FFCP PHASE1:Hg19::chr2:209185693..209185720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:209185693..209185720,+ | |||
|coexpression_cluster_id=C857 | |||
|description=CAGE_peak_at_chr2:209185693..209185720,+ | |description=CAGE_peak_at_chr2:209185693..209185720,+ | ||
|id=chr2:209185693..209185720,+ | |id=chr2:209185693..209185720,+ | ||
|ontology_enrichment_celltype=CL:0000236!5.30e-43!14;CL:0000945!9.76e-24!24;CL:0000826!9.76e-24!24;CL:0000838!2.71e-09!52;CL:0000542!4.61e-09!53;CL:0000051!4.61e-09!53 | |ontology_enrichment_celltype=CL:0000236!5.30e-43!14;CL:0000945!9.76e-24!24;CL:0000826!9.76e-24!24;CL:0000838!2.71e-09!52;CL:0000542!4.61e-09!53;CL:0000051!4.61e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.54e-107;13!CL:0000945;5.97e-58;24!CL:0000542;4.93e-21;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,8.14e-100,14;CL:0000945,5.97e-58,24;CL:0000826,5.97e-58,24;CL:0000838,2.62e-26,52;CL:0000542,8.53e-26,53;CL:0000051,8.53e-26,53;CL:0002087,3.02e-11,115;CL:0002031,9.76e-11,120;CL:0000738,2.35e-09,136;CL:0002032,9.77e-08,161;CL:0000837,9.77e-08,161;CL:0000037,2.28e-07,168;CL:0000988,6.16e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.93e-21;53!UBERON:0005425;2.95e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.12e-16!115 | |ontology_enrichment_uberon=UBERON:0007023!3.12e-16!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.95e-15;1!UBERON:0001785;2.95e-15;1!UBERON:0002464;2.95e-15;1!UBERON:0004904;2.95e-15;1!UBERON:0001021;2.95e-15;1!UBERON:0003714;2.77e-08;2!UBERON:0005162;2.77e-08;2!UBERON:0000122;2.77e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.17e-15,1;UBERON:0001785,3.17e-15,1;UBERON:0002464,3.17e-15,1;UBERON:0004904,3.17e-15,1;UBERON:0001021,3.17e-15,1;UBERON:0003902,3.17e-15,1;UBERON:0005425,3.17e-15,1;UBERON:0003714,2.87e-08,2;UBERON:0005162,2.87e-08,2;UBERON:0000122,2.87e-08,2 | |||
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| ||
|short_description=p@chr2:209185693..209185720,+ | |short_description=p@chr2:209185693..209185720,+ | ||
}} | }} |
Latest revision as of 05:34, 29 July 2015
Short description: | p@chr2:209185693..209185720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:209185693..209185720, + |
Coexpression cluster: | C857_non_lymphoma_CD19_acute_diffuse_Burkitt_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 8.14e-100 | 14 |
lymphocyte of B lineage | 5.97e-58 | 24 |
pro-B cell | 5.97e-58 | 24 |
lymphoid lineage restricted progenitor cell | 2.62e-26 | 52 |
lymphocyte | 8.53e-26 | 53 |
common lymphoid progenitor | 8.53e-26 | 53 |
nongranular leukocyte | 3.02e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 9.76e-11 | 120 |
leukocyte | 2.35e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.77e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.77e-08 | 161 |
hematopoietic stem cell | 2.28e-07 | 168 |
hematopoietic cell | 6.16e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.17e-15 | 1 |
cranial nerve | 3.17e-15 | 1 |
nerve trunk | 3.17e-15 | 1 |
nerve connecting eye with brain | 3.17e-15 | 1 |
nerve | 3.17e-15 | 1 |
retinal neural layer | 3.17e-15 | 1 |
presumptive neural retina | 3.17e-15 | 1 |
neural tissue | 2.87e-08 | 2 |
multi cell component structure | 2.87e-08 | 2 |
neuron projection bundle | 2.87e-08 | 2 |