FFCP PHASE1:Hg19::chr2:43370293..43370297,-: Difference between revisions
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|id=chr2:43370293..43370297,-
|short_description=p@chr2:43370293..43370297,-
|description=CAGE_peak_at_chr2:43370293..43370297,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:43370293..43370297,- | |||
|description=CAGE_peak_at_chr2:43370293..43370297,- | |||
|id=chr2:43370293..43370297,- | |||
|ontology_enrichment_celltype=CL:0000084!1.89e-32!25;CL:0000827!1.89e-32!25;CL:0000625!3.84e-29!11;CL:0000791!4.26e-27!18;CL:0000789!4.26e-27!18;CL:0002420!4.26e-27!18;CL:0002419!4.26e-27!18;CL:0000790!4.26e-27!18;CL:0000838!5.94e-22!52;CL:0000542!1.80e-21!53;CL:0000051!1.80e-21!53;CL:0000623!4.41e-16!3;CL:0000825!4.41e-16!3;CL:0002087!3.99e-14!119;CL:0000738!1.15e-12!140;CL:0002031!1.30e-10!124;CL:0000037!1.63e-10!172;CL:0000566!1.63e-10!172;CL:0000988!1.15e-09!182;CL:0002032!6.11e-09!165;CL:0000837!6.11e-09!165;CL:0000842!1.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.05e-29;1!CL:0000911;2.05e-29;1!CL:0000814;2.05e-29;1!CL:0000084;1.51e-28;25!CL:0000791;6.52e-15;18!CL:0000789;6.52e-15;18!CL:0002419;6.52e-15;18!CL:0000625;2.36e-11;11!CL:0000542;1.32e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.20e-29,1;CL:0000914,4.20e-29,1;CL:0000911,4.20e-29,1;CL:0000814,4.20e-29,1;CL:0002042,4.20e-29,1;CL:0002039,4.20e-29,1;CL:0002040,4.20e-29,1;CL:0002041,4.20e-29,1;CL:0000084,1.51e-28,25;CL:0000827,1.51e-28,25;CL:0000893,2.74e-15,2;CL:0002489,2.74e-15,2;CL:0000809,2.74e-15,2;CL:0000808,2.74e-15,2;CL:0000894,2.74e-15,2;CL:0000806,2.74e-15,2;CL:0000807,2.74e-15,2;CL:0000805,2.74e-15,2;CL:0002425,2.74e-15,2;CL:0000791,6.84e-15,18;CL:0000789,6.84e-15,18;CL:0002420,6.84e-15,18;CL:0002419,6.84e-15,18;CL:0000790,6.84e-15,18;CL:0000838,5.84e-14,52;CL:0000542,1.05e-13,53;CL:0000051,1.05e-13,53;CL:0000625,2.18e-11,11 | |||
|ontology_enrichment_development_v019=CL:0002425;1.91e-15;2!CL:0000790;6.52e-15;18!CL:0000051;1.32e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.31e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.54e-12!4;UBERON:0005058!2.54e-12!4;UBERON:0009113!2.54e-12!4;UBERON:0003295!2.54e-12!4;UBERON:0005562!2.54e-12!4;UBERON:0004177!8.53e-12!7;UBERON:0003351!2.31e-08!6;UBERON:0001042!2.72e-08!10;UBERON:0009145!2.72e-08!10;UBERON:0006562!1.52e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.91e-15;2!UBERON:0005058;1.91e-15;2!UBERON:0009113;1.91e-15;2!UBERON:0004177;5.86e-07;5!UBERON:0005057;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.61e-29,4;UBERON:0005058,5.61e-29,4;UBERON:0009113,5.61e-29,4;UBERON:0003295,5.61e-29,4;UBERON:0005562,5.61e-29,4;UBERON:0003351,1.04e-19,6;UBERON:0004177,4.73e-17,7;UBERON:0005057,4.73e-17,7;UBERON:0000974,2.98e-12,10;UBERON:0003408,2.98e-12,10;UBERON:0001042,2.98e-12,10;UBERON:0009145,2.98e-12,10;UBERON:0006562,3.14e-11,11;UBERON:0009722,3.14e-11,11;UBERON:0007690,3.14e-11,11;UBERON:0008814,3.14e-07,18;UBERON:0001557,6.77e-07,19 | |||
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|short_description=p@chr2:43370293..43370297,- | |||
}} | }} |
Latest revision as of 10:14, 29 July 2015
Short description: | p@chr2:43370293..43370297, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43370293..43370297, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.20e-29 | 1 |
immature NK T cell | 4.20e-29 | 1 |
effector T cell | 4.20e-29 | 1 |
mature NK T cell | 4.20e-29 | 1 |
immature NK T cell stage IV | 4.20e-29 | 1 |
immature NK T cell stage I | 4.20e-29 | 1 |
immature NK T cell stage II | 4.20e-29 | 1 |
immature NK T cell stage III | 4.20e-29 | 1 |
T cell | 1.51e-28 | 25 |
pro-T cell | 1.51e-28 | 25 |
thymocyte | 2.74e-15 | 2 |
double negative thymocyte | 2.74e-15 | 2 |
double-positive, alpha-beta thymocyte | 2.74e-15 | 2 |
DN4 thymocyte | 2.74e-15 | 2 |
DN1 thymic pro-T cell | 2.74e-15 | 2 |
DN2 thymocyte | 2.74e-15 | 2 |
DN3 thymocyte | 2.74e-15 | 2 |
immature single positive thymocyte | 2.74e-15 | 2 |
early T lineage precursor | 2.74e-15 | 2 |
mature alpha-beta T cell | 6.84e-15 | 18 |
alpha-beta T cell | 6.84e-15 | 18 |
immature T cell | 6.84e-15 | 18 |
mature T cell | 6.84e-15 | 18 |
immature alpha-beta T cell | 6.84e-15 | 18 |
lymphoid lineage restricted progenitor cell | 5.84e-14 | 52 |
lymphocyte | 1.05e-13 | 53 |
common lymphoid progenitor | 1.05e-13 | 53 |
CD8-positive, alpha-beta T cell | 2.18e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.61e-29 | 4 |
hemolymphoid system gland | 5.61e-29 | 4 |
thymic region | 5.61e-29 | 4 |
pharyngeal gland | 5.61e-29 | 4 |
thymus primordium | 5.61e-29 | 4 |
pharyngeal epithelium | 1.04e-19 | 6 |
hemopoietic organ | 4.73e-17 | 7 |
immune organ | 4.73e-17 | 7 |
neck | 2.98e-12 | 10 |
gland of gut | 2.98e-12 | 10 |
chordate pharynx | 2.98e-12 | 10 |
pharyngeal region of foregut | 2.98e-12 | 10 |
pharynx | 3.14e-11 | 11 |
entire pharyngeal arch endoderm | 3.14e-11 | 11 |
early pharyngeal endoderm | 3.14e-11 | 11 |
pharyngeal arch system | 3.14e-07 | 18 |
upper respiratory tract | 6.77e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.31e-07 | 39 |