FFCP PHASE1:Hg19::chr1:224862010..224862011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:224862010..224862011,+ | |||
|description=CAGE_peak_at_chr1:224862010..224862011,+ | |description=CAGE_peak_at_chr1:224862010..224862011,+ | ||
|id=chr1:224862010..224862011,+ | |id=chr1:224862010..224862011,+ | ||
|ontology_enrichment_celltype=CL:0002551;2.39e-17;6!CL:0000840;4.18e-10;5!CL:0002620;2.01e-09;23!CL:1000306;3.82e-07;4!CL:0002547;3.82e-07;4!CL:0000990;6.97e-07;8 | |ontology_enrichment_celltype=CL:0002551!2.04e-08!6;CL:0000057!9.97e-07!75 | ||
| | |ontology_enrichment_celltype_v019=CL:0002551;2.39e-17;6!CL:0000840;4.18e-10;5!CL:0002620;2.01e-09;23!CL:1000306;3.82e-07;4!CL:0002547;3.82e-07;4!CL:0000990;6.97e-07;8 | ||
|ontology_enrichment_disease=DOID:2394;4.04e-11;14!DOID:5662;1.48e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0002551,2.31e-17,6;CL:0000840,4.47e-10,5;CL:0001029,4.47e-10,5;CL:0002620,2.02e-09,23;CL:0000057,4.28e-08,76;CL:1000306,2.63e-07,4;CL:0002547,2.63e-07,4;CL:0000990,7.28e-07,8 | ||
|ontology_enrichment_uberon=UBERON:0002067;1.28e-11;9!UBERON:0000992;5.55e-08;13!UBERON:0000941;1.48e-07;1!UBERON:0001785;1.48e-07;1!UBERON:0002464;1.48e-07;1!UBERON:0004904;1.48e-07;1!UBERON:0001021;1.48e-07;1!UBERON:0004797;3.82e-07;4!UBERON:0000415;3.82e-07;4!UBERON:0007240;3.82e-07;4!UBERON:0005742;3.82e-07;4!UBERON:0005734;3.82e-07;4!UBERON:0004664;3.82e-07;4!UBERON:0002119;3.82e-07;4!UBERON:0004663;3.82e-07;4 | |ontology_enrichment_development_v019=UBERON:0005425;1.48e-07;1 | ||
|ontology_enrichment_disease=DOID:2394!6.29e-10!14;DOID:193!2.62e-07!29;DOID:120!3.76e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.04e-11;14!DOID:5662;1.48e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.19e-11,14;DOID:5662,2.98e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.73e-11!34;UBERON:0002791!9.37e-11!33;UBERON:0000955!1.41e-10!69;UBERON:0006238!1.41e-10!69;UBERON:0001869!1.85e-10!32;UBERON:0001017!4.94e-10!82;UBERON:0000956!8.60e-10!25;UBERON:0000203!8.60e-10!25;UBERON:0000073!1.51e-09!94;UBERON:0001016!1.51e-09!94;UBERON:0002020!2.31e-09!34;UBERON:0003528!2.31e-09!34;UBERON:0005743!4.29e-09!86;UBERON:0002619!6.59e-09!22;UBERON:0001950!1.22e-08!20;UBERON:0002780!1.80e-08!41;UBERON:0001890!1.80e-08!41;UBERON:0006240!1.80e-08!41;UBERON:0001049!3.49e-08!57;UBERON:0005068!3.49e-08!57;UBERON:0006241!3.49e-08!57;UBERON:0007135!3.49e-08!57;UBERON:0003080!3.97e-08!42;UBERON:0002616!1.16e-07!59;UBERON:0000992!5.11e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.28e-11;9!UBERON:0000992;5.55e-08;13!UBERON:0000941;1.48e-07;1!UBERON:0001785;1.48e-07;1!UBERON:0002464;1.48e-07;1!UBERON:0004904;1.48e-07;1!UBERON:0001021;1.48e-07;1!UBERON:0004797;3.82e-07;4!UBERON:0000415;3.82e-07;4!UBERON:0007240;3.82e-07;4!UBERON:0005742;3.82e-07;4!UBERON:0005734;3.82e-07;4!UBERON:0004664;3.82e-07;4!UBERON:0002119;3.82e-07;4!UBERON:0004663;3.82e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.25e-11,9;UBERON:0004016,1.25e-11,9;UBERON:0010083,1.25e-11,9;UBERON:0000992,6.52e-08,13;UBERON:0000941,1.15e-07,1;UBERON:0001785,1.15e-07,1;UBERON:0002464,1.15e-07,1;UBERON:0004904,1.15e-07,1;UBERON:0001021,1.15e-07,1;UBERON:0003902,1.15e-07,1;UBERON:0005425,1.15e-07,1;UBERON:0000415,2.63e-07,4;UBERON:0007240,2.63e-07,4;UBERON:0005742,2.63e-07,4;UBERON:0005734,2.63e-07,4;UBERON:0004664,2.63e-07,4;UBERON:0004663,2.63e-07,4;UBERON:0002119,4.34e-07,4 | |||
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| ||
|short_description=p@chr1:224862010..224862011,+ | |short_description=p@chr1:224862010..224862011,+ | ||
}} | }} |
Latest revision as of 04:27, 28 July 2015
Short description: | p@chr1:224862010..224862011, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:224862010..224862011, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 2.31e-17 | 6 |
immature conventional dendritic cell | 4.47e-10 | 5 |
common dendritic progenitor | 4.47e-10 | 5 |
skin fibroblast | 2.02e-09 | 23 |
fibroblast | 4.28e-08 | 76 |
fibroblast of tunica adventitia of artery | 2.63e-07 | 4 |
fibroblast of the aortic adventitia | 2.63e-07 | 4 |
conventional dendritic cell | 7.28e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
dermis | 1.25e-11 | 9 |
dermatome | 1.25e-11 | 9 |
future dermis | 1.25e-11 | 9 |
female gonad | 6.52e-08 | 13 |
cranial nerve II | 1.15e-07 | 1 |
cranial nerve | 1.15e-07 | 1 |
nerve trunk | 1.15e-07 | 1 |
nerve connecting eye with brain | 1.15e-07 | 1 |
nerve | 1.15e-07 | 1 |
retinal neural layer | 1.15e-07 | 1 |
presumptive neural retina | 1.15e-07 | 1 |
artery wall | 2.63e-07 | 4 |
tunica adventitia of artery | 2.63e-07 | 4 |
adventitia | 2.63e-07 | 4 |
tunica adventitia of blood vessel | 2.63e-07 | 4 |
aorta tunica adventitia | 2.63e-07 | 4 |
aorta wall | 2.63e-07 | 4 |
left ovary | 4.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.19e-11 | 14 |
pleomorphic carcinoma | 2.98e-07 | 1 |