FFCP PHASE1:Hg19::chr19:49469909..49469927,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=208bp_to_BC007552_5end | |association_with_transcript=208bp_to_BC007552_5end | ||
|cluster_id=chr19:49469909..49469927,- | |||
|coexpression_cluster_id=C467 | |||
|description=CAGE_peak_3_at_BC007552_5end | |description=CAGE_peak_3_at_BC007552_5end | ||
|id=chr19:49469909..49469927,- | |id=chr19:49469909..49469927,- | ||
|ontology_enrichment_celltype=CL:0002194!3.84e-16!63;CL:0000576!3.84e-16!63;CL:0000040!3.84e-16!63;CL:0000559!3.84e-16!63;CL:0002009!1.42e-15!65;CL:0000839!1.99e-13!70;CL:0000048!7.47e-13!430;CL:0000557!2.66e-12!71;CL:0000144!5.89e-12!625;CL:0002371!7.27e-12!591;CL:0000723!7.56e-12!436;CL:0000034!2.25e-11!444;CL:0002057!2.55e-11!42;CL:0000766!2.75e-11!76;CL:0000548!9.91e-11!679;CL:0000004!9.91e-11!679;CL:0000255!9.91e-11!679;CL:0000012!2.56e-10!682;CL:0000860!4.69e-10!45;CL:0002320!1.07e-08!365;CL:0000134!8.02e-08!358;CL:0000763!2.05e-07!112;CL:0000049!2.05e-07!112;CL:0000003!2.33e-07!722;CL:0000222!9.10e-07!119 | |ontology_enrichment_celltype=CL:0002194!3.84e-16!63;CL:0000576!3.84e-16!63;CL:0000040!3.84e-16!63;CL:0000559!3.84e-16!63;CL:0002009!1.42e-15!65;CL:0000839!1.99e-13!70;CL:0000048!7.47e-13!430;CL:0000557!2.66e-12!71;CL:0000144!5.89e-12!625;CL:0002371!7.27e-12!591;CL:0000723!7.56e-12!436;CL:0000034!2.25e-11!444;CL:0002057!2.55e-11!42;CL:0000766!2.75e-11!76;CL:0000548!9.91e-11!679;CL:0000004!9.91e-11!679;CL:0000255!9.91e-11!679;CL:0000012!2.56e-10!682;CL:0000860!4.69e-10!45;CL:0002320!1.07e-08!365;CL:0000134!8.02e-08!358;CL:0000763!2.05e-07!112;CL:0000049!2.05e-07!112;CL:0000003!2.33e-07!722;CL:0000222!9.10e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.05e-12;48!CL:0000473;2.09e-12;39!CL:0000234;2.09e-12;39!CL:0000235;4.87e-10;6!CL:0000860;6.15e-10;33!CL:0002057;6.15e-10;33!CL:0000766;1.12e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.06e-27,59;CL:0000576,6.06e-27,59;CL:0000040,6.06e-27,59;CL:0000559,6.06e-27,59;CL:0002009,1.29e-25,61;CL:0000839,8.55e-24,66;CL:0000473,1.32e-22,48;CL:0000234,1.32e-22,48;CL:0000557,4.02e-22,67;CL:0000766,4.25e-22,72;CL:0000860,6.68e-16,42;CL:0002057,6.68e-16,42;CL:0000048,3.54e-15,427;CL:0000723,1.64e-14,433;CL:0000034,3.62e-14,441;CL:0002320,1.31e-13,361;CL:0000134,1.27e-12,354;CL:0000763,4.83e-11,108;CL:0000049,4.83e-11,108;CL:0000235,5.19e-10,6;CL:0000219,1.22e-09,386;CL:0002087,1.89e-08,115;CL:0002031,3.92e-08,120;CL:0002393,3.11e-07,9;CL:0002397,3.11e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.13e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.80e-15!167;UBERON:0002371!4.17e-13!80;UBERON:0004765!1.63e-12!101;UBERON:0001434!1.63e-12!101;UBERON:0001474!8.79e-12!86;UBERON:0002405!2.59e-11!115;UBERON:0003081!2.26e-10!216;UBERON:0002390!9.07e-10!102;UBERON:0003061!9.07e-10!102;UBERON:0002193!9.41e-10!112;UBERON:0000926!1.24e-09!448;UBERON:0004120!1.24e-09!448;UBERON:0006603!1.24e-09!448;UBERON:0002384!2.23e-08!375 | |ontology_enrichment_uberon=UBERON:0002204!1.80e-15!167;UBERON:0002371!4.17e-13!80;UBERON:0004765!1.63e-12!101;UBERON:0001434!1.63e-12!101;UBERON:0001474!8.79e-12!86;UBERON:0002405!2.59e-11!115;UBERON:0003081!2.26e-10!216;UBERON:0002390!9.07e-10!102;UBERON:0003061!9.07e-10!102;UBERON:0002193!9.41e-10!112;UBERON:0000926!1.24e-09!448;UBERON:0004120!1.24e-09!448;UBERON:0006603!1.24e-09!448;UBERON:0002384!2.23e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,1.04e-22,100;UBERON:0004765,3.48e-22,90;UBERON:0002371,3.69e-22,76;UBERON:0001474,1.51e-20,82;UBERON:0002204,2.06e-19,167;UBERON:0002390,9.49e-18,98;UBERON:0003061,9.49e-18,98;UBERON:0002405,2.34e-17,93;UBERON:0000926,7.82e-17,315;UBERON:0004120,7.82e-17,315;UBERON:0006603,7.82e-17,315;UBERON:0002193,2.20e-16,108;UBERON:0003081,1.23e-13,203;UBERON:0002384,1.75e-12,371;UBERON:0002050,7.81e-08,564;UBERON:0000923,1.06e-07,560;UBERON:0010316,1.06e-07,560;UBERON:0005291,1.06e-07,560;UBERON:0006598,1.06e-07,560;UBERON:0010317,1.06e-07,560;UBERON:0002532,1.06e-07,560 | |||
