FFCP PHASE1:Hg19::chr2:231808494..231808516,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:231808494..231808516,+ | |||
|coexpression_cluster_id=C730 | |coexpression_cluster_id=C730 | ||
|description=CAGE_peak_at_chr2:231808494..231808516,+ | |description=CAGE_peak_at_chr2:231808494..231808516,+ | ||
|id=chr2:231808494..231808516,+ | |id=chr2:231808494..231808516,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.45e-30!182;CL:0000037!2.32e-27!172;CL:0000566!2.32e-27!172;CL:0002032!2.41e-27!165;CL:0000837!2.41e-27!165;CL:0000738!1.30e-23!140;CL:0002031!1.07e-20!124;CL:0000453!5.61e-19!5;CL:0002087!1.25e-18!119;CL:0000945!1.09e-15!24;CL:0000826!1.09e-15!24;CL:0000763!4.82e-14!112;CL:0000049!4.82e-14!112;CL:0000838!9.77e-14!52;CL:0000542!2.10e-13!53;CL:0000051!2.10e-13!53;CL:0000990!2.28e-10!8;CL:0002009!1.53e-09!65;CL:0002057!3.78e-09!42;CL:0000557!1.89e-08!71;CL:0001014!1.99e-08!2;CL:0001016!1.99e-08!2;CL:0000451!2.08e-08!10;CL:0000860!2.25e-08!45;CL:0000785!4.22e-08!2;CL:0000955!4.22e-08!2;CL:0000818!4.22e-08!2;CL:0000954!4.22e-08!2;CL:0000816!4.22e-08!2;CL:0000134!5.58e-08!358;CL:0002320!1.21e-07!365;CL:0002194!2.78e-07!63;CL:0000576!2.78e-07!63;CL:0000040!2.78e-07!63;CL:0000559!2.78e-07!63 | |ontology_enrichment_celltype=CL:0000988!2.45e-30!182;CL:0000037!2.32e-27!172;CL:0000566!2.32e-27!172;CL:0002032!2.41e-27!165;CL:0000837!2.41e-27!165;CL:0000738!1.30e-23!140;CL:0002031!1.07e-20!124;CL:0000453!5.61e-19!5;CL:0002087!1.25e-18!119;CL:0000945!1.09e-15!24;CL:0000826!1.09e-15!24;CL:0000763!4.82e-14!112;CL:0000049!4.82e-14!112;CL:0000838!9.77e-14!52;CL:0000542!2.10e-13!53;CL:0000051!2.10e-13!53;CL:0000990!2.28e-10!8;CL:0002009!1.53e-09!65;CL:0002057!3.78e-09!42;CL:0000557!1.89e-08!71;CL:0001014!1.99e-08!2;CL:0001016!1.99e-08!2;CL:0000451!2.08e-08!10;CL:0000860!2.25e-08!45;CL:0000785!4.22e-08!2;CL:0000955!4.22e-08!2;CL:0000818!4.22e-08!2;CL:0000954!4.22e-08!2;CL:0000816!4.22e-08!2;CL:0000134!5.58e-08!358;CL:0002320!1.21e-07!365;CL:0002194!2.78e-07!63;CL:0000576!2.78e-07!63;CL:0000040!2.78e-07!63;CL:0000559!2.78e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.05e-35;5!CL:0000990;1.23e-19;8!CL:0000451;4.87e-16;10!CL:0001014;7.57e-15;2!CL:0001016;7.57e-15;2!CL:0002393;1.53e-10;6!CL:0002397;1.53e-10;6!CL:0000945;5.88e-10;24!CL:0002127;1.31e-08;1!CL:0000911;1.31e-08;1!CL:0000814;1.31e-08;1!CL:0000946;2.79e-08;1!CL:0000786;2.79e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.91e-35,5;CL:0000988,7.68e-22,177;CL:0000738,3.16e-20,136;CL:0000990,1.18e-19,8;CL:0002032,3.04e-18,161;CL:0000837,3.04e-18,161;CL:0000037,2.62e-17,168;CL:0002031,1.00e-16,120;CL:0000451,4.72e-16,10;CL:0001014,6.82e-15,2;CL:0001016,6.82e-15,2;CL:0002087,1.06e-13,115;CL:0000838,9.44e-12,52;CL:0000542,1.69e-11,53;CL:0000051,1.69e-11,53;CL:0000945,5.93e-10,24;CL:0000826,5.93e-10,24;CL:0002127,1.31e-08,1;CL:0000914,1.31e-08,1;CL:0000911,1.31e-08,1;CL:0000814,1.31e-08,1;CL:0002042,1.31e-08,1;CL:0002039,1.31e-08,1;CL:0002040,1.31e-08,1;CL:0002041,1.31e-08,1;CL:0000946,2.69e-08,1;CL:0000786,2.69e-08,1;CL:0000980,2.69e-08,1;CL:0000763,3.89e-08,108;CL:0000049,3.89e-08,108;CL:0002009,2.20e-07,61;CL:0002393,3.26e-07,9;CL:0002397,3.26e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.88e-16!10;DOID:2531!9.07e-12!51;DOID:0060083!9.07e-12!51 | |ontology_enrichment_disease=DOID:0060058!1.88e-16!10;DOID:2531!9.07e-12!51;DOID:0060083!9.07e-12!51 | ||
|ontology_enrichment_disease_v019=DOID:630;2.09e-08;1!DOID:0050177;2.09e-08;1!DOID:0050427;2.09e-08;1!DOID:0060060;3.21e-08;1!DOID:0060061;3.21e-08;1!DOID:8691;3.21e-08;1!DOID:0060058;7.96e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.17e-08,1;DOID:0050177,2.17e-08,1;DOID:0050427,2.17e-08,1;DOID:0060060,3.10e-08,1;DOID:0060061,3.10e-08,1;DOID:8691,3.10e-08,1;DOID:0060058,7.88e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.79e-12!102;UBERON:0003061!3.79e-12!102;UBERON:0002193!1.00e-11!112;UBERON:0002371!3.53e-08!80;UBERON:0002405!6.43e-08!115;UBERON:0001474!2.33e-07!86;UBERON:0002384!3.47e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!3.79e-12!102;UBERON:0003061!3.79e-12!102;UBERON:0002193!1.00e-11!112;UBERON:0002371!3.53e-08!80;UBERON:0002405!6.43e-08!115;UBERON:0001474!2.33e-07!86;UBERON:0002384!3.47e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.20e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.26e-11,98;UBERON:0003061,6.26e-11,98;UBERON:0002193,1.10e-09,108;UBERON:0002331,4.20e-07,10;UBERON:0000358,4.20e-07,10;UBERON:0000307,4.20e-07,10;UBERON:0000091,4.20e-07,10;UBERON:0000087,4.20e-07,10;UBERON:0007010,4.20e-07,10;UBERON:0007806,4.20e-07,10;UBERON:0008780,4.20e-07,10;UBERON:0005728,4.20e-07,10;UBERON:0002405,8.30e-07,93 | |||
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|short_description=p@chr2:231808494..231808516,+ | |short_description=p@chr2:231808494..231808516,+ | ||
}} | }} |
Latest revision as of 07:34, 29 July 2015
Short description: | p@chr2:231808494..231808516, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:231808494..231808516, + |
Coexpression cluster: | C730_migratory_cord_Mast_B_b_CD14_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.26e-11 | 98 |
blood island | 6.26e-11 | 98 |
hemolymphoid system | 1.10e-09 | 108 |
umbilical cord | 4.20e-07 | 10 |
blastocyst | 4.20e-07 | 10 |
blastula | 4.20e-07 | 10 |
bilaminar disc | 4.20e-07 | 10 |
inner cell mass | 4.20e-07 | 10 |
cleaving embryo | 4.20e-07 | 10 |
connecting stalk | 4.20e-07 | 10 |
inner cell mass derived epiblast | 4.20e-07 | 10 |
extraembryonic mesoderm | 4.20e-07 | 10 |
immune system | 8.30e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.17e-08 | 1 |
monogenic disease | 2.17e-08 | 1 |
xeroderma pigmentosum | 2.17e-08 | 1 |
non-Hodgkin lymphoma | 3.10e-08 | 1 |
cutaneous T cell lymphoma | 3.10e-08 | 1 |
mycosis fungoides | 3.10e-08 | 1 |
lymphoma | 7.88e-07 | 10 |