FFCP PHASE1:Mm9::chr2:127481893..127481902,-: Difference between revisions
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{{FFCP|EntrezGene=17153|HGNC=|MCL_coexpression_id=3311|UniProt=O09198|association_with_transcript=52bp_to_ENSMUST00000028853_5end|description=CAGE_peak_4_at_Mal_5end|id=chr2:127481893..127481902,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.20e-09!21;UBERON:0001008!2.83e-08!17;UBERON:0006554!5.01e-08!16;UBERON:0000033!2.13e-07!63;UBERON:0000955!3.47e-07!50;UBERON:0006238!3.47e-07!50;UBERON:0001049!3.86e-07!52;UBERON:0005068!3.86e-07!52;UBERON:0006241!3.86e-07!52;UBERON:0007135!3.86e-07!52;UBERON:0002113!5.77e-07!14;UBERON:0003918!5.77e-07!14;UBERON:0005095!5.77e-07!14;UBERON:0007687!5.77e-07!14;UBERON:0002616!9.97e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.41e-15,21;UBERON:0000073,1.24e-13,54;UBERON:0001016,5.05e-13,75;UBERON:0001049,6.30e-12,52;UBERON:0005068,6.30e-12,52;UBERON:0006241,6.30e-12,52;UBERON:0007135,6.30e-12,52;UBERON:0001017,2.06e-11,73;UBERON:0003076,5.51e-10,12;UBERON:0003057,5.51e-10,12;UBERON:0004121,1.36e-09,95;UBERON:0000924,1.36e-09,95;UBERON:0006601,1.36e-09,95;UBERON:0000955,5.14e-09,47;UBERON:0006238,5.14e-09,47;UBERON:0002113,1.14e-08,14;UBERON:0003918,1.14e-08,14;UBERON:0011143,1.14e-08,14;UBERON:0005095,1.14e-08,14;UBERON:0007687,1.14e-08,14;UBERON:0002346,1.45e-08,64;UBERON:0003075,1.45e-08,64;UBERON:0007284,1.45e-08,64;UBERON:0010371,1.59e-08,73;UBERON:0002616,3.38e-08,46;UBERON:0006554,6.36e-08,18;UBERON:0002950,9.85e-08,4;UBERON:0001891,9.85e-08,4;UBERON:0009616,9.85e-08,4;UBERON:0010286,9.85e-08,4;UBERON:0001008,2.17e-07,19;UBERON:0002020,2.48e-07,34;UBERON:0003103,4.77e-07,43|phase1_expression=1.44133962394315,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.319984845586813,0.91763712426868,1.72269589234506,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,1.71390590642282,1.32521124570968,0,0,0,1.10115880999389,2.80912143787413,3.5329502648936,0,0,0,1.95428099300967,2.8138130501584,3.36156145108982,1.17851434189467,1.28134512719193,0,1.8931548333296,1.51143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,4.08445917352373,0,0,0,0.649473123033642,1.52015919285059,1.01104889002957,0.68510327831436,0,0.890652834388949,0,0.913396434936424,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,3.72783522436244,2.92780797011547,1.67557365450764,0,0,0,0,5.09288173976397,5.49000723382352,0.125654352112864,2.08589184230732,1.53429274398198,4.57133698031032,8.27430441645564,0.101839363850316,0.746441823660558,3.0326731012041,0,0,0,0,0.150704817835715,0.272145996605311,0.12811372028485,0,0.776110112217047,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0.438599962275997,0.439100230582101,0,3.15434922846191,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,1.83286195060783,1.55161989734101,1.82353131714828,2.65593455921881,5.46157547524528,5.33795674660674,5.18268088471562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.585400943573396,0,0,0.318909537314974,0.81931657357869,0.345369963731791,0.289298117163023,0,0,0,0,5.9403718295483,11.1351102262593,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0,0,1.92792789853084,0.425820255624806,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.535106452806212,0.493647061806363,0.304464949114599,0,0.21183207086382,0.661585194164886,0,0,0.0603129249281559,0.119372344003136,0,0,6.86073617438886,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,2.86401185404534,0,0.203319467126849,1.40406943068342,0.836353184057875,1.09181281873089,1.21377911746339,1.40510874733071,1.83229159388821,1.94422459937689,0.621339313086926,0,0.149516546043979,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,2.89784391048286,1.87682475451182,1.09890974560359,0.428736758158132,1.50471631210609,1.12950368523413,0.920650473014354,2.29158205375759,0.515559547031063,2.74033007908257,0,1.35004500046361,0.45032120322422,0.453142408984205,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0.505394423527595,0,0.377252682772152,0.280924522409647,0.192075457214608,0.229741875822453,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.355905054372522,0,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.57386499620653,1.54413993383661,0.231867835620421|short_description=p4@Mal}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17153 | |||
|HGNC= | |||
|MCL_coexpression_id=3311 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O09198 | |||
|association_with_transcript=52bp_to_ENSMUST00000028853_5end | |||
|cluster_id=chr2:127481893..127481902,- | |||
|description=CAGE_peak_4_at_Mal_5end | |||
