FFCP PHASE1:Hg19::chr2:133028432..133028441,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:133028432..133028441,- | |||
|coexpression_cluster_id=C2088 | |coexpression_cluster_id=C2088 | ||
|description=CAGE_peak_at_chr2:133028432..133028441,- | |description=CAGE_peak_at_chr2:133028432..133028441,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000083!2.02e-07!4 | |ontology_enrichment_celltype=CL:0000083!2.02e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.86e-23;6!CL:0000404;4.86e-23;6!CL:0000214;3.06e-12;3 | |ontology_enrichment_celltype_v019=CL:0000540;4.86e-23;6!CL:0000404;4.86e-23;6!CL:0000214;3.06e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.86e-23,6;CL:0000031,4.86e-23,6;CL:0000404,4.86e-23,6;CL:0000047,1.44e-17,8;CL:0000214,2.89e-12,3 | |||
|ontology_enrichment_development_v019=CL:0000031;4.86e-23;6!UBERON:0005062;1.12e-09;4!UBERON:0007284;1.12e-09;4 | |ontology_enrichment_development_v019=CL:0000031;4.86e-23;6!UBERON:0005062;1.12e-09;4!UBERON:0007284;1.12e-09;4 | ||
|ontology_enrichment_disease=DOID:1325!2.44e-10!7;DOID:3904!2.44e-10!7;DOID:1793!2.02e-07!4;DOID:5409!5.88e-07!4 | |ontology_enrichment_disease=DOID:1325!2.44e-10!7;DOID:3904!2.44e-10!7;DOID:1793!2.02e-07!4;DOID:5409!5.88e-07!4 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;1.84e-34;1!UBERON:0005623;1.84e-34;1!UBERON:0001000;5.05e-34;1!UBERON:0005352;5.05e-34;1!UBERON:0003978;1.85e-12;3!UBERON:0000946;1.85e-12;3!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0006915;3.06e-12;3!UBERON:0007616;3.06e-12;3!UBERON:0002217;3.06e-12;3!UBERON:0002018;3.06e-12;3!UBERON:0005904;1.44e-09;4!UBERON:0002346;1.63e-09;4!UBERON:0000923;1.63e-09;4!UBERON:0010316;1.63e-09;4!UBERON:0005291;1.63e-09;4!UBERON:0002050;7.25e-08;5!UBERON:0005423;7.25e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002146;1.84e-34;1!UBERON:0005623;1.84e-34;1!UBERON:0001000;5.05e-34;1!UBERON:0005352;5.05e-34;1!UBERON:0003978;1.85e-12;3!UBERON:0000946;1.85e-12;3!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0006915;3.06e-12;3!UBERON:0007616;3.06e-12;3!UBERON:0002217;3.06e-12;3!UBERON:0002018;3.06e-12;3!UBERON:0005904;1.44e-09;4!UBERON:0002346;1.63e-09;4!UBERON:0000923;1.63e-09;4!UBERON:0010316;1.63e-09;4!UBERON:0005291;1.63e-09;4!UBERON:0002050;7.25e-08;5!UBERON:0005423;7.25e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,1.84e-34,1;UBERON:0005623,1.84e-34,1;UBERON:0001000,5.05e-34,1;UBERON:0005352,5.05e-34,1;UBERON:0003978,1.85e-12,3;UBERON:0009751,1.85e-12,3;UBERON:0000946,1.85e-12,3;UBERON:0002523,1.85e-12,3;UBERON:0005983,1.85e-12,3;UBERON:0002165,1.85e-12,3;UBERON:0002062,1.85e-12,3;UBERON:0007280,1.85e-12,3;UBERON:0006947,2.59e-12,3;UBERON:0004054,2.59e-12,3;UBERON:0006915,2.89e-12,3;UBERON:0007616,2.89e-12,3;UBERON:0002217,2.89e-12,3;UBERON:0002018,2.89e-12,3;UBERON:0005904,1.44e-09,4 | |||
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| ||
|short_description=p@chr2:133028432..133028441,- | |short_description=p@chr2:133028432..133028441,- | ||
}} | }} |
Latest revision as of 00:24, 29 July 2015
Short description: | p@chr2:133028432..133028441, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:133028432..133028441, - |
Coexpression cluster: | C2088_heart_Neurons_Synoviocyte_Saos2_neuroectodermal_penis_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.86e-23 | 6 |
neuroblast | 4.86e-23 | 6 |
electrically signaling cell | 4.86e-23 | 6 |
neuronal stem cell | 1.44e-17 | 8 |
synovial cell | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 1.84e-34 | 1 |
semi-lunar valve | 1.84e-34 | 1 |
vas deferens | 5.05e-34 | 1 |
spermatic cord | 5.05e-34 | 1 |
valve | 1.85e-12 | 3 |
cardiac mesenchyme | 1.85e-12 | 3 |
cardial valve | 1.85e-12 | 3 |
tunica intima | 1.85e-12 | 3 |
heart layer | 1.85e-12 | 3 |
endocardium | 1.85e-12 | 3 |
endocardial cushion | 1.85e-12 | 3 |
presumptive endocardium | 1.85e-12 | 3 |
male genital duct | 2.59e-12 | 3 |
internal male genitalia | 2.59e-12 | 3 |
stratified squamous epithelium | 2.89e-12 | 3 |
layer of synovial tissue | 2.89e-12 | 3 |
synovial joint | 2.89e-12 | 3 |
synovial membrane of synovial joint | 2.89e-12 | 3 |
duct of male reproductive system | 1.44e-09 | 4 |