FFCP PHASE1:Hg19::chr2:131669765..131669776,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:131669765..131669776,+ | |||
|coexpression_cluster_id=C564 | |||
|description=CAGE_peak_at_chr2:131669765..131669776,+ | |||
|id=chr2:131669765..131669776,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.42e-32!43;CL:0002368!4.69e-24!13;CL:0000223!4.52e-22!59;CL:0000622!3.00e-20!5;CL:0002159!2.84e-18!13;CL:0000154!7.97e-17!6;CL:0002251!1.41e-13!21;CL:0002328!3.18e-13!3;CL:0002621!7.07e-13!3;CL:0002623!1.43e-12!3;CL:0000362!2.21e-12!8;CL:0002202!2.56e-11!9;CL:0002632!2.56e-11!9;CL:0000150!4.18e-11!9;CL:0000066!9.46e-11!254;CL:0000240!2.12e-10!6;CL:0000311!2.12e-10!6;CL:0000079!2.12e-10!6;CL:0000237!2.12e-10!6;CL:0000036!2.12e-10!6;CL:0000357!2.12e-10!6;CL:0000114!2.12e-10!6;CL:0000244!9.76e-10!4;CL:0000731!9.76e-10!4;CL:0000317!2.03e-09!2;CL:1000448!2.03e-09!2;CL:0002308!2.03e-09!2;CL:0002140!2.03e-09!2;CL:0002327!5.29e-09!4;CL:0000575!7.87e-09!2;CL:0000220!1.47e-08!246;CL:0002321!1.96e-08!248;CL:0002077!5.31e-08!33;CL:0000312!1.48e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000622;8.26e-40;5!CL:0002368;1.22e-38;13!CL:0002076;5.14e-36;42!CL:0000154;3.51e-33;6!CL:0002328;5.81e-25;3!CL:0002621;1.88e-24;3!CL:0002623;4.19e-24;3!CL:0000150;4.09e-22;9!CL:0002251;1.14e-18;20!CL:0000317;1.55e-17;2!CL:1000448;1.55e-17;2!CL:0002308;1.55e-17;2!CL:0002140;1.55e-17;2!CL:0002202;8.43e-15;9!CL:0002632;8.43e-15;9!CL:0000362;1.51e-14;9!CL:0002159;3.49e-14;14!CL:0002252;1.49e-09;1!CL:0000244;3.19e-09;4!CL:0000731;3.19e-09;4!CL:0000312;3.34e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.82e-46,42;CL:0000622,1.58e-39,5;CL:0002368,8.45e-39,13;CL:0000154,6.02e-33,6;CL:0000223,1.81e-32,58;CL:0002328,3.29e-25,3;CL:0002621,1.67e-24,3;CL:0002623,7.05e-24,3;CL:0000150,5.84e-22,9;CL:0002251,1.29e-18,20;CL:0000317,1.76e-17,2;CL:1000448,1.76e-17,2;CL:0002308,1.76e-17,2;CL:0002140,1.76e-17,2;CL:0002202,6.58e-15,9;CL:0002632,6.58e-15,9;CL:0000362,1.65e-14,9;CL:0002159,3.22e-14,14;CL:0000066,4.19e-13,253;CL:0002321,1.87e-10,250;CL:0002252,1.43e-09,1;CL:0000244,3.40e-09,4;CL:0000731,3.40e-09,4;CL:0000312,3.45e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.21e-17;58!UBERON:0009143;3.39e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;3.39e-09;1!DOID:3149;3.39e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.72e-09,1;DOID:3149,5.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!6.08e-17!72;UBERON:0004815!3.18e-13!3;UBERON:0002031!3.18e-13!3;UBERON:0001949!7.07e-13!3;UBERON:0003102!1.60e-11!95;UBERON:0004119!2.76e-11!169;UBERON:0000925!2.76e-11!169;UBERON:0006595!2.76e-11!169;UBERON:0000166!9.63e-11!21;UBERON:0002185!5.10e-10!4;UBERON:0007196!7.59e-10!14;UBERON:0001558!7.59e-10!14;UBERON:0000065!1.08e-09!53;UBERON:0000165!1.12e-09!28;UBERON:0000930!1.12e-09!28;UBERON:0002419!2.03e-09!2;UBERON:0007771!2.03e-09!2;UBERON:0003297!2.03e-09!2;UBERON:0001821!2.03e-09!2;UBERON:0003487!2.03e-09!2;UBERON:0001820!2.03e-09!2;UBERON:0005089!2.03e-09!2;UBERON:0005088!2.03e-09!2;UBERON:0000161!3.03e-09!35;UBERON:0001911!5.29e-09!4;UBERON:0005333!5.29e-09!4;UBERON:0008425!5.29e-09!4;UBERON:0005311!5.29e-09!4;UBERON:0005178!7.04e-08!34;UBERON:0002224!7.04e-08!34;UBERON:0000365!7.27e-08!5;UBERON:0005181!1.32e-07!35;UBERON:0001444!1.41e-07!48;UBERON:0005157!5.84e-07!51;UBERON:0001003!6.34e-07!14;UBERON:0007376!6.34e-07!14;UBERON:0007383!6.34e-07!14;UBERON:0005153!7.00e-07!37;UBERON:0002365!7.77e-07!31;UBERON:0002330!7.77e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;5.81e-25;3!UBERON:0002031;5.81e-25;3!UBERON:0001949;1.88e-24;3!UBERON:0002419;1.55e-17;2!UBERON:0007771;1.55e-17;2!UBERON:0003297;1.55e-17;2!UBERON:0001821;1.55e-17;2!UBERON:0003487;1.55e-17;2!UBERON:0001820;1.55e-17;2!UBERON:0000486;1.04e-16;12!UBERON:0002185;3.16e-15;5!UBERON:0000161;1.63e-14;19!UBERON:0000166;1.63e-14;19!UBERON:0001041;5.23e-14;14!UBERON:0004807;1.07e-12;22!UBERON:0001044;2.32e-12;6!UBERON:0003293;2.32e-12;6!UBERON:0003294;2.32e-12;6!UBERON:0010047;2.32e-12;6!UBERON:0003408;2.32e-12;6!UBERON:0000167;2.32e-12;6!UBERON:0010371;5.44