FFCP PHASE1:Hg19::chr3:98700171..98700194,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=269bp_to_ENST00000473756_5end | |association_with_transcript=269bp_to_ENST00000473756_5end | ||
|cluster_id=chr3:98700171..98700194,+ | |||
|coexpression_cluster_id=C1081 | |||
|description=CAGE_peak_1_at_ENST00000473756_5end | |description=CAGE_peak_1_at_ENST00000473756_5end | ||
|id=chr3:98700171..98700194,+ | |id=chr3:98700171..98700194,+ | ||
|ontology_enrichment_celltype=CL:0000680!9.87e-14!57;CL:0000056!9.87e-14!57;CL:0000355!9.87e-14!57;CL:0000192!4.96e-13!42;CL:0000514!4.96e-13!42;CL:0000359!6.16e-13!32;CL:0000187!1.32e-12!54;CL:0000183!6.61e-12!59;CL:0000393!4.56e-10!60;CL:0000211!4.56e-10!60;CL:0000055!1.52e-08!180;CL:0000222!2.89e-08!119;CL:0002539!9.59e-08!10;CL:0000220!2.48e-07!246;CL:0002321!5.15e-07!248;CL:1000497!8.07e-07!18;CL:0002518!8.07e-07!18 | |ontology_enrichment_celltype=CL:0000680!9.87e-14!57;CL:0000056!9.87e-14!57;CL:0000355!9.87e-14!57;CL:0000192!4.96e-13!42;CL:0000514!4.96e-13!42;CL:0000359!6.16e-13!32;CL:0000187!1.32e-12!54;CL:0000183!6.61e-12!59;CL:0000393!4.56e-10!60;CL:0000211!4.56e-10!60;CL:0000055!1.52e-08!180;CL:0000222!2.89e-08!119;CL:0002539!9.59e-08!10;CL:0000220!2.48e-07!246;CL:0002321!5.15e-07!248;CL:1000497!8.07e-07!18;CL:0002518!8.07e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.79e-16;32!CL:0002539;1.35e-10;10!CL:1000497;1.49e-10;17!CL:0002518;1.49e-10;17!CL:1000507;3.34e-10;10!CL:1000494;3.34e-10;10!CL:0000192;2.97e-09;43!CL:1000449;4.77e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.78e-17,32;CL:0000192,4.37e-12,43;CL:0000514,4.37e-12,43;CL:0000680,1.16e-10,58;CL:0000056,1.16e-10,58;CL:0000355,1.16e-10,58;CL:0002539,1.29e-10,10;CL:1000497,1.55e-10,17;CL:0002518,1.55e-10,17;CL:1000507,3.65e-10,10;CL:1000494,3.65e-10,10;CL:0000187,1.08e-09,55;CL:1000449,5.77e-09,15;CL:0000393,5.22e-08,61;CL:0000211,5.22e-08,61;CL:0002321,2.40e-07,250;CL:0000222,2.84e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.97e-09;43 | |||
|ontology_enrichment_disease=DOID:120!1.17e-09!27;DOID:2394!2.78e-09!14;DOID:193!2.65e-08!29 | |ontology_enrichment_disease=DOID:120!1.17e-09!27;DOID:2394!2.78e-09!14;DOID:193!2.65e-08!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.28e-14;14!DOID:120;6.12e-12;27!DOID:193;9.81e-11;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.85e-14,14;DOID:120,4.68e-12,27;DOID:193,7.69e-11,29 | |||
|ontology_enrichment_uberon=UBERON:0000486!3.34e-13!82;UBERON:0004290!5.12e-13!70;UBERON:0002385!7.16e-13!63;UBERON:0001015!7.16e-13!63;UBERON:0000383!7.16e-13!63;UBERON:0001134!7.25e-13!61;UBERON:0002036!7.25e-13!61;UBERON:0003082!7.25e-13!61;UBERON:0005256!8.60e-13!143;UBERON:0000914!4.89e-12!83;UBERON:0002329!4.89e-12!83;UBERON:0003077!4.89e-12!83;UBERON:0003059!4.89e-12!83;UBERON:0007282!4.89e-12!83;UBERON:0009618!4.89e-12!83;UBERON:0007285!4.89e-12!83;UBERON:0001637!6.26e-08!42;UBERON:0003509!6.26e-08!42;UBERON:0004572!6.26e-08!42;UBERON:0000119!9.27e-08!312;UBERON:0004237!9.59e-08!10;UBERON:0004695!9.59e-08!10;UBERON:0002111!9.59e-08!10;UBERON:0004178!9.59e-08!10;UBERON:0000483!1.30e-07!309;UBERON:0001135!1.35e-07!15;UBERON:0007625!2.53e-07!11;UBERON:0004573!4.07e-07!33;UBERON:0004571!4.07e-07!33 | |ontology_enrichment_uberon=UBERON:0000486!3.34e-13!82;UBERON:0004290!5.12e-13!70;UBERON:0002385!7.16e-13!63;UBERON:0001015!7.16e-13!63;UBERON:0000383!7.16e-13!63;UBERON:0001134!7.25e-13!61;UBERON:0002036!7.25e-13!61;UBERON:0003082!7.25e-13!61;UBERON:0005256!8.60e-13!143;UBERON:0000914!4.89e-12!83;UBERON:0002329!4.89e-12!83;UBERON:0003077!4.89e-12!83;UBERON:0003059!4.89e-12!83;UBERON:0007282!4.89e-12!83;UBERON:0009618!4.89e-12!83;UBERON:0007285!4.89e-12!83;UBERON:0001637!6.26e-08!42;UBERON:0003509!6.26e-08!42;UBERON:0004572!6.26e-08!42;UBERON:0000119!9.27e-08!312;UBERON:0004237!9.59e-08!10;UBERON:0004695!9.59e-08!10;UBERON:0002111!9.59e-08!10;UBERON:0004178!9.59e-08!10;UBERON:0000483!1.30e-07!309;UBERON:0001135!1.35e-07!15;UBERON:0007625!2.53e-07!11;UBERON:0004573!4.07e-07!33;UBERON:0004571!4.07e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.26e-10;33!UBERON:0004571;1.26e-10;33!UBERON:0004237;1.35e-10;10!UBERON:0004695;1.35e-10;10!UBERON:0002111;1.35e-10;10!UBERON:0004178;1.35e-10;10!UBERON:0007625;2.81e-10;11!UBERON:0004211;3.34e-10;10!UBERON:0009773;3.34e-10;10!UBERON:0001231;3.34e-10;10!UBERON:0004810;3.34e-10;10!UBERON:0006555;4.77e-09;15!UBERON:0004819;4.77e-09;15!UBERON:0001285;4.77e-09;15!UBERON:0007684;4.77e-09;15!UBERON:0000992;7.51e-09;13!UBERON:0001637;3.63e-08;42!UBERON:0003509;3.63e-08;42!UBERON:0004572;3.63e-08;42!UBERON:0003914;4.39e-07;74!UBERON:0002118;4.69e-07;5!UBERON:0003134;6.57e-07;33 | |||
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| ||
|short_description=p1@ENST00000473756 | |short_description=p1@ENST00000473756 | ||
}} | }} |
Latest revision as of 00:10, 30 July 2015
Short description: | p1@ENST00000473756 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000473756_5end |
Coexpression cluster: | C1081_papillotubular_Renal_Mast_giant_meningioma_mucinous_gall |
Association with transcript: | 269bp_to_ENST00000473756_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.78e-17 | 32 |
smooth muscle cell | 4.37e-12 | 43 |
smooth muscle myoblast | 4.37e-12 | 43 |
muscle precursor cell | 1.16e-10 | 58 |
myoblast | 1.16e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-10 | 58 |
aortic smooth muscle cell | 1.29e-10 | 10 |
kidney cell | 1.55e-10 | 17 |
kidney epithelial cell | 1.55e-10 | 17 |
kidney tubule cell | 3.65e-10 | 10 |
nephron tubule epithelial cell | 3.65e-10 | 10 |
muscle cell | 1.08e-09 | 55 |
epithelial cell of nephron | 5.77e-09 | 15 |
electrically responsive cell | 5.22e-08 | 61 |
electrically active cell | 5.22e-08 | 61 |
embryonic cell | 2.40e-07 | 250 |
mesodermal cell | 2.84e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.85e-14 | 14 |
female reproductive organ cancer | 4.68e-12 | 27 |
reproductive organ cancer | 7.69e-11 | 29 |