FFCP PHASE1:Hg19::chr4:103680719..103680723,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:103680719..103680723,-
|short_description=p@chr4:103680719..103680723,-
|description=CAGE_peak_at_chr4:103680719..103680723,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:103680719..103680723,- | |||
|coexpression_cluster_id=C622 | |||
|description=CAGE_peak_at_chr4:103680719..103680723,- | |||
|id=chr4:103680719..103680723,- | |||
|ontology_enrichment_celltype=CL:0000738!6.26e-47!140;CL:0000037!5.78e-42!172;CL:0000566!5.78e-42!172;CL:0002087!1.90e-40!119;CL:0002031!3.36e-39!124;CL:0000988!3.49e-38!182;CL:0002032!7.60e-38!165;CL:0000837!7.60e-38!165;CL:0000766!4.46e-34!76;CL:0002057!3.33e-33!42;CL:0000557!8.04e-32!71;CL:0002009!7.69e-31!65;CL:0000839!1.17e-30!70;CL:0002194!2.36e-30!63;CL:0000576!2.36e-30!63;CL:0000040!2.36e-30!63;CL:0000559!2.36e-30!63;CL:0000860!3.46e-30!45;CL:0000763!8.08e-27!112;CL:0000049!8.08e-27!112;CL:0002393!2.18e-11!9;CL:0002397!2.18e-11!9;CL:0000134!2.63e-10!358;CL:0002320!3.40e-10!365;CL:0000542!5.88e-10!53;CL:0000051!5.88e-10!53;CL:0000838!3.13e-09!52;CL:0000219!2.90e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0002393;9.30e-29;6!CL:0002397;9.30e-29;6!CL:0000775;3.22e-15;3!CL:0000576;9.00e-11;48!CL:0000766;6.46e-10;69!CL:0000738;4.34e-08;136!CL:0000236;6.10e-08;13!CL:0002087;6.43e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.56e-29,9;CL:0002397,2.56e-29,9;CL:0000473,1.73e-20,48;CL:0000234,1.73e-20,48;CL:0000738,7.99e-20,136;CL:0000860,4.49e-19,42;CL:0002057,4.49e-19,42;CL:0000766,5.27e-19,72;CL:0002087,3.72e-18,115;CL:0002194,3.99e-16,59;CL:0000576,3.99e-16,59;CL:0000040,3.99e-16,59;CL:0000559,3.99e-16,59;CL:0000037,1.26e-15,168;CL:0002009,1.46e-15,61;CL:0000775,3.00e-15,3;CL:0002031,5.76e-15,120;CL:0000988,1.03e-14,177;CL:0002032,2.28e-14,161;CL:0000837,2.28e-14,161;CL:0000839,2.67e-14,66;CL:0000557,4.54e-14,67;CL:0000763,3.78e-12,108;CL:0000049,3.78e-12,108;CL:0000236,1.93e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.07e-11;1!CL:0002057;1.89e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.90e-29!80;UBERON:0001474!2.60e-26!86;UBERON:0002390!1.24e-25!102;UBERON:0003061!1.24e-25!102;UBERON:0002193!8.28e-23!112;UBERON:0004765!2.20e-22!101;UBERON:0001434!2.20e-22!101;UBERON:0002405!2.15e-21!115;UBERON:0002384!3.46e-10!375;UBERON:0002204!5.65e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.07e-11;1!UBERON:0001785;1.07e-11;1!UBERON:0002464;1.07e-11;1!UBERON:0004904;1.07e-11;1!UBERON:0001021;1.07e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.90e-12,76;UBERON:0000941,1.19e-11,1;UBERON:0001785,1.19e-11,1;UBERON:0002464,1.19e-11,1;UBERON:0004904,1.19e-11,1;UBERON:0001021,1.19e-11,1;UBERON:0003902,1.19e-11,1;UBERON:0005425,1.19e-11,1;UBERON:0001474,2.81e-11,82;UBERON:0002390,3.26e-11,98;UBERON:0003061,3.26e-11,98;UBERON:0004765,3.65e-10,90;UBERON:0002193,4.89e-10,108;UBERON:0002405,8.53e-10,93;UBERON:0001434,5.09e-09,100 | |||
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| ||
|short_description=p@chr4:103680719..103680723,- | |||
}} | }} |
Latest revision as of 00:32, 30 July 2015
Short description: | p@chr4:103680719..103680723, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:103680719..103680723, - |
Coexpression cluster: | C622_CD19_CD14_immature_Peripheral_Neutrophils_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.56e-29 | 9 |
CD14-positive, CD16-positive monocyte | 2.56e-29 | 9 |
defensive cell | 1.73e-20 | 48 |
phagocyte | 1.73e-20 | 48 |
leukocyte | 7.99e-20 | 136 |
classical monocyte | 4.49e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.49e-19 | 42 |
myeloid leukocyte | 5.27e-19 | 72 |
nongranular leukocyte | 3.72e-18 | 115 |
monopoietic cell | 3.99e-16 | 59 |
monocyte | 3.99e-16 | 59 |
monoblast | 3.99e-16 | 59 |
promonocyte | 3.99e-16 | 59 |
hematopoietic stem cell | 1.26e-15 | 168 |
macrophage dendritic cell progenitor | 1.46e-15 | 61 |
neutrophil | 3.00e-15 | 3 |
hematopoietic lineage restricted progenitor cell | 5.76e-15 | 120 |
hematopoietic cell | 1.03e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.28e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.28e-14 | 161 |
myeloid lineage restricted progenitor cell | 2.67e-14 | 66 |
granulocyte monocyte progenitor cell | 4.54e-14 | 67 |
myeloid cell | 3.78e-12 | 108 |
common myeloid progenitor | 3.78e-12 | 108 |
B cell | 1.93e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.90e-12 | 76 |
cranial nerve II | 1.19e-11 | 1 |
cranial nerve | 1.19e-11 | 1 |
nerve trunk | 1.19e-11 | 1 |
nerve connecting eye with brain | 1.19e-11 | 1 |
nerve | 1.19e-11 | 1 |
retinal neural layer | 1.19e-11 | 1 |
presumptive neural retina | 1.19e-11 | 1 |
bone element | 2.81e-11 | 82 |
hematopoietic system | 3.26e-11 | 98 |
blood island | 3.26e-11 | 98 |
skeletal element | 3.65e-10 | 90 |
hemolymphoid system | 4.89e-10 | 108 |
immune system | 8.53e-10 | 93 |
skeletal system | 5.09e-09 | 100 |