e-12;31!UBERON:0005911;5.68e-12;36!UBERON:0001043;1.15e-11;3!UBERON:0000485;4.95e-11;7!UBERON:0003929;8.10e-11;7!UBERON:0000165;1.05e-09;28!UBERON:0003350;1.57e-09;8!UBERON:0001828;1.57e-09;8!UBERON:0001004;2.28e-09;65!UBERON:0007196;6.06e-09;15!UBERON:0001558;6.06e-09;15!UBERON:0001003;8.53e-09;15!UBERON:0007376;8.53e-09;15!UBERON:0005178;2.77e-08;34!UBERON:0002224;2.77e-08;34!UBERON:0000065;2.93e-08;44!UBERON:0005181;1.12e-07;35!UBERON:0000365;1.53e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.29e-25,3;UBERON:0002031,3.29e-25,3;UBERON:0001949,1.67e-24,3;UBERON:0001004,1.20e-18,74;UBERON:0002419,1.76e-17,2;UBERON:0007771,1.76e-17,2;UBERON:0003297,1.76e-17,2;UBERON:0001821,1.76e-17,2;UBERON:0003487,1.76e-17,2;UBERON:0001820,1.76e-17,2;UBERON:0005089,1.76e-17,2;UBERON:0005088,1.76e-17,2;UBERON:0002185,2.25e-15,5;UBERON:0004119,1.15e-14,160;UBERON:0000925,1.15e-14,160;UBERON:0006595,1.15e-14,160;UBERON:0000166,1.98e-12,22;UBERON:0001044,3.00e-12,6;UBERON:0003293,3.00e-12,6;UBERON:0003294,3.00e-12,6;UBERON:0010047,3.00e-12,6;UBERON:0000167,3.00e-12,6;UBERON:0001043,1.16e-11,3;UBERON:0009143,1.16e-11,3;UBERON:0003102,3.18e-11,99;UBERON:0000161,5.03e-10,36;UBERON:0004807,6.18e-10,28;UBERON:0003350,1.51e-09,8;UBERON:0001828,1.51e-09,8;UBERON:0000165,2.56e-09,29;UBERON:0000930,2.56e-09,29;UBERON:0007196,5.25e-09,15;UBERON:0001558,5.25e-09,15;UBERON:0001003,8.98e-09,15;UBERON:0007376,8.98e-09,15;UBERON:0007383,8.98e-09,15;UBERON:0000485,9.06e-09,9;UBERON:0000065,1.49e-08,54;UBERON:0005178,3.52e-08,34;UBERON:0002224,3.52e-08,34;UBERON:0005181,6.24e-08,35;UBERON:0003408,1.49e-07,10;UBERON:0000365,1.60e-07,5;UBERON:0001444,3.96e-07,49;UBERON:0001007,5.54e-07,145;UBERON:0001555,5.54e-07,145;UBERON:0007026,5.54e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,2.75826367343678,3.0120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,2.45471508531751,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,1.1240175325762,0.301586917234893,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0.447792613514241,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80709058424599,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,3.25030123018261,0,0,0,0,0,0,0,0,0,1.4875642382488,1.53752053892085,9.31572801210464,1.11273558941105,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.673554789078584,5.3624182042863,0,0.0941438007767792,2.15252686335615,3.36942951335251,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26085721434945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03608082081518,1.19502933965765,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.129177819672012,0,0,0,0,0,0,0.875576689189638,0.286888821570705,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr2:131669765..131669776,+ | |||
}} |
Latest revision as of 00:19, 29 July 2015
Short description: | p@chr2:131669765..131669776, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:131669765..131669776, + |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.82e-46 | 42 |
acinar cell | 1.58e-39 | 5 |
respiratory epithelial cell | 8.45e-39 | 13 |
protein secreting cell | 6.02e-33 | 6 |
endodermal cell | 1.81e-32 | 58 |
bronchial epithelial cell | 3.29e-25 | 3 |
gingival epithelial cell | 1.67e-24 | 3 |
acinar cell of salivary gland | 7.05e-24 | 3 |
glandular epithelial cell | 5.84e-22 | 9 |
epithelial cell of alimentary canal | 1.29e-18 | 20 |
sebum secreting cell | 1.76e-17 | 2 |
epithelial cell of sweat gland | 1.76e-17 | 2 |
epithelial cell of skin gland | 1.76e-17 | 2 |
acinar cell of sebaceous gland | 1.76e-17 | 2 |
epithelial cell of tracheobronchial tree | 6.58e-15 | 9 |
epithelial cell of lower respiratory tract | 6.58e-15 | 9 |
epidermal cell | 1.65e-14 | 9 |
general ecto-epithelial cell | 3.22e-14 | 14 |
epithelial cell | 4.19e-13 | 253 |
embryonic cell | 1.87e-10 | 250 |
epithelial cell of esophagus | 1.43e-09 | 1 |
transitional epithelial cell | 3.40e-09 | 4 |
urothelial cell | 3.40e-09 | 4 |
keratinocyte | 3.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.72e-09 | 1 |
keratoacanthoma | 5.72e-09 | 1 |