FFCP PHASE1:Hg19::chr4:145566965..145566978,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:145566965..145566978,-
|short_description=p2@ENST00000503066
|description=CAGE_peak_2_at_ENST00000503066_5end
|association_with_transcript=85bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=85bp_to_ENST00000503066_5end | |||
|cluster_id=chr4:145566965..145566978,- | |||
|coexpression_cluster_id=C606 | |||
|description=CAGE_peak_2_at_ENST00000503066_5end | |||
|id=chr4:145566965..145566978,- | |||
|ontology_enrichment_celltype=CL:0002139!6.83e-28!24;CL:0000115!2.30e-23!35;CL:0000071!3.54e-22!18;CL:0002546!3.54e-22!18;CL:0000222!2.09e-21!119;CL:0002078!3.38e-19!44;CL:0000213!3.96e-14!57;CL:0000215!3.96e-14!57;CL:1000413!5.20e-12!9;CL:0000359!7.73e-12!32;CL:0000183!3.77e-10!59;CL:0000192!4.80e-09!42;CL:0000514!4.80e-09!42;CL:0000680!7.23e-09!57;CL:0000056!7.23e-09!57;CL:0000355!7.23e-09!57;CL:0002544!1.24e-08!6;CL:0002494!2.27e-08!16;CL:0002543!2.32e-08!6;CL:0000187!1.78e-07!54;CL:0005020!2.73e-07!6;CL:0002138!2.73e-07!6;CL:0005022!2.73e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.13e-71;24!CL:0000071;8.19e-65;18!CL:0000115;3.92e-58;36!CL:0002078;2.62e-35;45!CL:1000413;1.39e-33;9!CL:0000213;3.28e-26;58!CL:0000215;3.28e-26;58!CL:0002544;3.76e-23;6!CL:0002543;2.93e-22;6!CL:0002144;4.09e-12;3!CL:0002618;4.09e-12;3!CL:0002188;6.21e-12;5!CL:0000076;9.59e-11;63!CL:0002138;4.82e-10;6!CL:0002545;7.91e-09;2!CL:1000746;1.56e-08;7!CL:1000612;1.56e-08;7!CL:0002494;2.38e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.65e-71,24;CL:0000115,1.32e-69,36;CL:0000071,6.18e-65,18;CL:0002546,6.18e-65,18;CL:0002078,3.13e-54,45;CL:0000213,1.43e-43,58;CL:0000215,1.43e-43,58;CL:1000413,1.56e-33,9;CL:0000222,8.63e-31,121;CL:0002544,3.58e-23,6;CL:0002543,2.45e-22,6;CL:0000076,5.75e-17,63;CL:0002144,3.29e-12,3;CL:0002618,5.12e-12,3;CL:0002321,6.87e-12,250;CL:0002188,1.04e-11,5;CL:0005020,4.83e-10,6;CL:0002138,4.83e-10,6;CL:0005022,4.83e-10,6;CL:0002545,7.63e-09,2;CL:1000746,2.23e-08,7;CL:1000612,2.23e-08,7;CL:0002494,2.78e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;8.19e-65;18!CL:0000222;4.74e-11;121!CL:0005022;4.82e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.51e-35!79;UBERON:0007798!2.51e-35!79;UBERON:0000055!1.16e-31!69;UBERON:0004535!1.37e-30!110;UBERON:0001009!4.10e-29!113;UBERON:0001981!1.68e-28!60;UBERON:0007500!1.68e-28!60;UBERON:0004537!1.68e-28!60;UBERON:0006965!1.68e-28!60;UBERON:0000025!1.06e-27!194;UBERON:0004872!2.86e-27!84;UBERON:0003914!5.93e-26!118;UBERON:0000477!3.76e-24!286;UBERON:0004111!4.95e-24!241;UBERON:0000119!2.79e-23!312;UBERON:0001986!3.54e-22!18;UBERON:0004638!3.54e-22!18;UBERON:0004852!3.54e-22!18;UBERON:0000483!7.88e-22!309;UBERON:0001637!9.18e-21!42;UBERON:0003509!9.18e-21!42;UBERON:0004572!9.18e-21!42;UBERON:0000487!8.98e-17!22;UBERON:0000490!3.78e-16!138;UBERON:0006914!1.21e-15!25;UBERON:0004573!1.04e-14!33;UBERON:0004571!1.04e-14!33;UBERON:0003915!5.20e-12!9;UBERON:0004700!5.20e-12!9;UBERON:0001917!5.20e-12!9;UBERON:0000947!3.71e-11!21;UBERON:0010191!3.71e-11!21;UBERON:0002385!3.79e-10!63;UBERON:0001015!3.79e-10!63;UBERON:0000383!3.79e-10!63;UBERON:0001134!2.13e-09!61;UBERON:0002036!2.13e-09!61;UBERON:0003082!2.13e-09!61;UBERON:0004290!4.99e-09!70;UBERON:0000481!5.80e-08!347;UBERON:0001638!1.10e-07!9;UBERON:0003920!1.10e-07!9;UBERON:0004582!1.10e-07!9;UBERON:0000948!3.34e-07!24;UBERON:0005498!3.34e-07!24;UBERON:0004140!3.34e-07!24;UBERON:0009881!3.34e-07!24;UBERON:0004141!3.34e-07!24;UBERON:0003084!3.34e-07!24;UBERON:0007005!3.34e-07!24;UBERON:0004139!3.34e-07!24;UBERON:0004291!3.34e-07!24;UBERON:0000486!5.96e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.19e-65;18!UBERON:0001986;8.19e-65;18!UBERON:0004852;8.19e-65;18!UBERON:0000487;3.79e-52;22!UBERON:0006914;2.61e-45;25!UBERON:0000490;8.06e-34;33!UBERON:0003915;1.39e-33;9!UBERON:0004700;1.39e-33;9!UBERON:0001917;1.39e-33;9!UBERON:0007500;1.72e-28;56!UBERON:0001981;1.72e-28;56!UBERON:0004537;1.72e-28;56!UBERON:0000055;1.79e-28;65!UBERON:0001637;4.80e-23;42!UBERON:0003509;4.80e-23;42!UBERON:0004572;4.80e-23;42!UBERON:0003914;7.76e-21;74!UBERON:0002049;3.32e-19;75!UBERON:0007798;3.32e-19;75!UBERON:0004573;1.08e-16;33!UBERON:0004571;1.08e-16;33!UBERON:0000947;1.40e-15;21!UBERON:0010191;1.40e-15;21!UBERON:0001638;1.32e-14;9!UBERON:0003920;1.32e-14;9!UBERON:0004582;1.32e-14;9!UBERON:0004535;5.79e-13;109!UBERON:0010523;4.09e-12;3!UBERON:0001915;4.09e-12;3!UBERON:0001982;4.09e-12;3!UBERON:0000025;1.10e-11;93!UBERON:0001009;1.47e-11;112!UBERON:0004111;2.01e-09;130!UBERON:0005800;7.91e-09;2!UBERON:0001515;7.91e-09;2!UBERON:0000074;1.56e-08;7!UBERON:0001229;1.56e-08;7!UBERON:0001473;1.56e-07;8!UBERON:0004536;1.56e-07;8!UBERON:0006558;1.56e-07;8!UBERON:0000119;1.97e-07;139!UBERON:0002066;2.03e-07;5!UBERON:0010260;7.99e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.18e-65,18;UBERON:0001986,6.18e-65,18;UBERON:0004852,6.18e-65,18;UBERON:0000487,3.01e-52,22;UBERON:0000055,2.49e-51,68;UBERON:0002049,1.26e-46,78;UBERON:0007798,1.26e-46,78;UBERON:0007500,1.12e-45,59;UBERON:0001981,1.12e-45,59;UBERON:0004537,1.12e-45,59;UBERON:0006965,1.12e-45,59;UBERON:0006914,2.14e-45,25;UBERON:0004872,4.13e-40,83;UBERON:0004535,1.21e-39,109;UBERON:0001009,2.50e-38,112;UBERON:0003914,5.64e-34,117;UBERON:0003915,1.56e-33,9;UBERON:0004700,1