FFCP PHASE1:Hg19::chr19:6062269..6062283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6062269..6062283,- | |||
|coexpression_cluster_id=C677 | |||
|description=CAGE_peak_at_chr19:6062269..6062283,- | |description=CAGE_peak_at_chr19:6062269..6062283,- | ||
|id=chr19:6062269..6062283,- | |id=chr19:6062269..6062283,- | ||
|ontology_enrichment_celltype=CL:0002057!9.01e-65!42;CL:0000860!1.06e-59!45;CL:0000766!3.21e-56!76;CL:0000738!2.76e-55!140;CL:0000557!3.53e-55!71;CL:0002009!2.63e-52!65;CL:0000839!2.45e-50!70;CL:0002194!2.33e-48!63;CL:0000576!2.33e-48!63;CL:0000040!2.33e-48!63;CL:0000559!2.33e-48!63;CL:0000763!3.94e-47!112;CL:0000049!3.94e-47!112;CL:0000037!6.07e-45!172;CL:0000566!6.07e-45!172;CL:0000988!1.62e-41!182;CL:0002031!7.83e-41!124;CL:0002032!2.23e-40!165;CL:0000837!2.23e-40!165;CL:0002087!3.40e-39!119;CL:0000134!3.92e-17!358;CL:0002320!1.85e-16!365;CL:0002393!9.37e-16!9;CL:0002397!9.37e-16!9;CL:0000451!2.89e-15!10;CL:0000990!6.86e-15!8;CL:0000219!4.32e-14!390;CL:0000034!2.52e-12!444;CL:0000453!1.15e-11!5;CL:0000048!2.80e-11!430;CL:0000723!6.97e-11!436;CL:0000840!1.70e-09!5;CL:0001029!1.70e-09!5;CL:0000767!2.54e-08!3;CL:0000842!2.61e-08!3;CL:0000623!1.25e-07!3;CL:0000825!1.25e-07!3;CL:0000063!4.98e-07!578 | |ontology_enrichment_celltype=CL:0002057!9.01e-65!42;CL:0000860!1.06e-59!45;CL:0000766!3.21e-56!76;CL:0000738!2.76e-55!140;CL:0000557!3.53e-55!71;CL:0002009!2.63e-52!65;CL:0000839!2.45e-50!70;CL:0002194!2.33e-48!63;CL:0000576!2.33e-48!63;CL:0000040!2.33e-48!63;CL:0000559!2.33e-48!63;CL:0000763!3.94e-47!112;CL:0000049!3.94e-47!112;CL:0000037!6.07e-45!172;CL:0000566!6.07e-45!172;CL:0000988!1.62e-41!182;CL:0002031!7.83e-41!124;CL:0002032!2.23e-40!165;CL:0000837!2.23e-40!165;CL:0002087!3.40e-39!119;CL:0000134!3.92e-17!358;CL:0002320!1.85e-16!365;CL:0002393!9.37e-16!9;CL:0002397!9.37e-16!9;CL:0000451!2.89e-15!10;CL:0000990!6.86e-15!8;CL:0000219!4.32e-14!390;CL:0000034!2.52e-12!444;CL:0000453!1.15e-11!5;CL:0000048!2.80e-11!430;CL:0000723!6.97e-11!436;CL:0000840!1.70e-09!5;CL:0001029!1.70e-09!5;CL:0000767!2.54e-08!3;CL:0000842!2.61e-08!3;CL:0000623!1.25e-07!3;CL:0000825!1.25e-07!3;CL:0000063!4.98e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.31e-29;33!CL:0002057;3.31e-29;33!CL:0000766;8.81e-22;69!CL:0000576;1.56e-20;48!CL:0000473;6.56e-20;39!CL:0000234;6.56e-20;39!CL:0001014;1.28e-14;2!CL:0001016;1.28e-14;2!CL:0002393;9.96e-11;6!CL:0002397;9.96e-11;6!CL:0000767;1.79e-10;3!CL:0000226;3.49e-10;3!CL:0000842;3.49e-10;3!CL:0000094;2.56e-08;8!CL:0000738;3.75e-08;136!CL:0000763;4.74e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.25e-37,42;CL:0002057,1.25e-37,42;CL:0000766,1.36e-36,72;CL:0000557,1.78e-35,67;CL:0000473,1.55e-32,48;CL:0000234,1.55e-32,48;CL:0002009,2.06e-31,