FFCP PHASE1:Hg19::chr3:73025099..73025103,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:73025099..73025103,+ | |||
|description=CAGE_peak_at_chr3:73025099..73025103,+ | |description=CAGE_peak_at_chr3:73025099..73025103,+ | ||
|id=chr3:73025099..73025103,+ | |id=chr3:73025099..73025103,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002195;3.26e-13;2!CL:0002571;3.26e-13;2!CL:0002564;8.38e-09;3!CL:0002622;1.61e-08;3!CL:0000342;5.28e-07;1!CL:0002565;5.28e-07;1!CL:0002591;5.28e-07;1 | |ontology_enrichment_celltype_v019=CL:0002195;3.26e-13;2!CL:0002571;3.26e-13;2!CL:0002564;8.38e-09;3!CL:0002622;1.61e-08;3!CL:0000342;5.28e-07;1!CL:0002565;5.28e-07;1!CL:0002591;5.28e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002195,3.48e-13,2;CL:0002571,3.48e-13,2;CL:0002564,1.06e-08,3;CL:0002622,1.96e-08,3;CL:0000342,4.85e-07,1;CL:0002565,4.85e-07,1;CL:0002591,7.29e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;5.28e-07;1!UBERON:0003099;5.28e-07;1!UBERON:0003852;5.28e-07;1 | |ontology_enrichment_development_v019=UBERON:0010227;5.28e-07;1!UBERON:0003099;5.28e-07;1!UBERON:0003852;5.28e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;1.91e-07;1 | |ontology_enrichment_disease_v019=DOID:5662;1.91e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5662,1.55e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.73e-07!143;UBERON:0007100!4.51e-07!27 | |ontology_enrichment_uberon=UBERON:0005256!2.73e-07!143;UBERON:0007100!4.51e-07!27 | ||
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|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0.783556884599516,0.245733936501509,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.66221330396589,0,0,2.02785126545153,0,0.973269740605272,0,0.221729397462564,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.759783069987479,0.132409180813219,0,0.709336764396714,0,0,0,0.622422070799533,0.269421344139376,0,0.151357427644931,1.15235184896,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0.309977343527296,0,0,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,1.22595118319608,0.300476117813194,0.340296549480063,0,0,0.211931901159562,0,0.103052529238439,0,0.37223371266318,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0.237270619111097,0,0,0,0,0,1.6462960453256,0,0,0,0,0.882926198829301,0,1.3725424823882,0,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.2933531432838,0.517086863031111,0,0,0,0,0,0,0,2.00169191121407,1.08524321078289,0,0.325736184293735,2.13235169245527,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,1.2269149171914,2.00068208423871,0,2.07970861530807,0.713715955188647,0.473107245101804,0.35142424497814,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,2.04682899626681,0,0,0.154209693802656,0.887808626565635,0.574890092096664,0,0,0.120859449591622,0,0.0920809889358963,1.37777337797528,1.0925470080403,0.393373244878272,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,1.35339005608971,0.616194468458578,0,0,1.07420244868274,0.290033387828457,0.170453254832202,3.73934549716297,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.762520775695299,0.255897791311334,0,0,0,0,0.54907405947211,0.471249609382746,0.202182481573316,0,0,0,0,0,0,0.565621727814851,1.13008116620243,0,1.32687795048244,0,0,0.655894752046633,0,0.30982349809975,0,0.430234056612155,0.785992328104969,0,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.427296284509893,0,0,0,0,0.0711418433484141,0.478278818186467,0,0,0,0,1.12318871245384,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.36408156524854,0,0.284136146806413,0,0,0,0,0,1.55832187032068,0.329607748453519,0,0,0.552567831062295,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0,0,0,0.10893846351899,0,0.153900517007594,1.59518878185802,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0.19606253431774,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0.505492637027904,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.873633341210151,0.171986032471617,0.0967563312890851,0,0,0.290967049465258,0.0882561266915003,0.677942222341597,0.411125773940253,0.397429223405979,0,0,0.0801588202515337,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0.203996435272644,0.577901179803038,0,0.136905378891993,0,0.859530882839914,0,0.837847203816763,0.458320848023367,0.717873024576814,0.599037001496973,0.429226048136571,0.446342914883745,0.403100834920358,0.360299883542404,0,0.630265458457789,0.412079291905832,0.202210631562555,0.0984274815147488,0,0,0.272406812223151,0.643012593860077,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.320362237703084,0,0,0,0.197611631897944,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0.621748802331122,0.147855149989634,0,1.34940933649081,0.155262956876259,0,0.53168342911599,1.04349012362347,0,0.380805212168795,0,0,0.214821114084977,0,0.796191777397232,0,0.686791410365586,0.673498977531838,0,0.192619830407303,0.428883182749851,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0,0,0.337884881306145,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0.318004350653419,0,0,1.05802783107205,0,0.256916900385838,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,1.05294459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| ||
|short_description=p@chr3:73025099..73025103,+ | |short_description=p@chr3:73025099..73025103,+ | ||
}} | }} |
Latest revision as of 23:35, 29 July 2015
Short description: | p@chr3:73025099..73025103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:73025099..73025103, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 3.48e-13 | 2 |
hepatic mesenchymal stem cell | 3.48e-13 | 2 |
nucleus pulposus cell of intervertebral disc | 1.06e-08 | 3 |
prostate stromal cell | 1.96e-08 | 3 |
pigment cell (sensu Vertebrata) | 4.85e-07 | 1 |
iris pigment epithelial cell | 4.85e-07 | 1 |
smooth muscle cell of the pulmonary artery | 7.29e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.55e-07 | 1 |