FFCP PHASE1:Mm9::chr7:134160516..134160546,-: Difference between revisions
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{{FFCP|EntrezGene=67278|HGNC=|UniProt=Q99L02|association_with_transcript=319bp_to_NM_030240,uc009jtx.1_5end|description=CAGE_peak_7_at_2900092E17Rik_5end|id=chr7:134160516..134160546,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.29e-07!71;UBERON:0003075!1.29e-07!71;UBERON:0007284!1.29e-07!71;UBERON:0000033!1.35e-07!63;UBERON:0000073!2.04e-07!75;UBERON:0001016!2.04e-07!75;UBERON:0001017!3.50e-07!73;UBERON:0005743!3.50e-07!73;UBERON:0007811!3.85e-07!86;UBERON:0004121!4.86e-07!102;UBERON:0000924!4.86e-07!102;UBERON:0006601!4.86e-07!102;UBERON:0001049!7.17e-07!52;UBERON:0005068!7.17e-07!52;UBERON:0006241!7.17e-07!52;UBERON:0007135!7.17e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.39e-10,92;UBERON:0002346,1.90e-08,64;UBERON:0003075,1.90e-08,64;UBERON:0007284,1.90e-08,64;UBERON:0004121,1.43e-07,95;UBERON:0000924,1.43e-07,95;UBERON:0006601,1.43e-07,95;UBERON:0001016,2.24e-07,75;UBERON:0001017,3.86e-07,73;UBERON:0000073,4.04e-07,54;UBERON:0001049,8.98e-07,52;UBERON:0005068,8.98e-07,52;UBERON:0006241,8.98e-07,52;UBERON:0007135,8.98e-07,52|phase1_expression=2.5623815536767,4.18770489167233,2.27499619694768,0.90739263392049,0,0.839396359559449,1.63528848416868,2.1950964985068,0.703943610758334,0.936258105287974,1.88339765048055,0.717949430958028,0.856003649656029,2.36035086531293,0.999329285446988,1.21485160433896,0,2.20823515750766,2.87940310572051,2.12194825899015,2.21112554392781,3.3758923408301,3.6567970479451,1.75991665072747,2.06468352960453,1.14846392823004,0.86152399231815,1.939241094173,2.09025761402011,1.51218077855958,2.43903561720835,5.71527606113668,1.84519436275371,0,2.3108129580102,1.82858109894342,1.02084678131185,4.18531630736908,3.906676722619,5.75876118371178,4.70585190424811,8.19654581950135,4.36959317728038,1.1330713617802,1.01376931219515,1.83546752161682,3.9119567217402,1.96222640742402,1.97717564461025,0.194429899074283,1.1198913730029,0,0.335565212115473,0,1.00828139742739,2.31533492432352,1.14613375975503,2.57836046138721,3.43937983461316,2.11596391708813,1.90149421051854,1.35537812827653,0.889294796111139,2.2497492932035,2.96659908770092,3.5524005747305,4.49400165777607,7.68436610643109,2.38486108309499,1.08004750665353,2.10324961351382,3.42781181284564,4.41737081903227,2.44981598429908,3.1629005436018,0.919218786610021,2.20231761998777,3.57524546638526,4.30098293117482,3.16527090552465,2.56165402086747,5.73004707612436,8.37548997004143,3.93933827022176,4.12555268997387,2.94628585473668,2.56269025438385,3.54158947068071,2.49896437999507,2.56943304363071,1.73918693221007,0,1.3599426674155,1.07940638327563,0,0.896053774194671,1.26399978118577,2.21559419351475,1.29893002301434,3.18005617059306,1.97180787687353,2.56652954828636,0,0,1.5154372870785,2.02687892380079,2.02209778005913,2.05530983494308,2.07150306917737,0.445326417194474,3.64319186208885,2.74018930480927,2.07553947530453,1.80867168663147,1.52865319276416,1.38233250462643,1.48316980640624,0.722996784599558,0,1.7794353494215,3.3126227769059,2.42437626567611,0,6.44117753425404,7.54008144528438,2.04365644166873,1.07833612055328,0.599902730993408,2.1601938602421,3.74476598512057,0.915001205637253,1.7591609295801,3.30266208365325,2.55715457330331,4.1557608911912,3.56930778749067,1.73126918545538,1.49288364732112,0.505445516867349,0.631325567659422,4.55421550369463,3.21862946206862,3.42118046630164,2.86339153887859,2.78949646520444,2.94661556655154,3.09215691047105,3.10444044886819,3.66465587985832,2.08016688184601,0.527853372491847,2.41115305670332,1.11218899690239,0.348252166522167,1.4404749548556,1.99034266818493,3.51106593656617,1.28673953557358,2.84163499395593,2.89976081549703,3.28336483973535,3.96136535214233,2.3674473558521,3.73852040320067,2.93107514486019,3.95307706075693,3.75582761959467,1.98501082024188,2.96207729844265,1.97000956894914,2.51313309592153,1.90059983652932,3.07370161407471,2.68412837520744,1.68231958851302,1.64647379806855,2.97376904685418,1