FFCP PHASE1:Hg19::chr19:49469928..49469955,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49469928..49469955,-
|short_description=p1@BC007552
|description=CAGE_peak_1_at_BC007552_5end
|association_with_transcript=180bp_to_BC007552_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=180bp_to_BC007552_5end | |||
|cluster_id=chr19:49469928..49469955,- | |||
|coexpression_cluster_id=C467 | |||
|description=CAGE_peak_1_at_BC007552_5end | |||
|id=chr19:49469928..49469955,- | |||
|ontology_enrichment_celltype=CL:0002194!3.31e-15!63;CL:0000576!3.31e-15!63;CL:0000040!3.31e-15!63;CL:0000559!3.31e-15!63;CL:0002371!3.64e-14!591;CL:0002009!4.70e-14!65;CL:0000048!6.95e-14!430;CL:0000723!2.78e-13!436;CL:0000034!7.77e-13!444;CL:0000144!1.95e-12!625;CL:0000839!2.20e-12!70;CL:0002057!2.53e-12!42;CL:0000222!3.71e-11!119;CL:0000860!6.18e-11!45;CL:0000557!7.66e-11!71;CL:0000766!4.50e-10!76;CL:0000548!3.19e-09!679;CL:0000004!3.19e-09!679;CL:0000255!3.19e-09!679;CL:0000012!6.63e-09!682;CL:0000183!7.03e-09!59;CL:0002320!1.34e-08!365;CL:0000680!1.30e-07!57;CL:0000056!1.30e-07!57;CL:0000355!1.30e-07!57;CL:0000192!1.47e-07!42;CL:0000514!1.47e-07!42;CL:0000187!1.93e-07!54;CL:0000134!4.53e-07!358;CL:0000003!8.09e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.62e-11;39!CL:0000234;5.62e-11;39!CL:0000576;1.18e-09;48!CL:0000860;1.63e-09;33!CL:0002057;1.63e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.56e-17,59;CL:0000576,1.56e-17,59;CL:0000040,1.56e-17,59;CL:0000559,1.56e-17,59;CL:0000473,1.02e-16,48;CL:0000234,1.02e-16,48;CL:0002009,3.76e-16,61;CL:0000048,2.64e-14,427;CL:0000839,3.47e-14,66;CL:0000723,8.80e-14,433;CL:0000034,3.17e-13,441;CL:0000860,9.62e-13,42;CL:0002057,9.62e-13,42;CL:0000557,1.29e-12,67;CL:0000766,5.06e-12,72;CL:0000222,7.63e-12,121;CL:0002320,8.52e-09,361;CL:0000680,7.33e-08,58;CL:0000056,7.33e-08,58;CL:0000355,7.33e-08,58;CL:0000187,1.15e-07,55;CL:0000192,1.53e-07,43;CL:0000514,1.53e-07,43;CL:0000134,3.68e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!9.27e-19!216;UBERON:0000926!4.71e-18!448;UBERON:0004120!4.71e-18!448;UBERON:0006603!4.71e-18!448;UBERON:0002204!4.14e-16!167;UBERON:0002405!3.83e-15!115;UBERON:0002193!1.34e-12!112;UBERON:0002390!2.57e-11!102;UBERON:0003061!2.57e-11!102;UBERON:0002371!3.06e-11!80;UBERON:0001474!1.02e-09!86;UBERON:0000486!1.54e-09!82;UBERON:0004765!2.57e-09!101;UBERON:0001434!2.57e-09!101;UBERON:0005256!9.35e-09!143;UBERON:0004290!1.06e-08!70;UBERON:0004535!1.14e-08!110;UBERON:0001009!3.83e-08!113;UBERON:0000914!7.41e-08!83;UBERON:0002329!7.41e-08!83;UBERON:0003077!7.41e-08!83;UBERON:0003059!7.41e-08!83;UBERON:0007282!7.41e-08!83;UBERON:0009618!7.41e-08!83;UBERON:0007285!7.41e-08!83;UBERON:0002384!7.47e-08!375;UBERON:0003914!7.88e-08!118;UBERON:0001134!5.50e-07!61;UBERON:0002036!5.50