FFCP PHASE1:Hg19::chr1:224862010..224862011,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:224862010..224862011,+ | |||
|description=CAGE_peak_at_chr1:224862010..224862011,+ | |description=CAGE_peak_at_chr1:224862010..224862011,+ | ||
|id=chr1:224862010..224862011,+ | |id=chr1:224862010..224862011,+ | ||
|ontology_enrichment_celltype=CL:0002551!2.04e-08!6;CL:0000057!9.97e-07!75 | |ontology_enrichment_celltype=CL:0002551!2.04e-08!6;CL:0000057!9.97e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002551;2.39e-17;6!CL:0000840;4.18e-10;5!CL:0002620;2.01e-09;23!CL:1000306;3.82e-07;4!CL:0002547;3.82e-07;4!CL:0000990;6.97e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,2.31e-17,6;CL:0000840,4.47e-10,5;CL:0001029,4.47e-10,5;CL:0002620,2.02e-09,23;CL:0000057,4.28e-08,76;CL:1000306,2.63e-07,4;CL:0002547,2.63e-07,4;CL:0000990,7.28e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.48e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!6.29e-10!14;DOID:193!2.62e-07!29;DOID:120!3.76e-07!27 | |ontology_enrichment_disease=DOID:2394!6.29e-10!14;DOID:193!2.62e-07!29;DOID:120!3.76e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.04e-11;14!DOID:5662;1.48e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.19e-11,14;DOID:5662,2.98e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.73e-11!34;UBERON:0002791!9.37e-11!33;UBERON:0000955!1.41e-10!69;UBERON:0006238!1.41e-10!69;UBERON:0001869!1.85e-10!32;UBERON:0001017!4.94e-10!82;UBERON:0000956!8.60e-10!25;UBERON:0000203!8.60e-10!25;UBERON:0000073!1.51e-09!94;UBERON:0001016!1.51e-09!94;UBERON:0002020!2.31e-09!34;UBERON:0003528!2.31e-09!34;UBERON:0005743!4.29e-09!86;UBERON:0002619!6.59e-09!22;UBERON:0001950!1.22e-08!20;UBERON:0002780!1.80e-08!41;UBERON:0001890!1.80e-08!41;UBERON:0006240!1.80e-08!41;UBERON:0001049!3.49e-08!57;UBERON:0005068!3.49e-08!57;UBERON:0006241!3.49e-08!57;UBERON:0007135!3.49e-08!57;UBERON:0003080!3.97e-08!42;UBERON:0002616!1.16e-07!59;UBERON:0000992!5.11e-07!13 | |ontology_enrichment_uberon=UBERON:0001893!1.73e-11!34;UBERON:0002791!9.37e-11!33;UBERON:0000955!1.41e-10!69;UBERON:0006238!1.41e-10!69;UBERON:0001869!1.85e-10!32;UBERON:0001017!4.94e-10!82;UBERON:0000956!8.60e-10!25;UBERON:0000203!8.60e-10!25;UBERON:0000073!1.51e-09!94;UBERON:0001016!1.51e-09!94;UBERON:0002020!2.31e-09!34;UBERON:0003528!2.31e-09!34;UBERON:0005743!4.29e-09!86;UBERON:0002619!6.59e-09!22;UBERON:0001950!1.22e-08!20;UBERON:0002780!1.80e-08!41;UBERON:0001890!1.80e-08!41;UBERON:0006240!1.80e-08!41;UBERON:0001049!3.49e-08!57;UBERON:0005068!3.49e-08!57;UBERON:0006241!3.49e-08!57;UBERON:0007135!3.49e-08!57;UBERON:0003080!3.97e-08!42;UBERON:0002616!1.16e-07!59;UBERON:0000992!5.11e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.28e-11;9!UBERON:0000992;5.55e-08;13!UBERON:0000941;1.48e-07;1!UBERON:0001785;1.48e-07;1!UBERON:0002464;1.48e-07;1!UBERON:0004904;1.48e-07;1!UBERON:0001021;1.48e-07;1!UBERON:0004797;3.82e-07;4!UBERON:0000415;3.82e-07;4!UBERON:0007240;3.82e-07;4!UBERON:0005742;3.82e-07;4!UBERON:0005734;3.82e-07;4!UBERON:0004664;3.82e-07;4!UBERON:0002119;3.82e-07;4!UBERON:0004663;3.82e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.25e-11,9;UBERON:0004016,1.25e-11,9;UBERON:0010083,1.25e-11,9;UBERON:0000992,6.52e-08,13;UBERON:0000941,1.15e-07,1;UBERON:0001785,1.15e-07,1;UBERON:0002464,1.15e-07,1;UBERON:0004904,1.15e-07,1;UBERON:0001021,1.15e-07,1;UBERON:0003902,1.15e-07,1;UBERON:0005425,1.15e-07,1;UBERON:0000415,2.63e-07,4;UBERON:0007240,2.63e-07,4;UBERON:0005742,2.63e-07,4;UBERON:0005734,2.63e-07,4;UBERON:0004