FFCP PHASE1:Mm9::chr4:137439830..137439880,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=123 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000155349,ENSMUST00000156022_5end | |association_with_transcript=0bp_to_ENSMUST00000155349,ENSMUST00000156022_5end | ||
|cluster_id=chr4:137439830..137439880,- | |||
|description=CAGE_peak_1_at_ENSMUST00000155349_5end,CAGE_peak_1_at_ENSMUST00000156022_5end | |description=CAGE_peak_1_at_ENSMUST00000155349_5end,CAGE_peak_1_at_ENSMUST00000156022_5end | ||
|id=chr4:137439830..137439880,- | |id=chr4:137439830..137439880,- | ||
|ontology_enrichment_celltype=CL:0000988!1.57e-07!32;CL:0002032!1.57e-07!32;CL:0000037!1.57e-07!32;CL:0000566!1.57e-07!32;CL:0000837!1.57e-07!32 | |ontology_enrichment_celltype=CL:0000988!1.57e-07!32;CL:0002032!1.57e-07!32;CL:0000037!1.57e-07!32;CL:0000566!1.57e-07!32;CL:0000837!1.57e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.30e-12,32;CL:0002032,1.30e-12,32;CL:0000037,1.30e-12,32;CL:0000837,1.30e-12,32;CL:0000838,1.97e-08,12;CL:0002031,3.28e-08,25;CL:0002320,4.96e-08,46;CL:0000134,4.96e-08,46;CL:0000542,1.51e-07,13;CL:0000051,1.51e-07,13;CL:0000084,1.69e-07,11;CL:0000827,1.69e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.23e-14!48;UBERON:0002405!8.01e-14!70;UBERON:0002390!1.28e-13!45;UBERON:0003061!1.28e-13!45;UBERON:0004177!1.26e-11!29;UBERON:0005057!3.63e-10!51;UBERON:0003408!9.13e-09!24;UBERON:0002370!1.01e-08!23;UBERON:0000974!1.01e-08!23;UBERON:0004807!1.01e-08!23;UBERON:0005058!1.01e-08!23;UBERON:0003351!1.01e-08!23;UBERON:0009113!1.01e-08!23;UBERON:0003295!1.01e-08!23;UBERON:0009722!1.01e-08!23;UBERON:0005562!1.01e-08!23;UBERON:0007690!1.01e-08!23;UBERON:0003081!1.28e-08!88;UBERON:0001004!2.04e-08!42;UBERON:0006562!2.13e-08!24;UBERON:0001557!2.13e-08!24;UBERON:0001042!2.13e-08!24;UBERON:0008814!2.13e-08!24;UBERON:0009145!2.13e-08!24;UBERON:0001041!2.19e-08!92;UBERON:0000065!2.59e-08!41;UBERON:0000077!5.10e-08!97;UBERON:0000926!1.26e-07!193;UBERON:0004120!1.26e-07!193;UBERON:0006603!1.26e-07!193;UBERON:0003104!4.16e-07!131;UBERON:0009142!4.16e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.38e-23,45;UBERON:0003061,1.38e-23,45;UBERON:0002193,3.88e-23,48;UBERON:0002405,3.88e-23,48;UBERON:0004177,1.53e-18,29;UBERON:0005057,1.53e-18,29;UBERON:0000077,4.28e-15,35;UBERON:0002370,8.16e-14,23;UBERON:0000974,8.16e-14,23;UBERON:0004807,8.16e-14,23;UBERON:0005058,8.16e-14,23;UBERON:0003351,8.16e-14,23;UBERON:0009113,8.16e-14,23;UBERON:0003295,8.16e-14,23;UBERON:0009722,8.16e-14,23;UBERON:0005562,8.16e-14,23;UBERON:0007690,8.16e-14,23;UBERON:0006562,5.83e-13,24;UBERON:0003408,5.83e-13,24;UBERON:0001557,5.83e-13,24;UBERON:0001042,5.83e-13,24;UBERON:0008814,5.83e-13,24;UBERON:0009145,5.83e-13,24;UBERON:0003081,2.22e-11,87;UBERON:0001041,3.56e-11,80;UBERON:0000072,8.51e-11,27;UBERON:0000065,2.69e-10,41;UBERON:0001004,7.33e-10,42;UBERON:0005911,2.55e-09,69;UBERON:0003929,1.11e-08,55;UBERON:0000490,4.88e-08,66;UBERON:0002384,4.96e-08,46;UBERON:0004921,5.63e-08,114;UBERON:0004119,8.35e-08,118;UBERON:0000925,8.35e-08,118;UBERON:0006595,8.35e-08,118;UBERON:0001007,1.30e-07,116;UBERON:0001555,1.30e-07,116;UBERON:0007026,1.30e-07,116;UBERON:0001474,1.36e-07,22;UBERON:0004765,1.36e-07,22;UBERON:0001434,1.36e-07,22;UBERON:0002368,2.97e-07,60;UBERON:0002530,3.45e-07,65;UBERON:0000926,5.35e-07,120;UBERON:0004120,5.35e-07,120;UBERON:0006603,5.35e-07,120 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,7.618276083053,3.23814060948833,0.936258105287974,9.07455231595176,1.91453181588807,17.1200729931206,3.2345548895029,4.99664642723494,4.25198061518635,1.39912375625629,26.9720151381293,32.6332351981658,25.0389894560838,0.340173160604279,2.08510997521859,6.79119451761232,0.799962113967033,0.91763712426868,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,7.11503772252743,10.1573594788094,8.37637990358077,7.64700934440319,4.78131839470912,7.2826552954673,0,0,0,0,0,0,0,0,0,17.1138258178891,6.5282592781021,5.71359458542189,0.257259436035947,0,0,0.202316460859598,0,0,0,0,2.2497492932035,0,1.4209602298922,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0.186399445825301,0.302904773332736,0,0,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.91347103775248,40.9121856162531,0.445326417194474,0,0.608930956624282,0.230615497256059,0.753613202763113,0.352766121407114,0.125666591329675,0.247194967734374,0.86759614151947,6.19227386364912,1.29413479957927,10.8212344045593,11.1521308221101,0,0.292780797011547,0,0.766371165625774,13.6589241936749,22