FFCP PHASE1:Hg19::chr1:12679075..12679086,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:12679075..12679086,- | |||
|coexpression_cluster_id=C3854 | |coexpression_cluster_id=C3854 | ||
|description=CAGE_peak_at_chr1:12679075..12679086,- | |description=CAGE_peak_at_chr1:12679075..12679086,- | ||
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|ontology_enrichment_celltype=CL:0000359!1.91e-09!32;CL:0000183!5.32e-09!59;CL:0000187!1.60e-08!54;CL:0000222!2.27e-08!119;CL:0000680!5.23e-08!57;CL:0000056!5.23e-08!57;CL:0000355!5.23e-08!57;CL:0000192!3.65e-07!42;CL:0000514!3.65e-07!42 | |ontology_enrichment_celltype=CL:0000359!1.91e-09!32;CL:0000183!5.32e-09!59;CL:0000187!1.60e-08!54;CL:0000222!2.27e-08!119;CL:0000680!5.23e-08!57;CL:0000056!5.23e-08!57;CL:0000355!5.23e-08!57;CL:0000192!3.65e-07!42;CL:0000514!3.65e-07!42 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000359,1.23e-15,32;CL:0000222,1.25e-14,121;CL:0002321,4.05e-11,250;CL:0000187,5.14e-11,55;CL:0000192,6.85e-11,43;CL:0000514,6.85e-11,43;CL:0000680,2.87e-10,58;CL:0000056,2.87e-10,58;CL:0000355,2.87e-10,58;CL:0000393,1.35e-09,61;CL:0000211,1.35e-09,61;CL:0002594,1.31e-08,4;CL:0000077,1.45e-08,19;CL:0002593,4.93e-08,2;CL:1000449,6.23e-08,15;CL:0002589,8.35e-08,2;CL:0002595,4.73e-07,5;CL:1000497,6.41e-07,17;CL:0002518,6.41e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;5.66e-08;43 | |ontology_enrichment_development_v019=CL:0000514;5.66e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr1:12679075..12679086,- | |short_description=p@chr1:12679075..12679086,- | ||
}} | }} |
Latest revision as of 20:31, 27 July 2015
Short description: | p@chr1:12679075..12679086, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12679075..12679086, - |
Coexpression cluster: | C3854_anaplastic_Cardiac_Mesothelial_mesothelioma_mesenchymal_Smooth_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.23e-15 | 32 |
mesodermal cell | 1.25e-14 | 121 |
embryonic cell | 4.05e-11 | 250 |
muscle cell | 5.14e-11 | 55 |
smooth muscle cell | 6.85e-11 | 43 |
smooth muscle myoblast | 6.85e-11 | 43 |
muscle precursor cell | 2.87e-10 | 58 |
myoblast | 2.87e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.87e-10 | 58 |
electrically responsive cell | 1.35e-09 | 61 |
electrically active cell | 1.35e-09 | 61 |
smooth muscle cell of the umbilical artery | 1.31e-08 | 4 |
mesothelial cell | 1.45e-08 | 19 |
smooth muscle cell of the internal thoracic artery | 4.93e-08 | 2 |
epithelial cell of nephron | 6.23e-08 | 15 |
smooth muscle cell of the brachiocephalic vasculature | 8.35e-08 | 2 |
smooth muscle cell of the subclavian artery | 4.73e-07 | 5 |
kidney cell | 6.41e-07 | 17 |
kidney epithelial cell | 6.41e-07 | 17 |