.56e-33,9;UBERON:0001917,1.56e-33,9;UBERON:0001637,7.02e-27,42;UBERON:0003509,7.02e-27,42;UBERON:0004572,7.02e-27,42;UBERON:0004573,1.73e-18,33;UBERON:0004571,1.73e-18,33;UBERON:0000025,3.33e-18,192;UBERON:0004111,5.51e-17,240;UBERON:0000490,3.79e-16,148;UBERON:0000947,1.23e-15,21;UBERON:0010191,1.23e-15,21;UBERON:0003081,1.29e-15,203;UBERON:0001638,1.17e-14,9;UBERON:0003920,1.17e-14,9;UBERON:0004582,1.17e-14,9;UBERON:0010523,3.29e-12,3;UBERON:0001915,3.29e-12,3;UBERON:0001982,3.29e-12,3;UBERON:0000483,4.64e-11,306;UBERON:0000119,7.36e-11,309;UBERON:0000926,5.20e-09,315;UBERON:0004120,5.20e-09,315;UBERON:0006603,5.20e-09,315;UBERON:0005800,7.63e-09,2;UBERON:0001515,7.63e-09,2;UBERON:0010532,2.23e-08,7;UBERON:0000074,2.23e-08,7;UBERON:0001229,2.23e-08,7;UBERON:0001230,2.23e-08,7;UBERON:0003220,2.23e-08,7;UBERON:0005749,2.23e-08,7;UBERON:0004199,2.23e-08,7;UBERON:0004209,2.23e-08,7;UBERON:0004198,2.23e-08,7;UBERON:0001473,1.56e-07,8;UBERON:0004536,1.56e-07,8;UBERON:0006558,1.56e-07,8;UBERON:0002066,2.31e-07,5;UBERON:0005103,2.48e-07,8;UBERON:0000083,2.48e-07,8;UBERON:0009201,2.48e-07,8;UBERON:0006553,2.48e-07,8;UBERON:0003074,2.48e-07,8;UBERON:0003060,2.48e-07,8;UBERON:0003498,4.57e-07,5;UBERON:0005985,4.57e-07,5;UBERON:0010260,8.18e-07,9 | |||
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| ||
|short_description=p2@ENST00000503066 | |||
}} | }} |
Latest revision as of 01:59, 30 July 2015
Short description: | p2@ENST00000503066 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000503066_5end |
Coexpression cluster: | C606_Endothelial_extraskeletal_Smooth_mesothelioma_Lymphatic_Fibroblast_lung |
Association with transcript: | 85bp_to_ENST00000503066_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.65e-71 | 24 |
endothelial cell | 1.32e-69 | 36 |
blood vessel endothelial cell | 6.18e-65 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.18e-65 | 18 |
meso-epithelial cell | 3.13e-54 | 45 |
lining cell | 1.43e-43 | 58 |
barrier cell | 1.43e-43 | 58 |
endothelial cell of artery | 1.56e-33 | 9 |
mesodermal cell | 8.63e-31 | 121 |
aortic endothelial cell | 3.58e-23 | 6 |
vein endothelial cell | 2.45e-22 | 6 |
squamous epithelial cell | 5.75e-17 | 63 |
capillary endothelial cell | 3.29e-12 | 3 |
endothelial cell of umbilical vein | 5.12e-12 | 3 |
embryonic cell | 6.87e-12 | 250 |
glomerular endothelial cell | 1.04e-11 | 5 |
lymphangioblast | 4.83e-10 | 6 |
endothelial cell of lymphatic vessel | 4.83e-10 | 6 |
vascular lymphangioblast | 4.83e-10 | 6 |
thoracic aorta endothelial cell | 7.63e-09 | 2 |
glomerular cell | 2.23e-08 | 7 |
kidney corpuscule cell | 2.23e-08 | 7 |
cardiocyte | 2.78e-07 | 16 |