664,2.63e-07,4;UBERON:0004663,2.63e-07,4;UBERON:0002119,4.34e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.958120975510189,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,1.62273696827342,2.08955684759121,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32409180813219,1.72101972449288,0.354668382198357,1.12135520028461,0,0,0,0,0.326923806226917,0,0,0,0.936480230490962,1.1409436430889,0.149448680551801,2.23125547423153,1.45685649931318,2.24721290723598,0.204154171254893,3.31652656741774,0,0,0,0,0,1.68336113954066,0.625592599359821,0,0,0,0.150238058906597,0.113432183160021,0,0,0,1.50045548042201,0,0,0,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0,1.06502877754984,0.201504196455281,0,0,0,0,0.121973706129595,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.246217006087397,1.17002132569619,0.891786973732369,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.576479813667846,0.50496973370552,0,0.381988425558278,0,0,0,0.300343057843917,0,0.224262168690721,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0.355123450626254,0.657017248110473,0.519254429183621,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0.890469640183247,0.16480387422676,0,0,0,0.251932747854276,2.86352311006033,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0.874813840149763,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,1.69946265673865,0,1.20990716048664,0,0,0.450970258243478,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0,0.189932387867636,0,0.400794101257669,0,0,0,0,0.514784993585894,0,0.124252535565433,0,0.543616824294456,1.04602846312333,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.681017030557878,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.250381861413,0,0.110929051536852,0.18628920882415,0,0.124980407962107,0.303298235083296,0.856396000634902,0.705797459094515,0,0,0,0.934853239388898,0,0.189403005275089,0.251567901752575,0,0,0.453692771289717,0.15543720058278,0.443565449968902,0.477890301491107,1.34940933649081,1.08684069813382,0.414706207840855,0.53168342911599,1.5652351854352,0.450772826991655,0,0,1.09109195521536,0.322231671127465,3.71227007902795,0.796191777397232,0,1.37358282073117,0.673498977531838,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,1.00828678488687,0,0.161475645631851,1.42769420259154,0,0,0,0.115525666150338,0,0,0.596748666348824,0,0.20170506870352,0.781514011233092,0,0,0,0.405225507710368,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,1.02892805662451,0.0679697329768317,0.263091094251396,0,0,0,0,0,0,0,0,0,0.47404083519818,2.32482850736251,0,0,0,0,0,0,0.946656005844523,1.19298766662821,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,1.05673990496671,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0.378499274505237,0.109265571963696,0,0.203977659483963,0,0.0918948995348449,0,0,0.803892390468535,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.958120975510189,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,1.62273696827342,2.08955684759121,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32409180813219,1.72101972449288,0.354668382198357,1.12135520028461,0,0,0,0,0.326923806226917,0,0,0,0.936480230490962,1.1409436430889,0.149448680551801,2.23125547423153,1.45685649931318,2.24721290723598,0.204154171254893,3.31652656741774,0,0,0,0,0,1.68336113954066,0.625592599359821,0,0,0,0.150238058906597,0.113432183160021,0,0,0,1.50045548042201,0,0,0,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0,1.06502877754984,0.201504196455281,0,0,0,0,0.121973706129595,