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|phase1_expression=1.2717486548939,0.428201047781966,0.704772020479856,5.00366491765652,2.68176656656373,3.48935409640147,2.53299878168311,1.89515962028049,1.82829939739887,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,2.84662611808107,2.98257638155124,2.01697543935533,0,0.730310090387373,0.975865597581014,0.123121058076788,0.612002073732759,0.940364164434263,0,0,0.502170558379211,0,0,0,0.393364276848904,0,1.08371286321253,0,0.30120591877825,0.739508020333575,0.154934401160603,0,0,1.10799081706375,0.200544447470142,0.651032612147555,14.1066748771152,11.3362783106643,9.5302960024649,2.03557534291391,0.755751887377619,1.4555043671269,0.697287110717054,0,4.02618282163635,1.1507695692886,2.30544635876191,1.89185783910868,1.37898272294647,0,0,0.564727018627814,2.18324920046277,4.26974620445661,3.06083892370903,2.56743221660875,2.55734850319616,0.659702600373432,2.19410023383795,0.426224750532694,0.290209238628584,1.13477044938228,0,2.51248665256743,1.5644487552606,1.95469960234605,0.605399502633369,0.736555271975129,1.89877432464531,2.5350634357433,5.31510749912609,4.40283155567589,3.48218756554135,2.70318407114711,0.32145117339416,3.13514018115373,5.56966696157452,5.84525292046829,0,0.546138611262131,0.889509253863555,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0.393010762749165,0,0.167186495390678,0,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0,0.128091319725675,0.520237390239513,0,0.552700035571697,0.289803085735052,0.14828656316206,0.535081656179426,0,0,0,0,0.506039384039006,0,0,0.950452044448374,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,0.722878304769133,1.00267582127178,1.30361867064741,0,1.45990461090791,0.189069634328136,0.443458794925128,0.43917392846563,0.392937226493138,0.364295288292542,0.741568885568859,12.332800958878,11.1443031871531,10.9025527625469,1.66943437013739,0,0,0.198762407366705,0,0.347140501607594,0,1.25849830862972,1.6507082516404,0.835979866147242,0.775250277507987,0,0.33472061276467,0.402829317109147,0.760272105718513,0.976248230192678,0,0,0,0.44905874525234,0.112611480483322,3.06633274931766,0,0.916008719652036,0,0,0.436094052142534,0,0.12663051166458,0.397227542439656,0.286836620748814,1.41867352879343,1.12135520028461,1.06748995729705,1.72667283892012,0,0.538842688278752,1.9615428373615,0,1.72852777344,0.234321431833797,1.5608003841516,0,2.09228152772521,0.117434498643765,0,0.140450806702248,0.408308342509787,0.368502951935304,1.23990937410919,1.18800285728205,1.7308685049499,0,1.43723628363248,0.841680569770331,0,0,0,3.0648779579902,1.05166641234618,1.24775401476023,0,0.85422955527427,0.423863802319124,0,0,0,0.37223371266318,0,0.0974370051611986,0,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0.966304265816484,0,0,0.365921118388786,0,0.116193942869518,0.207322110030741,1.51392510525377,0.36497735907583,0,3.21620469096443,0,1.85747171212792,3.60939740834793,0.946454400318751,0.674338760312407,0.964044119533928,0.55146986366197,0.871517776369625,0,0.539325232640658,0.196221465125346,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,1.54411029268673,0.219500570817251,0,0,0,1.95484983186195,6.23960871167747,0,0.811512834825538,0.234817388471643,0.577465791044295,1.38895653772983,0.380508304469197,0,0.858486162094873,10.3411142556707,5.38209809820247,20.6597315581332,1.87467667973554,0,0.283550194484773,0,0,0,0,0.264145302039678,0,0,0,0.444485260045183,0.763976851116555,0,0,0.822619941626588,0.600686115687835,0.285826