FFCP PHASE1:Hg19::chr3:120169178..120169187,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:120169178..120169187,+ to FFCP PHASE1:Hg19::chr3:120169178..120169187,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:120169178..120169187,+ | |||
|description=CAGE_peak_at_chr3:120169178..120169187,+ | |||
|id=chr3:120169178..120169187,+ | |||
|ontology_enrichment_celltype=CL:0002620!4.00e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000228;9.70e-09;1!CL:0002372;9.70e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.05e-08,1;CL:0002372,1.05e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.71e-09;1!UBERON:0010227;9.70e-09;1!UBERON:0006242;9.70e-09;1!UBERON:0010115;9.70e-09;1!UBERON:0005425;9.70e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;9.70e-09;1!DOID:17;7.91e-07;5!DOID:450;7.91e-07;5!DOID:66;7.91e-07;5!DOID:423;7.91e-07;5!DOID:0080000;7.91e-07;5!DOID:11722;7.91e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.91e-08,1;DOID:17,4.94e-07,5;DOID:450,4.94e-07,5;DOID:66,4.94e-07,5;DOID:423,4.94e-07,5;DOID:0080000,4.94e-07,5;DOID:11722,4.94e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.68e-14!115;UBERON:0000073!1.40e-07!94;UBERON:0001016!1.40e-07!94;UBERON:0000064!1.63e-07!219;UBERON:0001049!2.79e-07!57;UBERON:0005068!2.79e-07!57;UBERON:0006241!2.79e-07!57;UBERON:0007135!2.79e-07!57;UBERON:0001017!4.16e-07!82;UBERON:0000468!6.71e-07!659;UBERON:0005743!6.95e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;9.70e-09;1!UBERON:0002079;9.70e-09;1!UBERON:0002146;9.70e-09;1!UBERON:0000941;9.70e-09;1!UBERON:0001785;9.70e-09;1!UBERON:0002464;9.70e-09;1!UBERON:0004904;9.70e-09;1!UBERON:0001021;9.70e-09;1!UBERON:0005623;9.70e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.19e-10,114;UBERON:0002363,5.70e-09,1;UBERON:0007645,5.70e-09,1;UBERON:0007647,5.70e-09,1;UBERON:0010115,5.70e-09,1;UBERON:0002079,9.02e-09,1;UBERON:0000941,9.74e-09,1;UBERON:0001785,9.74e-09,1;UBERON:0002464,9.74e-09,1;UBERON:0004904,9.74e-09,1;UBERON:0001021,9.74e-09,1;UBERON:0003902,9.74e-09,1;UBERON:0005425,9.74e-09,1;UBERON:0002146,1.22e-08,1;UBERON:0005623,1.22e-08,1 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,1.61450672119976,0,0.635795703478686,1.80054657650641,0.103052529238439,1.03056216018252,0.18611685633159,0.843881661206331,0.194874010322397,0.757301322732344,0.276149695926898,0,0.710019185033229,0.10075209822764,0,0,0.545492241181669,0,0.121973706129595,0.132529768321485,0,0,0.504641701751257,0,0,0,0,0,0,0.591534000199219,1.01150814046861,0.241011029883482,0.220587945464788,0.217879444092406,0,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0.61384789315225,0,0,0,0.160853921143607,0,0.154209693802656,0,0.574890092096664,0.519254429183621,0.116210378459959,0,0,0,0,0.728364672026868,0,0,0,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0.290033387828457,0.340906509664404,0,0,0,0.638063562472921,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,1.31535265576129,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0,1.26664581178598,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.879049075631364,0,0,0,0.47748896947538,0,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0,1.19548792950642,0.552567831062295,0,0,0,0,0.179736702294654,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,1.44999915086959,0,0,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0.544692317594951,0,0.0769502585037971,0,0,0,0.325942115766024,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,1.64285107034069,0,0,0,0,0,0,0,0,0.173559738335131,0,0.174118413160805,0,0.343972064943233,0.387025325156341,0.0730893170861856,0.164230914106418,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0.126621591911757,0.195551382734803,0,1.92107695265417,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.203996435272644,0.288950589901519,1.20084057741958,0,0,0,0,0.279282401272254,1.3749625440701,0,0.199679000498991,0,0,0.335917362433631,1.08089965062721,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0.321506296930038,0.962776056180637,0.415440338029185,0,0,0,0,0.157611414598396,0,0,0,0,1.42939065274673,0,0,0,0,0.326587360109409,0,0,0,0,0,0,1.68067843270016,0.13223260174269,0,1.40963004463334,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0.544017803369474,9.2755260788399,1.53172788381731,0.983617892129413,0,0,0.122026264901963,0.625954653532499,2.86704597845036,0.221858103073705,0.18628920882415,0,0.249960815924213,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0,0,0,0.147855149989634,0,0.899606224327209,0.465788870628778,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0.686791410365586,0,0,0,0.214441591374926,0,0,0.231522474323834,0.244736704506468,0.179088841081487,0.308801447160972,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0.553033744606923,0,0,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0.558644917973244,0,0,0,0,0,0,4.25089728976755,0.957803154342908,0,0,0.484100767249525,0,1.42769420259154,0,0,0,0,0,0.690359926060101,0.397832444232549,0,0,0,0,0.818859587550484,0.147856086217045,0.202612753855184,0.781078098613847,0.620060389503552,0.253663240775627,0,0.548257766857182,0,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0.263091094251396,0,0.222462803784138,0.156986185701028,0.471346769748006,0.560544326627578,0,0,0.47775168788705,0.500335809236594,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.385870790539723,0.437119121007915,0,0.490296643507811,0,1.37415926980462,0,0,0,0,0.0644578879735772,0,0,0.352894871715692,0,1.46067277649303,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0.253397002022874,0,0,0.0918948995348449,0,0.227336094654718,0,1.65833887891756,0.103432995861895,0.426467963801962,0.476128862927481,0,0,0,0.12729431655633,0,0.435433495793923,0,0.404112318087525,0.143444410785353,0.99798106963804,0.0814032686109745,0.106727345877715,0,0,2.34640942403454,0.244482888365733,0,0,0.402547587182052,0 | |phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,1.61450672119976,0,0.635795703478686,1.80054657650641,0.103052529238439,1.03056216018252,0.18611685633159,0.843881661206331,0.194874010322397,0.757301322732344,0.276149695926898,0,0.710019185033229,0.10075209822764,0,0,0.545492241181669,0,0.121973706129595,0.132529768321485,0,0,0.504641701751257,0,0,0,0,0,0,0.591534000199219,1.01150814046861,0.241011029883482,0.220587945464788,0.217879444092406,0,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0.61384789315225,0,0,0,0.160853921143607,0,0.154209693802656,0,0.574890092096664,0.519254429183621,0.116210378459959,0,0,0,0,0.728364672026868,0,0,0,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0.290033387828457,0.340906509664404,0,0,0,0.638063562472921,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,1.31535265576129,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0,1.26664581178598,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.879049075631364,0,0,0,0.47748896947538,0,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0,1.19548792950642,0.552567831062295,0,0,0,0,0.179736702294654,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,1.44999915086959,0,0,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0.544692317594951,0,0.0769502585037971,0,0,0,0.325942115766024,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,1.64285107034069,0,0,0,0,0,0,0,0,0.173559738335131,0,0.174118413160805,0,0.343972064943233,0.387025325156341,0.0730893170861856,0.164230914106418,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0.126621591911757,0.195551382734803,0,1.92107695265417,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.203996435272644,0.288950589901519,1.20084057741958,0,0,0,0,0.279282401272254,1.3749625440701,0,0.199679000498991,0,0,0.335917362433631,1.08089965062721,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0.321506296930038,0.962776056180637,0.415440338029185,0,0,0,0,0.157611414598396,0,0,0,0,1.42939065274673,0,0,0,0,0.326587360109409,0,0,0,0,0,0,1.68067843270016,0.13223260174269,0,1.40963004463334,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0.544017803369474,9.2755260788399,1.53172788381731,0.983617892129413,0,0,0.122026264901963,0.625954653532499,2.86704597845036,0.221858103073705,0.18628920882415,0,0.249960815924213,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0,0,0,0.147855149989634,0,0.899606224327209,0.465788870628778,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0.686791410365586,0,0,0,0.214441591374926,0,0,0.231522474323834,0.244736704506468,0.179088841081487,0.308801447160972,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0.553033744606923,0,0,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0.558644917973244,0,0,0,0,0,0,4.25089728976755,0.957803154342908,0,0,0.484100767249525,0,1.42769420259154,0,0,0,0,0,0.690359926060101,0.397832444232549,0,0,0,0,0.818859587550484,0.147856086217045,0.202612753855184,0.781078098613847,0.620060389503552,0.253663240775627,0,0.548257766857182,0,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0.263091094251396,0,0.222462803784138,0.156986185701028,0.471346769748006,0.560544326627578,0,0,0.47775168788705,0.500335809236594,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.385870790539723,0.437119121007915,0,0.490296643507811,0,1.37415926980462,0,0,0,0,0.0644578879735772,0,0,0.352894871715692,0,1.46067277649303,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0.253397002022874,0,0,0.0918948995348449,0,0.227336094654718,0,1.65833887891756,0.103432995861895,0.426467963801962,0.476128862927481,0,0,0,0.12729431655633,0,0.435433495793923,0,0.404112318087525,0.143444410785353,0.99798106963804,0.0814032686109745,0.106727345877715,0,0,2.34640942403454,0.244482888365733,0,0,0.402547587182052,0 | ||
|short_description=p@chr3:120169178..120169187,+ | |||
}} | }} |
Latest revision as of 14:53, 29 July 2015
Short description: | p@chr3:120169178..120169187, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:120169178..120169187, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.05e-08 | 1 |
myotube | 1.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.19e-10 | 114 |
dura mater | 5.70e-09 | 1 |
future meninx | 5.70e-09 | 1 |
ectomeninx | 5.70e-09 | 1 |
future dura mater | 5.70e-09 | 1 |
left cardiac atrium | 9.02e-09 | 1 |
cranial nerve II | 9.74e-09 | 1 |
cranial nerve | 9.74e-09 | 1 |
nerve trunk | 9.74e-09 | 1 |
nerve connecting eye with brain | 9.74e-09 | 1 |
nerve | 9.74e-09 | 1 |
retinal neural layer | 9.74e-09 | 1 |
presumptive neural retina | 9.74e-09 | 1 |
pulmonary valve | 1.22e-08 | 1 |
semi-lunar valve | 1.22e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.91e-08 | 1 |
musculoskeletal system disease | 4.94e-07 | 5 |
myotonic disease | 4.94e-07 | 5 |
muscle tissue disease | 4.94e-07 | 5 |
myopathy | 4.94e-07 | 5 |
muscular disease | 4.94e-07 | 5 |
myotonic dystrophy | 4.94e-07 | 5 |