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.246217006087397,1.17002132569619,0.891786973732369,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.576479813667846,0.50496973370552,0,0.381988425558278,0,0,0,0.300343057843917,0,0.224262168690721,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0.355123450626254,0.657017248110473,0.519254429183621,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0.890469640183247,0.16480387422676,0,0,0,0.251932747854276,2.86352311006033,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0.874813840149763,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,1.69946265673865,0,1.20990716048664,0,0,0.450970258243478,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0,0.189932387867636,0,0.400794101257669,0,0,0,0,0.514784993585894,0,0.124252535565433,0,0.543616824294456,1.04602846312333,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.681017030557878,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.250381861413,0,0.110929051536852,0.18628920882415,0,0.124980407962107,0.303298235083296,0.856396000634902,0.705797459094515,0,0,0,0.934853239388898,0,0.189403005275089,0.251567901752575,0,0,0.453692771289717,0.15543720058278,0.443565449968902,0.477890301491107,1.34940933649081,1.08684069813382,0.414706207840855,0.53168342911599,1.5652351854352,0.450772826991655,0,0,1.09109195521536,0.322231671127465,3.71227007902795,0.796191777397232,0,1.37358282073117,0.673498977531838,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,1.00828678488687,0,0.161475645631851,1.42769420259154,0,0,0,0.115525666150338,0,0,0.596748666348824,0,0.20170506870352,0.781514011233092,0,0,0,0.405225507710368,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,1.02892805662451,0.0679697329768317,0.263091094251396,0,0,0,0,0,0,0,0,0,0.47404083519818,2.32482850736251,0,0,0,0,0,0,0.946656005844523,1.19298766662821,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,1.05673990496671,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0.378499274505237,0.109265571963696,0,0.203977659483963,0,0.0918948995348449,0,0,0.803892390468535,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr1:224862010..224862011,+ | |short_description=p@chr1:224862010..224862011,+ | ||
}} | }} |
Latest revision as of 04:27, 28 July 2015
Short description: | p@chr1:224862010..224862011, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:224862010..224862011, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 2.31e-17 | 6 |
immature conventional dendritic cell | 4.47e-10 | 5 |
common dendritic progenitor | 4.47e-10 | 5 |
skin fibroblast | 2.02e-09 | 23 |
fibroblast | 4.28e-08 | 76 |
fibroblast of tunica adventitia of artery | 2.63e-07 | 4 |
fibroblast of the aortic adventitia | 2.63e-07 | 4 |
conventional dendritic cell | 7.28e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
dermis | 1.25e-11 | 9 |
dermatome | 1.25e-11 | 9 |
future dermis | 1.25e-11 | 9 |
female gonad | 6.52e-08 | 13 |
cranial nerve II | 1.15e-07 | 1 |
cranial nerve | 1.15e-07 | 1 |
nerve trunk | 1.15e-07 | 1 |
nerve connecting eye with brain | 1.15e-07 | 1 |
nerve | 1.15e-07 | 1 |
retinal neural layer | 1.15e-07 | 1 |
presumptive neural retina | 1.15e-07 | 1 |
artery wall | 2.63e-07 | 4 |
tunica adventitia of artery | 2.63e-07 | 4 |
adventitia | 2.63e-07 | 4 |
tunica adventitia of blood vessel | 2.63e-07 | 4 |
aorta tunica adventitia | 2.63e-07 | 4 |
aorta wall | 2.63e-07 | 4 |
left ovary | 4.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.19e-11 | 14 |
pleomorphic carcinoma | 2.98e-07 | 1 |