FFCP PHASE1:Hg19::chr1:40076753..40076758,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:40076753..40076758,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr1:40076753..40076758,- | |description=CAGE_peak_at_chr1:40076753..40076758,- | ||
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|ontology_enrichment_celltype=CL:0002150!5.35e-09!3;CL:0000861!5.35e-09!3;CL:0002127!5.22e-08!1;CL:0000914!5.22e-08!1;CL:0000911!5.22e-08!1;CL:0000814!5.22e-08!1;CL:0002042!5.22e-08!1;CL:0002039!5.22e-08!1;CL:0002040!5.22e-08!1;CL:0002041!5.22e-08!1;CL:0000946!7.26e-08!1;CL:0000786!7.26e-08!1;CL:0000980!7.26e-08!1 | |ontology_enrichment_celltype=CL:0002150!5.35e-09!3;CL:0000861!5.35e-09!3;CL:0002127!5.22e-08!1;CL:0000914!5.22e-08!1;CL:0000911!5.22e-08!1;CL:0000814!5.22e-08!1;CL:0002042!5.22e-08!1;CL:0002039!5.22e-08!1;CL:0002040!5.22e-08!1;CL:0002041!5.22e-08!1;CL:0000946!7.26e-08!1;CL:0000786!7.26e-08!1;CL:0000980!7.26e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.21e-40;1!CL:0000911;2.21e-40;1!CL:0000814;2.21e-40;1 | |ontology_enrichment_celltype_v019=CL:0002127;2.21e-40;1!CL:0000911;2.21e-40;1!CL:0000814;2.21e-40;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.21e-40,1;CL:0000914,2.21e-40,1;CL:0000911,2.21e-40,1;CL:0000814,2.21e-40,1;CL:0002042,2.21e-40,1;CL:0002039,2.21e-40,1;CL:0002040,2.21e-40,1;CL:0002041,2.21e-40,1;CL:0000893,5.70e-21,2;CL:0002489,5.70e-21,2;CL:0000809,5.70e-21,2;CL:0000808,5.70e-21,2;CL:0000894,5.70e-21,2;CL:0000806,5.70e-21,2;CL:0000807,5.70e-21,2;CL:0000805,5.70e-21,2;CL:0002425,5.70e-21,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.69e-21;2!UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |ontology_enrichment_development_v019=CL:0002425;5.69e-21;2!UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | ||
|ontology_enrichment_disease=DOID:1036!1.03e-12!8;DOID:2531!1.18e-10!51;DOID:0060083!1.18e-10!51;DOID:2355!9.44e-08!1;DOID:1240!3.76e-07!39 | |ontology_enrichment_disease=DOID:1036!1.03e-12!8;DOID:2531!1.18e-10!51;DOID:0060083!1.18e-10!51;DOID:2355!9.44e-08!1;DOID:1240!3.76e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.38e-07!4;UBERON:0005058!3.38e-07!4;UBERON:0009113!3.38e-07!4;UBERON:0003295!3.38e-07!4;UBERON:0005562!3.38e-07!4 | |ontology_enrichment_uberon=UBERON:0002370!3.38e-07!4;UBERON:0005058!3.38e-07!4;UBERON:0009113!3.38e-07!4;UBERON:0003295!3.38e-07!4;UBERON:0005562!3.38e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0002370,3.42e-11,4;UBERON:0005058,3.42e-11,4;UBERON:0009113,3.42e-11,4;UBERON:0003295,3.42e-11,4;UBERON:0005562,3.42e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003351,6.78e-08,6;UBERON:0004177,6.04e-07,7;UBERON:0005057,6.04e-07,7 | |||
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|short_description=p@chr1:40076753..40076758,- | |short_description=p@chr1:40076753..40076758,- | ||
}} | }} |
Latest revision as of 08:05, 28 July 2015
Short description: | p@chr1:40076753..40076758, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:40076753..40076758, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.21e-40 | 1 |
immature NK T cell | 2.21e-40 | 1 |
effector T cell | 2.21e-40 | 1 |
mature NK T cell | 2.21e-40 | 1 |
immature NK T cell stage IV | 2.21e-40 | 1 |
immature NK T cell stage I | 2.21e-40 | 1 |
immature NK T cell stage II | 2.21e-40 | 1 |
immature NK T cell stage III | 2.21e-40 | 1 |
thymocyte | 5.70e-21 | 2 |
double negative thymocyte | 5.70e-21 | 2 |
double-positive, alpha-beta thymocyte | 5.70e-21 | 2 |
DN4 thymocyte | 5.70e-21 | 2 |
DN1 thymic pro-T cell | 5.70e-21 | 2 |
DN2 thymocyte | 5.70e-21 | 2 |
DN3 thymocyte | 5.70e-21 | 2 |
immature single positive thymocyte | 5.70e-21 | 2 |
early T lineage precursor | 5.70e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
thymus | 3.42e-11 | 4 |
hemolymphoid system gland | 3.42e-11 | 4 |
thymic region | 3.42e-11 | 4 |
pharyngeal gland | 3.42e-11 | 4 |
thymus primordium | 3.42e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
pharyngeal epithelium | 6.78e-08 | 6 |
hemopoietic organ | 6.04e-07 | 7 |
immune organ | 6.04e-07 | 7 |