.32225283331772,2.77274725695804,0.696710015581316,1.9330119198314,1.81515172161008,1.77902435075896,1.90225626112559,3.79623249235609,3.12928013975621,3.2673577144035,2.18852119245266,1.75467678407208,1.79763881730844,1.94524244887225,2.38969527905241,5.31070122668629,2.51346727741403,2.25415471346161,1.4255592949172,1.55161989734101,1.61312385747733,2.08680572510049,2.50937251565324,2.511979645462,1.72756029490521,1.48226313543574,1.16791574001266,1.96558995113203,1.34917267430912,2.23146133527353,3.37648023653384,1.52775511068852,0,0.324270453550071,1.92192989231657,0,2.23284568601102,0,1.26289438973556,1.97337154874103,2.8946611281802,1.47802552133284,4.54779388249163,3.25929952884052,2.03694102930226,2.11221223459652,2.34508760418542,0.952174563544055,2.14647012643579,2.52216230569906,2.6575762757853,1.59454768657487,2.29408640602033,1.38147985492716,1.44649058581512,3.01582567878545,2.17562273527484,0.491764273019036,1.655620477828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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67278 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99L02 | |||
|association_with_transcript=319bp_to_NM_030240,uc009jtx.1_5end | |||
|cluster_id=chr7:134160516..134160546,- | |||
|description=CAGE_peak_7_at_2900092E17Rik_5end | |||
|id=chr7:134160516..134160546,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.29e-07!71;UBERON:0003075!1.29e-07!71;UBERON:0007284!1.29e-07!71;UBERON:0000033!1.35e-07!63;UBERON:0000073!2.04e-07!75;UBERON:0001016!2.04e-07!75;UBERON:0001017!3.50e-07!73;UBERON:0005743!3.50e-07!73;UBERON:0007811!3.85e-07!86;UBERON:0004121!4.86e-07!102;UBERON:0000924!4.86e-07!102;UBERON:0006601!4.86e-07!102;UBERON:0001049!7.17e-07!52;UBERON:0005068!7.17e-07!52;UBERON:0006241!7.17e-07!52;UBERON:0007135!7.17e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.39e-10,92;UBERON:0002346,1.90e-08,64;UBERON:0003075,1.90e-08,64;UBERON:0007284,1.90e-08,64;UBERON:0004121,1.43e-07,95;UBERON:0000924,1.43e-07,95;UBERON:0006601,1.43e-07,95;UBERON:0001016,2.24e-07,75;UBERON:0001017,3.86e-07,73;UBERON:0000073,4.04e-07,54;UBERON:0001049,8.98e-07,52;UBERON:0005068,8.98e-07,52;UBERON:0006241,8.98e-07,52;UBERON:0007135,8.98e-07,52 | |||
|phase1_expression=2.5623815536767,4.18770489167233,2.27499619694768,0.90739263392049,0,0.839396359559449,1.63528848416868,2.1950964985068,0.703943610758334,0.936258105287974,1.88339765048055,0.717949430958028,0.856003649656029,2.36035086531293,0.999329285446988,1.21485160433896,0,2.20823515750766,2.87940310572051,2.12194825899015,2.21112554392781,3.3758923408301,3.6567970479451,1.75991665072747,2.06468352960453,1.14846392823004,0.86152399231815,1.939241094173,2.09025761402011,1.51218077855958,2.43903561720835,5.71527606113668,1.84519436275371,0,2.3108129580102,1.82858109894342,1.02084678131185,4.18531630736908,3.906676722619,5.75876118371178,4.70585190424811,8.19654581950135,4.36959317728038,1.1330713617802,1.01376931219515,1.83546752161682,3.9119567217402,1.96222640742402,1.97717564461025,0.194429899074283,1.1198913730029,0,0.335565212115473,0,1.00828139742739,2.31533492432352,1.14613375975503,2.57836046138721,3.43937983461316,2.11596391708813,1.90149421051854,1.35537812827653,0.889294796111139,2.2497492932035,2.96659908770092,3.5524005747305,4.49400165777607,7.68436610643109,2.38486108309499,1.08004750665353,2.10324961351382,3.42781181284564,4.41737081903227,2.44981598429908,3.1629005436018,0.919218786610021,2.20231761998777,3.57524546638526,4.30098293117482,3.16527090552465,2.56165402086747,5.73004707612436,8.37548997004143,3.93933827022176,4.12555268997387,2.94628585473668,2.56269025438385,3.54158947068071,2.49896437999507,2.56943304363071,1.73918693221007,0,1.3599426674155,1.07940638327563,0,0.896053774194671,1.26399978118577,2.21559419351475,1.29893002301434,3.18005617059306,1.97180787687353,2.56652954828636,0,0,1.5154372870785,2.02687892380079,2.02209778005913,2.05530983494308,2.07150306917737,0.445326417194474,3.64319186208885,2.74018930480927,2.07553947530453,1.80867168663147,1.52865319276416,1.