|id=chr2:127481893..127481902,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.20e-09!21;UBERON:0001008!2.83e-08!17;UBERON:0006554!5.01e-08!16;UBERON:0000033!2.13e-07!63;UBERON:0000955!3.47e-07!50;UBERON:0006238!3.47e-07!50;UBERON:0001049!3.86e-07!52;UBERON:0005068!3.86e-07!52;UBERON:0006241!3.86e-07!52;UBERON:0007135!3.86e-07!52;UBERON:0002113!5.77e-07!14;UBERON:0003918!5.77e-07!14;UBERON:0005095!5.77e-07!14;UBERON:0007687!5.77e-07!14;UBERON:0002616!9.97e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.41e-15,21;UBERON:0000073,1.24e-13,54;UBERON:0001016,5.05e-13,75;UBERON:0001049,6.30e-12,52;UBERON:0005068,6.30e-12,52;UBERON:0006241,6.30e-12,52;UBERON:0007135,6.30e-12,52;UBERON:0001017,2.06e-11,73;UBERON:0003076,5.51e-10,12;UBERON:0003057,5.51e-10,12;UBERON:0004121,1.36e-09,95;UBERON:0000924,1.36e-09,95;UBERON:0006601,1.36e-09,95;UBERON:0000955,5.14e-09,47;UBERON:0006238,5.14e-09,47;UBERON:0002113,1.14e-08,14;UBERON:0003918,1.14e-08,14;UBERON:0011143,1.14e-08,14;UBERON:0005095,1.14e-08,14;UBERON:0007687,1.14e-08,14;UBERON:0002346,1.45e-08,64;UBERON:0003075,1.45e-08,64;UBERON:0007284,1.45e-08,64;UBERON:0010371,1.59e-08,73;UBERON:0002616,3.38e-08,46;UBERON:0006554,6.36e-08,18;UBERON:0002950,9.85e-08,4;UBERON:0001891,9.85e-08,4;UBERON:0009616,9.85e-08,4;UBERON:0010286,9.85e-08,4;UBERON:0001008,2.17e-07,19;UBERON:0002020,2.48e-07,34;UBERON:0003103,4.77e-07,43 | |||
|phase1_expression=1.44133962394315,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.319984845586813,0.91763712426868,1.72269589234506,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,1.71390590642282,1.32521124570968,0,0,0,1.10115880999389,2.80912143787413,3.5329502648936,0,0,0,1.95428099300967,2.8138130501584,3.36156145108982,1.17851434189467,1.28134512719193,0,1.8931548333296,1.51143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,4.08445917352373,0,0,0,0.649473123033642,1.52015919285059,1.01104889002957,0.68510327831436,0,0.890652834388949,0,0.913396434936424,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,3.72783522436244,2.92780797011547,1.67557365450764,0,0,0,0,5.09288173976397,5.49000723382352,0.125654352112864,2.08589184230732,1.53429274398198,4.57133698031032,8.27430441645564,0.101839363850316,0.746441823660558,3.0326731012041,0,0,0,0,0.150704817835715,0.272145996605311,0.12811372028485,0,0.776110112217047,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0.438599962275997,0.439100230582101,0,3.15434922846191,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,1.83286195060783,1.55161989734101,1.82353131714828,2.65593455921881,5.46157547524528,5.33795674660674,5.18268088471562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.585400943573396,0,0,0.318909537314974,0.81931657357869,0.345369963731791,0.289298117163023,0,0,0,0,5.9403718295483,11.1351102262593,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0,0,1.92792789853084,0.425820255624806,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.535106452806212,0.493647061806363,0.304464949114599,0,0.21183207086382,0.661585194164886,0,0,0.0603129249281559,0.119372344003136,0,0,6.86073617438886,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,2.86401185404534,0,0.203319467126849,1.40406943068342,0.836353184057875,1.09181281873089,1.21377911746339,1.40510874733071,1.83229159388821,1.94422459937689,0.621339313086926,0,0.149516546043979,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,2.89784391048286,1.87682475451182,1.09890974560359,0.428736758158132,1.50471631210609,1.12950368523413,0.920650473014354,2.29158205375759,0.515559547031063,2.74033007908257,0,1.35004500046361,0.45032120322422,0.453142408984205,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0.505394423527595,0,0.377252682772152,0.280924522409647,0.192075457214608,0.229741875822453,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.355905054372522,0,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.57386499620653,1.54413993383661,0.231867835620421 | |||
|short_description=p4@Mal | |||
}} |
Revision as of 23:55, 3 August 2015
Short description: | p4@Mal |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mal_5end |
Coexpression cluster: | MCL_coexpression_mm9:3311 |
Association with transcript: | 52bp_to_ENSMUST00000028853_5end |
EntrezGene: | 17153 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 8.41e-15 | 21 |
regional part of nervous system | 1.24e-13 | 54 |
nervous system | 5.05e-13 | 75 |
neural tube | 6.30e-12 | 52 |
neural rod | 6.30e-12 | 52 |
future spinal cord | 6.30e-12 | 52 |
neural keel | 6.30e-12 | 52 |
central nervous system | 2.06e-11 | 73 |
posterior neural tube | 5.51e-10 | 12 |
chordal neural plate | 5.51e-10 | 12 |
ectoderm-derived structure | 1.36e-09 | 95 |
ectoderm | 1.36e-09 | 95 |
presumptive ectoderm | 1.36e-09 | 95 |
brain | 5.14e-09 | 47 |
future brain | 5.14e-09 | 47 |
kidney | 1.14e-08 | 14 |
kidney mesenchyme | 1.14e-08 | 14 |
upper urinary tract | 1.14e-08 | 14 |
kidney rudiment | 1.14e-08 | 14 |
kidney field | 1.14e-08 | 14 |
neurectoderm | 1.45e-08 | 64 |
neural plate | 1.45e-08 | 64 |
presumptive neural plate | 1.45e-08 | 64 |
ecto-epithelium | 1.59e-08 | 73 |
regional part of brain | 3.38e-08 | 46 |
urinary system structure | 6.36e-08 | 18 |
regional part of midbrain | 9.85e-08 | 4 |
midbrain | 9.85e-08 | 4 |
presumptive midbrain | 9.85e-08 | 4 |
midbrain neural tube | 9.85e-08 | 4 |
renal system | 2.17e-07 | 19 |
gray matter | 2.48e-07 | 34 |
compound organ | 4.77e-07 | 43 |