432630578,0,0,0.1466765716419,0.387815147273333,17.8828222925941,1.690605505112,0.531876233169741,0,0.771622122786426,1.41849132023278,1.0656887160644,2.28764789853036,2.17048642156577,0,0.977208552881205,4.6200953336531,4.75171123760058,0.904318131178758,0.871533458600294,0.499864955910285,21.8922805154143,13.0586843772353,10.5416969741516,0.479249710983165,0,0,0.579125226670317,1.02738161275192,0.179060963239896,0.448340575974109,0.197030760201927,0,0.513372145118994,0,0,0.773288812777695,0,0,0,2.99161459204025,0,0.613457458595699,3.00102312635806,0.813795071099207,1.45579603071565,0.892144943985809,1.89242898040722,0.819989904948992,0.601892199455438,2.27407504055985,3.10419213877515,0,0.921845842708516,0.347534457872331,0.391602314925481,0,0,0.431428401637234,0.320182673410333,4.24378600024763,1.66435439510497,0.604780586659361,1.48864684691266,0,2.80660094433074,1.02511319404561,2.04682899626681,1.12597744800525,4.45254199334973,0.308419387605311,2.13074070375753,0.328508624055237,0,1.04589340613963,1.20859449591622,0.40101294060657,0.368323955743585,1.7222167224691,0.364182336013434,0.917870904715969,0,0.385076685522074,0,0,0.211103257785751,2.27466768141793,1.53084334748864,0.215915916102139,0,0,2.00675909541941,0.254876273045038,0.831076008928724,0.671624264166535,0.219259876645935,1.0457418040996,1.53870075069834,0,0.650756789328606,0.412164046590889,0.27470839445503,0,0,0,3.21367859688319,0,1.07834031980251,0.767518373630648,0.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| ||
|short_description=p3@BC007552 | |short_description=p3@BC007552 | ||
}} | }} |
Latest revision as of 15:57, 27 July 2015
Short description: | p3@BC007552 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC007552_5end |
Coexpression cluster: | C467_CD14_Monocytederived_Mesenchymal_Macrophage_Dendritic_mucinous_liver |
Association with transcript: | 208bp_to_BC007552_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.06e-27 | 59 |
monocyte | 6.06e-27 | 59 |
monoblast | 6.06e-27 | 59 |
promonocyte | 6.06e-27 | 59 |
macrophage dendritic cell progenitor | 1.29e-25 | 61 |
myeloid lineage restricted progenitor cell | 8.55e-24 | 66 |
defensive cell | 1.32e-22 | 48 |
phagocyte | 1.32e-22 | 48 |
granulocyte monocyte progenitor cell | 4.02e-22 | 67 |
myeloid leukocyte | 4.25e-22 | 72 |
classical monocyte | 6.68e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.68e-16 | 42 |
multi fate stem cell | 3.54e-15 | 427 |
somatic stem cell | 1.64e-14 | 433 |
stem cell | 3.62e-14 | 441 |
connective tissue cell | 1.31e-13 | 361 |
mesenchymal cell | 1.27e-12 | 354 |
myeloid cell | 4.83e-11 | 108 |
common myeloid progenitor | 4.83e-11 | 108 |
macrophage | 5.19e-10 | 6 |
motile cell | 1.22e-09 | 386 |
nongranular leukocyte | 1.89e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.92e-08 | 120 |
intermediate monocyte | 3.11e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.11e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 1.04e-22 | 100 |
skeletal element | 3.48e-22 | 90 |
bone marrow | 3.69e-22 | 76 |
bone element | 1.51e-20 | 82 |
musculoskeletal system | 2.06e-19 | 167 |
hematopoietic system | 9.49e-18 | 98 |
blood island | 9.49e-18 | 98 |
immune system | 2.34e-17 | 93 |
mesoderm | 7.82e-17 | 315 |
mesoderm-derived structure | 7.82e-17 | 315 |
presumptive mesoderm | 7.82e-17 | 315 |
hemolymphoid system | 2.20e-16 | 108 |
lateral plate mesoderm | 1.23e-13 | 203 |
connective tissue | 1.75e-12 | 371 |
embryonic structure | 7.81e-08 | 564 |
germ layer | 1.06e-07 | 560 |
germ layer / neural crest | 1.06e-07 | 560 |
embryonic tissue | 1.06e-07 | 560 |
presumptive structure | 1.06e-07 | 560 |
germ layer / neural crest derived structure | 1.06e-07 | 560 |
epiblast (generic) | 1.06e-07 | 560 |