38233250462643,1.48316980640624,0.722996784599558,0,1.7794353494215,3.3126227769059,2.42437626567611,0,6.44117753425404,7.54008144528438,2.04365644166873,1.07833612055328,0.599902730993408,2.1601938602421,3.74476598512057,0.915001205637253,1.7591609295801,3.30266208365325,2.55715457330331,4.1557608911912,3.56930778749067,1.73126918545538,1.49288364732112,0.505445516867349,0.631325567659422,4.55421550369463,3.21862946206862,3.42118046630164,2.86339153887859,2.78949646520444,2.94661556655154,3.09215691047105,3.10444044886819,3.66465587985832,2.08016688184601,0.527853372491847,2.41115305670332,1.11218899690239,0.348252166522167,1.4404749548556,1.99034266818493,3.51106593656617,1.28673953557358,2.84163499395593,2.89976081549703,3.28336483973535,3.96136535214233,2.3674473558521,3.73852040320067,2.93107514486019,3.95307706075693,3.75582761959467,1.98501082024188,2.96207729844265,1.97000956894914,2.51313309592153,1.90059983652932,3.07370161407471,2.68412837520744,1.68231958851302,1.64647379806855,2.97376904685418,1.32225283331772,2.77274725695804,0.696710015581316,1.9330119198314,1.81515172161008,1.77902435075896,1.90225626112559,3.79623249235609,3.12928013975621,3.2673577144035,2.18852119245266,1.75467678407208,1.79763881730844,1.94524244887225,2.38969527905241,5.31070122668629,2.51346727741403,2.25415471346161,1.4255592949172,1.55161989734101,1.61312385747733,2.08680572510049,2.50937251565324,2.511979645462,1.72756029490521,1.48226313543574,1.16791574001266,1.96558995113203,1.34917267430912,2.23146133527353,3.37648023653384,1.52775511068852,0,0.324270453550071,1.92192989231657,0,2.23284568601102,0,1.26289438973556,1.97337154874103,2.8946611281802,1.47802552133284,4.54779388249163,3.25929952884052,2.03694102930226,2.11221223459652,2.34508760418542,0.952174563544055,2.14647012643579,2.52216230569906,2.6575762757853,1.59454768657487,2.29408640602033,1.38147985492716,1.44649058581512,3.01582567878545,2.17562273527484,0.491764273019036,1.65562047782839,4.97706828962155,5.62616095642575,3.60656879828686,2.7771801992481,1.57754109708128,2.34263246577983,3.01592756825919,3.10659437338318,1.78238939265915,1.69845918473299,3.23848561339915,2.04579100537918,1.97643888973262,0.642642632843614,1.56134093729095,2.67098405500883,0.651547837414304,0.989820737835213,1.32745138339963,3.15614827001476,1.51161778482376,1.32023555829129,2.06711325016541,2.76691633149535,1.80899805217755,2.90826983582004,2.49548164869305,2.84433082142234,3.16255825724996,1.03135543248187,2.38307724027652,3.96134406868882,2.97524972700335,3.42939256050548,2.6601035046341,1.60531935841864,1.97458824722545,3.04464949114599,1.40803024838226,2.1183207086382,1.32317038832977,1.31909002353184,2.26050197374268,0.904693873922338,1.07435109602823,2.29797259643086,0.874442509889552,4.07935664423121,1.70870880797853,3.50857675537478,2.77791791054568,2.0720530270516,3.14396723758358,1.60144721244566,0.679913719975421,1.25956307091292,0.829199842826543,0.954670618015114,2.21435195506795,1.42323626988794,1.83609079397062,1.46361807210128,2.18362563746178,1.21377911746339,2.31429676030941,1.30877970992015,2.33306951925227,3.72803587852155,0,2.24274819065968,2.316418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| |||
|short_description=p7@2900092E17Rik | |||
}} |
Revision as of 06:26, 4 August 2015
Short description: | p7@2900092E17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_2900092E17Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 319bp_to_NM_030240, uc009jtx.1_5end |
EntrezGene: | 67278 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.39e-10 | 92 |
neurectoderm | 1.90e-08 | 64 |
neural plate | 1.90e-08 | 64 |
presumptive neural plate | 1.90e-08 | 64 |
ectoderm-derived structure | 1.43e-07 | 95 |
ectoderm | 1.43e-07 | 95 |
presumptive ectoderm | 1.43e-07 | 95 |
nervous system | 2.24e-07 | 75 |
central nervous system | 3.86e-07 | 73 |
regional part of nervous system | 4.04e-07 | 54 |
neural tube | 8.98e-07 | 52 |
neural rod | 8.98e-07 | 52 |
future spinal cord | 8.98e-07 | 52 |
neural keel | 8.98e-07 | 52 |