61;CL:0000839,8.08e-29,66;CL:0000738,1.43e-28,136;CL:0000763,2.55e-28,108;CL:0000049,2.55e-28,108;CL:0002194,2.14e-25,59;CL:0000576,2.14e-25,59;CL:0000040,2.14e-25,59;CL:0000559,2.14e-25,59;CL:0000037,2.85e-22,168;CL:0000988,6.60e-21,177;CL:0002031,3.23e-18,120;CL:0002032,1.29e-17,161;CL:0000837,1.29e-17,161;CL:0002087,3.55e-15,115;CL:0001014,1.93e-14,2;CL:0001016,1.93e-14,2;CL:0000767,1.75e-10,3;CL:0000226,3.65e-10,3;CL:0000842,3.65e-10,3;CL:0000134,5.54e-09,354;CL:0002320,1.04e-08,361;CL:0000094,2.23e-08,8;CL:0000034,8.34e-08,441;CL:0000219,9.39e-08,386;CL:0002393,3.01e-07,9;CL:0002397,3.01e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.04e-30;42!CL:0000049;5.89e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-47!80;UBERON:0002390!1.45e-44!102;UBERON:0003061!1.45e-44!102;UBERON:0001474!2.37e-43!86;UBERON:0002193!2.44e-39!112;UBERON:0004765!4.98e-35!101;UBERON:0001434!4.98e-35!101;UBERON:0002405!1.10e-30!115;UBERON:0003081!2.34e-17!216;UBERON:0002204!2.70e-16!167;UBERON:0002384!2.96e-16!375 | |ontology_enrichment_uberon=UBERON:0002371!1.49e-47!80;UBERON:0002390!1.45e-44!102;UBERON:0003061!1.45e-44!102;UBERON:0001474!2.37e-43!86;UBERON:0002193!2.44e-39!112;UBERON:0004765!4.98e-35!101;UBERON:0001434!4.98e-35!101;UBERON:0002405!1.10e-30!115;UBERON:0003081!2.34e-17!216;UBERON:0002204!2.70e-16!167;UBERON:0002384!2.96e-16!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.11e-31,76;UBERON:0002390,1.30e-28,98;UBERON:0003061,1.30e-28,98;UBERON:0001474,2.33e-28,82;UBERON:0002193,1.34e-25,108;UBERON:0004765,1.60e-25,90;UBERON:0002405,1.39e-24,93;UBERON:0001434,1.32e-22,100;UBERON:0003081,5.17e-13,203;UBERON:0002204,5.17e-12,167;UBERON:0002384,2.43e-08,371;UBERON:0000926,1.13e-07,315;UBERON:0004120,1.13e-07,315;UBERON:0006603,1.13e-07,315 | |||
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| ||
|short_description=p@chr19:6062269..6062283,- | |short_description=p@chr19:6062269..6062283,- | ||
}} | }} |
Latest revision as of 18:01, 27 July 2015
Short description: | p@chr19:6062269..6062283, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6062269..6062283, - |
Coexpression cluster: | C677_Basophils_CD14_Eosinophils_Neutrophils_CD34_Peripheral_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.11e-31 | 76 |
hematopoietic system | 1.30e-28 | 98 |
blood island | 1.30e-28 | 98 |
bone element | 2.33e-28 | 82 |
hemolymphoid system | 1.34e-25 | 108 |
skeletal element | 1.60e-25 | 90 |
immune system | 1.39e-24 | 93 |
skeletal system | 1.32e-22 | 100 |
lateral plate mesoderm | 5.17e-13 | 203 |
musculoskeletal system | 5.17e-12 | 167 |
connective tissue | 2.43e-08 | 371 |
mesoderm | 1.13e-07 | 315 |
mesoderm-derived structure | 1.13e-07 | 315 |
presumptive mesoderm | 1.13e-07 | 315 |