FFCP PHASE1:Hg19::chr5:150592248..150592272,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:150592248..150592272,+ | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_at_chr5:150592248..150592272,+ | |||
|id=chr5:150592248..150592272,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.14e-53!52;CL:0000542!7.41e-52!53;CL:0000051!7.41e-52!53;CL:0000945!1.67e-27!24;CL:0000826!1.67e-27!24;CL:0002087!2.56e-24!119;CL:0000738!6.10e-24!140;CL:0002031!1.67e-21!124;CL:0000084!1.66e-19!25;CL:0000827!1.66e-19!25;CL:0000037!9.46e-18!172;CL:0000566!9.46e-18!172;CL:0000988!2.88e-16!182;CL:0002032!3.45e-15!165;CL:0000837!3.45e-15!165;CL:0000791!3.61e-10!18;CL:0000789!3.61e-10!18;CL:0002420!3.61e-10!18;CL:0002419!3.61e-10!18;CL:0000790!3.61e-10!18;CL:0000623!5.19e-10!3;CL:0000825!5.19e-10!3;CL:0000625!5.92e-10!11;CL:0000236!1.11e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.95e-15;1!CL:0000911;2.95e-15;1!CL:0000814;2.95e-15;1!CL:0000945;6.88e-15;24!CL:0000542;1.14e-10;53!CL:0000084;2.24e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.63e-21,52;CL:0000542,6.87e-21,53;CL:0000051,6.87e-21,53;CL:0002127,3.17e-15,1;CL:0000914,3.17e-15,1;CL:0000911,3.17e-15,1;CL:0000814,3.17e-15,1;CL:0002042,3.17e-15,1;CL:0002039,3.17e-15,1;CL:0002040,3.17e-15,1;CL:0002041,3.17e-15,1;CL:0000945,6.22e-15,24;CL:0000826,6.22e-15,24;CL:0000738,2.17e-09,136;CL:0000084,2.26e-09,25;CL:0000827,2.26e-09,25;CL:0002087,4.57e-09,115;CL:0002031,1.19e-08,120;CL:0000893,2.87e-08,2;CL:0002489,2.87e-08,2;CL:0000809,2.87e-08,2;CL:0000808,2.87e-08,2;CL:0000894,2.87e-08,2;CL:0000806,2.87e-08,2;CL:0000807,2.87e-08,2;CL:0000805,2.87e-08,2;CL:0002425,2.87e-08,2;CL:0000037,2.14e-07,168;CL:0000988,5.80e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.95e-15;1!CL:0000051;1.14e-10;53!CL:0002425;2.77e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.26e-15!10;DOID:2531!5.65e-07!51;DOID:0060083!5.65e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:2531;7.70e-07;51!DOID:0060083;7.70e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.28e-10,51;DOID:0060083,8.28e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.65e-12!7;UBERON:0002370!1.20e-08!4;UBERON:0005058!1.20e-08!4;UBERON:0009113!1.20e-08!4;UBERON:0003295!1.20e-08!4;UBERON:0005562!1.20e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.96e-29;2!UBERON:0005058;2.96e-29;2!UBERON:0009113;2.96e-29;2!UBERON:0001154;2.95e-15;1!UBERON:0001153;2.95e-15;1!UBERON:0009854;2.95e-15;1!UBERON:0004177;2.52e-12;5!UBERON:0005057;2.52e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.30e-32,4;UBERON:0005058,4.30e-32,4;UBERON:0009113,4.30e-32,4;UBERON:0003295,4.30e-32,4;UBERON:0005562,4.30e-32,4;UBERON:0003351,1.18e-21,6;UBERON:0004177,1.16e-18,7;UBERON:0005057,1.16e-18,7;UBERON:0001154,3.66e-15,1;UBERON:0001153,3.66e-15,1;UBERON:0001045,3.66e-15,1;UBERON:0000974,2.90e-13,10;UBERON:0003408,2.90e-13,10;UBERON:0001042,2.90e-13,10;UBERON:0009145,2.90e-13,10;UBERON:0006562,4.10e-12,11;UBERON:0009722,4.10e-12,11;UBERON:0007690,4.10e-12,11;UBERON:0008814,1.28e-07,18;UBERON:0001557,3.02e-07,19 | |||
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| ||
|short_description=p@chr5:150592248..150592272,+ | |||
}} | }} |
Latest revision as of 11:51, 30 July 2015
Short description: | p@chr5:150592248..150592272, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150592248..150592272, + |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.63e-21 | 52 |
lymphocyte | 6.87e-21 | 53 |
common lymphoid progenitor | 6.87e-21 | 53 |
innate effector T cell | 3.17e-15 | 1 |
immature NK T cell | 3.17e-15 | 1 |
effector T cell | 3.17e-15 | 1 |
mature NK T cell | 3.17e-15 | 1 |
immature NK T cell stage IV | 3.17e-15 | 1 |
immature NK T cell stage I | 3.17e-15 | 1 |
immature NK T cell stage II | 3.17e-15 | 1 |
immature NK T cell stage III | 3.17e-15 | 1 |
lymphocyte of B lineage | 6.22e-15 | 24 |
pro-B cell | 6.22e-15 | 24 |
leukocyte | 2.17e-09 | 136 |
T cell | 2.26e-09 | 25 |
pro-T cell | 2.26e-09 | 25 |
nongranular leukocyte | 4.57e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.19e-08 | 120 |
thymocyte | 2.87e-08 | 2 |
double negative thymocyte | 2.87e-08 | 2 |
double-positive, alpha-beta thymocyte | 2.87e-08 | 2 |
DN4 thymocyte | 2.87e-08 | 2 |
DN1 thymic pro-T cell | 2.87e-08 | 2 |
DN2 thymocyte | 2.87e-08 | 2 |
DN3 thymocyte | 2.87e-08 | 2 |
immature single positive thymocyte | 2.87e-08 | 2 |
early T lineage precursor | 2.87e-08 | 2 |
hematopoietic stem cell | 2.14e-07 | 168 |
hematopoietic cell | 5.80e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.30e-32 | 4 |
hemolymphoid system gland | 4.30e-32 | 4 |
thymic region | 4.30e-32 | 4 |
pharyngeal gland | 4.30e-32 | 4 |
thymus primordium | 4.30e-32 | 4 |
pharyngeal epithelium | 1.18e-21 | 6 |
hemopoietic organ | 1.16e-18 | 7 |
immune organ | 1.16e-18 | 7 |
vermiform appendix | 3.66e-15 | 1 |
caecum | 3.66e-15 | 1 |
midgut | 3.66e-15 | 1 |
neck | 2.90e-13 | 10 |
gland of gut | 2.90e-13 | 10 |
chordate pharynx | 2.90e-13 | 10 |
pharyngeal region of foregut | 2.90e-13 | 10 |
pharynx | 4.10e-12 | 11 |
entire pharyngeal arch endoderm | 4.10e-12 | 11 |
early pharyngeal endoderm | 4.10e-12 | 11 |
pharyngeal arch system | 1.28e-07 | 18 |
upper respiratory tract | 3.02e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.28e-10 | 51 |
immune system cancer | 8.28e-10 | 51 |