FFCP PHASE1:Hg19::chr1:153650470..153650481,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:153650470..153650481,+ | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr1:153650470..153650481,+ | |description=CAGE_peak_at_chr1:153650470..153650481,+ | ||
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|ontology_enrichment_celltype=CL:0000990!6.83e-24!8;CL:0000451!1.84e-19!10;CL:0000453!1.25e-11!5;CL:0000840!1.11e-09!5;CL:0001029!1.11e-09!5 | |ontology_enrichment_celltype=CL:0000990!6.83e-24!8;CL:0000451!1.84e-19!10;CL:0000453!1.25e-11!5;CL:0000840!1.11e-09!5;CL:0001029!1.11e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002262;5.96e-34;2!CL:1000398;5.96e-34;2!CL:0000453;1.71e-14;5!CL:0000138;2.19e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9!CL:0000990;1.16e-08;8!CL:0000451;2.55e-07;10!CL:0000182;8.14e-07;12 | |ontology_enrichment_celltype_v019=CL:0002262;5.96e-34;2!CL:1000398;5.96e-34;2!CL:0000453;1.71e-14;5!CL:0000138;2.19e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9!CL:0000990;1.16e-08;8!CL:0000451;2.55e-07;10!CL:0000182;8.14e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002262,5.04e-34,2;CL:1000398,5.04e-34,2;CL:0000453,1.83e-14,5;CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9;CL:0000990,1.21e-08,8;CL:0000451,2.63e-07,10;CL:0000182,7.92e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3371!6.59e-08!1;DOID:4549!6.59e-08!1;DOID:5861!6.59e-08!1;DOID:6496!6.59e-08!1 | |ontology_enrichment_disease=DOID:3371!6.59e-08!1;DOID:4549!6.59e-08!1;DOID:5861!6.59e-08!1;DOID:6496!6.59e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0000341!2.81e-13!2;UBERON:0002146!1.03e-07!1;UBERON:0005623!1.03e-07!1;UBERON:0006834!3.62e-07!1;UBERON:0002372!4.90e-07!1;UBERON:0001961!4.90e-07!1;UBERON:0001744!4.90e-07!1;UBERON:0001735!4.90e-07!1;UBERON:0000995!5.09e-07!21 | |ontology_enrichment_uberon=UBERON:0000341!2.81e-13!2;UBERON:0002146!1.03e-07!1;UBERON:0005623!1.03e-07!1;UBERON:0006834!3.62e-07!1;UBERON:0002372!4.90e-07!1;UBERON:0001961!4.90e-07!1;UBERON:0001744!4.90e-07!1;UBERON:0001735!4.90e-07!1;UBERON:0000995!5.09e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.96e-34;2!UBERON:0003497;5.96e-34;2!UBERON:0003909;5.96e-34;2!UBERON:0003835;5.96e-34;2!UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0001280;3.66e-23;3!UBERON:0004647;3.66e-23;3!UBERON:0003513;9.43e-11;7 | |ontology_enrichment_uberon_v019=UBERON:0001281;5.96e-34;2!UBERON:0003497;5.96e-34;2!UBERON:0003909;5.96e-34;2!UBERON:0003835;5.96e-34;2!UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0001280;3.66e-23;3!UBERON:0004647;3.66e-23;3!UBERON:0003513;9.43e-11;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,5.04e-34,2;UBERON:0003497,5.04e-34,2;UBERON:0003909,5.04e-34,2;UBERON:0003835,5.04e-34,2;UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0001280,3.27e-23,3;UBERON:0004647,3.27e-23,3;UBERON:0005171,3.27e-23,3;UBERON:0002394,2.45e-12,6;UBERON:0003928,2.45e-12,6;UBERON:0003513,8.99e-11,7;UBERON:0002294,1.12e-08,9;UBERON:0001173,1.12e-08,9;UBERON:0004912,1.12e-08,9 | |||
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|short_description=p@chr1:153650470..153650481,+ | |short_description=p@chr1:153650470..153650481,+ | ||
}} | }} |
Latest revision as of 21:50, 27 July 2015
Short description: | p@chr1:153650470..153650481, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153650470..153650481, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 5.04e-34 | 2 |
endothelial cell of hepatic sinusoid | 5.04e-34 | 2 |
Langerhans cell | 1.83e-14 | 5 |
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
conventional dendritic cell | 1.21e-08 | 8 |
dendritic cell | 2.63e-07 | 10 |
hepatocyte | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 5.04e-34 | 2 |
abdomen blood vessel | 5.04e-34 | 2 |
sinusoid | 5.04e-34 | 2 |
abdominal segment blood vessel | 5.04e-34 | 2 |
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
liver parenchyma | 3.27e-23 | 3 |
liver lobule | 3.27e-23 | 3 |
hepatic duct | 3.27e-23 | 3 |
bile duct | 2.45e-12 | 6 |
digestive system duct | 2.45e-12 | 6 |
trunk blood vessel | 8.99e-11 | 7 |
biliary system | 1.12e-08 | 9 |
biliary tree | 1.12e-08 | 9 |
biliary bud | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |