-36!112;CL:0000049!1.69e-36!112;CL:0000738!1.49e-30!140;CL:0000037!1.79e-24!172;CL:0000566!1.79e-24!172;CL:0002087!1.87e-24!119;CL:0000988!4.24e-22!182;CL:0002032!6.87e-22!165;CL:0000837!6.87e-22!165;CL:0002031!2.64e-19!124;CL:0002393!9.99e-17!9;CL:0002397!9.99e-17!9;CL:0000094!1.83e-11!8;CL:0000081!6.37e-08!11;CL:0000875!6.63e-07!3;CL:0002396!6.63e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.21e-48;48!CL:0000860;6.30e-40;33!CL:0002057;6.30e-40;33!CL:0000766;7.15e-34;69!CL:0002393;2.97e-27;6!CL:0002397;2.97e-27;6!CL:0000473;9.79e-26;39!CL:0000234;9.79e-26;39!CL:0000094;6.44e-21;8!CL:0000763;3.56e-18;100!CL:0000875;3.33e-15;3!CL:0002396;3.33e-15;3!CL:0000081;4.78e-15;11!CL:0000767;1.64e-14;3!CL:0002087;2.22e-12;104!CL:0000738;2.74e-11;136!CL:0000775;2.33e-07;3!CL:0000226;9.06e-07;3!CL:0002619;9.06e-07;3!CL:0000842;9.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.30e-75,42;CL:0002057,4.30e-75,42;CL:0000766,4.33e-71,72;CL:0000473,6.38e-65,48;CL:0000234,6.38e-65,48;CL:0002194,1.15e-58,59;CL:0000576,1.15e-58,59;CL:0000040,1.15e-58,59;CL:0000559,1.15e-58,59;CL:0002009,1.48e-56,61;CL:0000839,7.67e-52,66;CL:0000557,5.55e-51,67;CL:0000763,6.07e-48,108;CL:0000049,6.07e-48,108;CL:0002393,9.86e-41,9;CL:0002397,9.86e-41,9;CL:0000738,5.48e-39,136;CL:0000037,4.93e-32,168;CL:0002087,1.59e-31,115;CL:0000988,5.12e-30,177;CL:0002032,9.23e-30,161;CL:0000837,9.23e-30,161;CL:0002031,9.70e-26,120;CL:0000094,5.25e-21,8;CL:0000875,2.45e-15,3;CL:0002396,2.45e-15,3;CL:0000081,4.13e-15,11;CL:0000767,1.53e-14,3;CL:0000134,4.36e-11,354;CL:0002320,1.02e-10,361;CL:0000219,2.04e-09,386;CL:0000048,7.94e-08,427;CL:0000723,1.32e-07,433;CL:0000775,2.02e-07,3;CL:0000034,2.53e-07,441;CL:0000226,7.36e-07,3;CL:0000842,7.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.93e-52;42!CL:0000049;7.84e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-44!102;UBERON:0003061!1.33e-44!102;UBERON:0002193!1.42e-40!112;UBERON:0002371!3.27e-33!80;UBERON:0001474!6.74e-30!86;UBERON:0002405!9.92e-26!115;UBERON:0004765!1.26e-24!101;UBERON:0001434!1.26e-24!101;UBERON:0002619!1.87e-19!22;UBERON:0001893!1.31e-18!34;UBERON:0001869!1.86e-18!32;UBERON:0002791!1.80e-17!33;UBERON:0001950!1.11e-16!20;UBERON:0000956!1.37e-16!25;UBERON:0000203!1.37e-16!25;UBERON:0003081!2.50e-15!216;UBERON:0002020!2.72e-15!34;UBERON:0003528!2.72e-15!34;UBERON:0007023!4.05e-15!115;UBERON:0002780!2.18e-14!41;UBERON:0001890!2.18e-14!41;UBERON:0006240!2.18e-14!41;UBERON:0003080!6.69e-14!42;UBERON:0000178!1.15e-11!15;UBERON:0000179!1.15e-11!15;UBERON:0000463!1.15e-11!15;UBERON:0002204!1.48e-11!167;UBERON:0000200!1.26e-09!6;UBERON:0003056!1.92e-09!61;UBERON:0002616!4.43e-09!59;UBERON:0001049!1.05e-08!57;UBERON:0005068!1.05e-08!57;UBERON:0006241!1.05e-08!57;UBERON:0007135!1.05e-08!57;UBERON:0000349!2.05e-08!5;UBERON:0000955!2.61e-08!69;UBERON:0006238!2.61e-08!69;UBERON:0001017!2.26e-07!82;UBERON:0001871!5.78e-07!7;UBERON:0003075!8.06e-07!86;UBERON:0007284!8.06e-07!86;UBERON:0005743!9.72e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.02e-44,76;UBERON:0002390,7.04e-41,98;UBERON:0003061,7.04e-41,98;UBERON:0001474,1.44e-40,82;UBERON:0002193,1.78e-36,108;UBERON:0004765,2.04e-36,90;UBERON:0002405,4.84e-35,93;UBERON:0001434,3.75e-32,100;UBERON:0002204,1.09e-16,167;UBERON:0003081,3.56e-16,203;UBERON:0002384,3.26e-10,371;UBERON:0000926,5.82e-08,315;UBERON:0004120,5.82e-08,315;UBERON:0006603,5.82e-08,315 | |||
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| ||
|short_description=p@chr19:47234972..47234989,- | |||
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Latest revision as of 15:21, 27 July 2015
Short description: | p@chr19:47234972..47234989, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47234972..47234989, - |
Coexpression cluster: | C3806_CD14_Eosinophils_CD14CD16_Neutrophils_Whole_lymph_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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bone marrow | 3.02e-44 | 76 |
hematopoietic system | 7.04e-41 | 98 |
blood island | 7.04e-41 | 98 |
bone element | 1.44e-40 | 82 |
hemolymphoid system | 1.78e-36 | 108 |
skeletal element | 2.04e-36 | 90 |
immune system | 4.84e-35 | 93 |
skeletal system | 3.75e-32 | 100 |
musculoskeletal system | 1.09e-16 | 167 |
lateral plate mesoderm | 3.56e-16 | 203 |
connective tissue | 3.26e-10 | 371 |
mesoderm | 5.82e-08 | 315 |
mesoderm-derived structure | 5.82e-08 | 315 |
presumptive mesoderm | 5.82e-08 | 315 |