FFCP PHASE1:Hg19::chr20:33735231..33735249,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:33735231..33735249,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr20:33735231..33735249,+ | |description=CAGE_peak_at_chr20:33735231..33735249,+ | ||
|id=chr20:33735231..33735249,+ | |id=chr20:33735231..33735249,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.54e-08!182;CL:0000860!3.48e-08!45;CL:0002031!3.80e-08!124;CL:0002087!3.82e-08!119;CL:0000037!1.22e-07!172;CL:0000566!1.22e-07!172;CL:0002057!3.88e-07!42;CL:0002032!4.01e-07!165;CL:0000837!4.01e-07!165;CL:0000738!7.35e-07!140 | |ontology_enrichment_celltype=CL:0000988!2.54e-08!182;CL:0000860!3.48e-08!45;CL:0002031!3.80e-08!124;CL:0002087!3.82e-08!119;CL:0000037!1.22e-07!172;CL:0000566!1.22e-07!172;CL:0002057!3.88e-07!42;CL:0002032!4.01e-07!165;CL:0000837!4.01e-07!165;CL:0000738!7.35e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.55e-37;33!CL:0002057;2.55e-37;33!CL:0000473;2.26e-28;39!CL:0000234;2.26e-28;39!CL:0000576;9.64e-23;48!CL:0002262;3.43e-12;2!CL:1000398;3.43e-12;2!CL:0000766;2.33e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.64e-33,42;CL:0002057,2.64e-33,42;CL:0000473,3.82e-29,48;CL:0000234,3.82e-29,48;CL:0002194,2.61e-23,59;CL:0000576,2.61e-23,59;CL:0000040,2.61e-23,59;CL:0000559,2.61e-23,59;CL:0002009,1.48e-22,61;CL:0000839,7.22e-21,66;CL:0000557,1.47e-20,67;CL:0000766,3.81e-19,72;CL:0000763,9.04e-13,108;CL:0000049,9.04e-13,108;CL:0002262,3.62e-12,2;CL:1000398,3.62e-12,2;CL:0002087,5.49e-12,115;CL:0002031,1.76e-11,120;CL:0000738,4.12e-10,136;CL:0002032,1.66e-08,161;CL:0000837,1.66e-08,161;CL:0000037,3.86e-08,168;CL:0000988,1.04e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.34e-24;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.43e-12;2!UBERON:0003497;3.43e-12;2!UBERON:0003909;3.43e-12;2!UBERON:0003835;3.43e-12;2!UBERON:0001280;1.46e-08;3!UBERON:0004647;1.46e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.81e-18,76;UBERON:0001474,7.98e-17,82;UBERON:0004765,2.48e-15,90;UBERON:0002405,7.73e-15,93;UBERON:0002390,4.43e-14,98;UBERON:0003061,4.43e-14,98;UBERON:0001434,8.49e-14,100;UBERON:0002193,9.04e-13,108;UBERON:0001281,3.62e-12,2;UBERON:0003497,3.62e-12,2;UBERON:0003909,3.62e-12,2;UBERON:0003835,3.62e-12,2;UBERON:0001280,1.51e-08,3;UBERON:0004647,1.51e-08,3;UBERON:0005171,1.51e-08,3;UBERON:0003081,1.68e-08,203;UBERON:0002204,3.44e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,4.02769349251011,2.81776777182011,6.85798466676897,0,0,0,0,0,0,0,0.320929027076094,0,1.9791078011203,0.997318288108159,2.13112375266347,0,0.56738522469114,0,4.27122730936464,2.60741459210101,5.86409880703815,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0.226618685395132,0,0.34362744548263,0,0.318565414324097,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.329663433524666,0.202210631562555,0,0.0846733320657845,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0.5013797880454,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0.578742114812744,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,4.02769349251011,2.81776777182011,6.85798466676897,0,0,0,0,0,0,0,0.320929027076094,0,1.9791078011203,0.997318288108159,2.13112375266347,0,0.56738522469114,0,4.27122730936464,2.60741459210101,5.86409880703815,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0.226618685395132,0,0.34362744548263,0,0.318565414324097,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.329663433524666,0.202210631562555,0,0.0846733320657845,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0.5013797880454,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0.578742114812744,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:33735231..33735249,+ | |short_description=p@chr20:33735231..33735249,+ | ||
}} | }} |
Latest revision as of 13:20, 28 July 2015
Short description: | p@chr20:33735231..33735249, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33735231..33735249, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.64e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.64e-33 | 42 |
defensive cell | 3.82e-29 | 48 |
phagocyte | 3.82e-29 | 48 |
monopoietic cell | 2.61e-23 | 59 |
monocyte | 2.61e-23 | 59 |
monoblast | 2.61e-23 | 59 |
promonocyte | 2.61e-23 | 59 |
macrophage dendritic cell progenitor | 1.48e-22 | 61 |
myeloid lineage restricted progenitor cell | 7.22e-21 | 66 |
granulocyte monocyte progenitor cell | 1.47e-20 | 67 |
myeloid leukocyte | 3.81e-19 | 72 |
myeloid cell | 9.04e-13 | 108 |
common myeloid progenitor | 9.04e-13 | 108 |
endothelial cell of sinusoid | 3.62e-12 | 2 |
endothelial cell of hepatic sinusoid | 3.62e-12 | 2 |
nongranular leukocyte | 5.49e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.76e-11 | 120 |
leukocyte | 4.12e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.66e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-08 | 161 |
hematopoietic stem cell | 3.86e-08 | 168 |
hematopoietic cell | 1.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.81e-18 | 76 |
bone element | 7.98e-17 | 82 |
skeletal element | 2.48e-15 | 90 |
immune system | 7.73e-15 | 93 |
hematopoietic system | 4.43e-14 | 98 |
blood island | 4.43e-14 | 98 |
skeletal system | 8.49e-14 | 100 |
hemolymphoid system | 9.04e-13 | 108 |
hepatic sinusoid | 3.62e-12 | 2 |
abdomen blood vessel | 3.62e-12 | 2 |
sinusoid | 3.62e-12 | 2 |
abdominal segment blood vessel | 3.62e-12 | 2 |
liver parenchyma | 1.51e-08 | 3 |
liver lobule | 1.51e-08 | 3 |
hepatic duct | 1.51e-08 | 3 |
lateral plate mesoderm | 1.68e-08 | 203 |
musculoskeletal system | 3.44e-08 | 167 |