e-07!61;UBERON:0003082!5.50e-07!61;UBERON:0002385!7.93e-07!63;UBERON:0001015!7.93e-07!63;UBERON:0000383!7.93e-07!63;UBERON:0000490!9.01e-07!138;UBERON:0000468!9.44e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.25e-21,315;UBERON:0004120,6.25e-21,315;UBERON:0006603,6.25e-21,315;UBERON:0002204,1.49e-18,167;UBERON:0003081,3.50e-18,203;UBERON:0002193,3.67e-13,108;UBERON:0002371,4.22e-13,76;UBERON:0002390,4.61e-12,98;UBERON:0003061,4.61e-12,98;UBERON:0004765,5.60e-12,90;UBERON:0002405,5.90e-12,93;UBERON:0001434,7.68e-12,100;UBERON:0001474,2.67e-11,82;UBERON:0007503,9.86e-10,78;UBERON:0003104,1.71e-09,160;UBERON:0009142,1.71e-09,160;UBERON:0005256,2.06e-09,122;UBERON:0000486,3.93e-09,83;UBERON:0007524,1.28e-08,73;UBERON:0002329,1.47e-08,71;UBERON:0003059,1.47e-08,71;UBERON:0007282,1.47e-08,71;UBERON:0004290,1.47e-08,71;UBERON:0009618,1.47e-08,71;UBERON:0003077,3.49e-08,72;UBERON:0007285,3.49e-08,72;UBERON:0002384,4.12e-08,371;UBERON:0000490,1.44e-07,148;UBERON:0004535,1.79e-07,109;UBERON:0000923,3.41e-07,560;UBERON:0010316,3.41e-07,560;UBERON:0005291,3.41e-07,560;UBERON:0006598,3.41e-07,560;UBERON:0010317,3.41e-07,560;UBERON:0002532,3.41e-07,560;UBERON:0001009,5.13e-07,112;UBERON:0003914,5.73e-07,117;UBERON:0001134,5.77e-07,62;UBERON:0002036,5.77e-07,62;UBERON:0003082,5.77e-07,62;UBERON:0002050,8.47e-07,564;UBERON:0002385,9.94e-07,64;UBERON:0001015,9.94e-07,64;UBERON:0000383,9.94e-07,64 | |||
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| ||
|short_description=p1@BC007552 | |||
}} | }} |
Latest revision as of 15:57, 27 July 2015
Short description: | p1@BC007552 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC007552_5end |
Coexpression cluster: | C467_CD14_Monocytederived_Mesenchymal_Macrophage_Dendritic_mucinous_liver |
Association with transcript: | 180bp_to_BC007552_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.56e-17 | 59 |
monocyte | 1.56e-17 | 59 |
monoblast | 1.56e-17 | 59 |
promonocyte | 1.56e-17 | 59 |
defensive cell | 1.02e-16 | 48 |
phagocyte | 1.02e-16 | 48 |
macrophage dendritic cell progenitor | 3.76e-16 | 61 |
multi fate stem cell | 2.64e-14 | 427 |
myeloid lineage restricted progenitor cell | 3.47e-14 | 66 |
somatic stem cell | 8.80e-14 | 433 |
stem cell | 3.17e-13 | 441 |
classical monocyte | 9.62e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.62e-13 | 42 |
granulocyte monocyte progenitor cell | 1.29e-12 | 67 |
myeloid leukocyte | 5.06e-12 | 72 |
mesodermal cell | 7.63e-12 | 121 |
connective tissue cell | 8.52e-09 | 361 |
muscle precursor cell | 7.33e-08 | 58 |
myoblast | 7.33e-08 | 58 |
multi-potent skeletal muscle stem cell | 7.33e-08 | 58 |
muscle cell | 1.15e-07 | 55 |
smooth muscle cell | 1.53e-07 | 43 |
smooth muscle myoblast | 1.53e-07 | 43 |
mesenchymal cell | 3.68e-07 | 354 |