.7963037777495,18.1710424714483,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0.203678727700633,9.70374370758726,0.252722758433675,0.420883711772948,0.650602214813519,0,0.180062129805349,0.753524089178575,0.136072998302656,0.12811372028485,0,0,0.215567992932842,0.378212160335639,0.703804496655795,0,0,0.348252166522167,0.205782136407943,0.995171334092466,24.5774615559632,15.4408744268829,9.09323198065896,0,0.234526059981096,0.540186184383045,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.656669856316381,0.405344047729279,0.584799949701329,0.439100230582101,0.134206418760372,0,0,0.991256348951394,0,0.213288250535234,0,0.257734922644187,1.00841762311671,0.22237804384487,0.380451252225118,1.42358718463353,0.823494773620054,1.25667604400135,1.39269530428806,1.75467678407208,0,1.29682829924817,1.7922714592893,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,2.16898637430922,0.982794975566015,0.449724224769707,1.21716072833102,1.4470629585145,2.29163266603278,4.89083433666378,6.32327384422638,2.19649130550465,2.87536413054709,1.48856379067401,1.24815069245824,1.26289438973556,0.179397413521912,0,2.40179147216586,0.568474235311454,0.488894929326078,0.509235257325564,0.234690248288502,0.502518772325447,0.476087281772027,0.585400943573396,1.26108115284953,1.10732344824387,1.2756381492599,2.13022309130459,2.59027472798843,1.15719246865209,0,0,2.45882136509518,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0.659880491890142,1.32745138339963,0,0.906970670894253,0.754420319023592,0.885905678642318,0,1.29214146584111,0,0.356497378384721,0.632073515871632,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,2.3467170806371,0,0.220528398054962,0.16488625294148,0.484393280087717,0.180938774784468,0.238744688006273,0.164140899745061,1.1659233465194,0.18542530201051,7.68918963590337,3.714963623338,3.1483069652851,6.78126445216888,9.97867862363484,12.1252431799457,22.6071311891828,23.3718925380509,24.0467954419697,0,0.158167996790568,0.406638934253697,0.540026704109006,0,0.436725127492355,0.134864346384821,0.41326727862668,0,0.648074866458964,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0.576060012515731,21.4887562027161,3.44632865993279,6.36807934421929,8.31493267057888,7.34009452236674,10.530111803407,15.9859947861559,15.0643317718069,16.9623635912888,17.603772337305,23.2908487666102,21.8305652857045,20.4931222693902,29.9204869584816,0.226730383615211,0.443971906748129,0,0,0.772758376128762,1.31377732815827,0.73260649706906,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.243106717068294,0.838452650511929,0.919217542250071,0.222246727801615,1.03017528619447,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0.256100609619477,0.402048282689293,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.588795680537589,1.02860775715625,1.06485483695602,0.476872379894642,0.581385666529314,0.470546902076653,0.25384382367503,0.182927972872773,1.05227884575137,0.543216455383447,0.561142271657738,1.18635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,1.10295709559758,4.40548887678801 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,7.618276083053,3.23814060948833,0.936258105287974,9.07455231595176,1.91453181588807,17.1200729931206,3.2345548895029,4.99664642723494,4.25198061518635,1.39912375625629,26.9720151381293,32.6332351981658,25.0389894560838,0.340173160604279,2.08510997521859,6.79119451761232,0.799962113967033,0.91763712426868,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,7.11503772252743,10.1573594788094,8.37637990358077,7.64700934440319,4.78131839470912,7.2826552954673,0,0,0,0,0,0,0,0,0,17.1138258178891,6.5282592781021,5.71359458542189,0.257259436035947,0,0,0.202316460859598,0,0,0,0,2.2497492932035,0,1.4209602298922,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0.186399445825301,0.302904773332736,0,0,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.91347103775248,40.9121856162531,0.445326417194474,0,0.608930956624282,0.230615497256059,0.753613202763113,0.352766121407114,0.125666591329675,0.247194967734374,0.86759614151947,6.19227386364912,1.29413479957927,10.8212344045593,11.1521308221101,0,0.292780797011547,0,0.766371165625774,13.6589241936749,22.7963037777495,18.1710424714483,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0.203678727700633,9.70374370758726,0.252722758433675,0.420883711772948,0.650602214813519,0,0.180062129805349,0.753524089178575,0.136072998302656,0.12811372028485,0,0,0.215567992932842,0.378212160335639,0.703804496655795,0,0,0.348252166522167,0.205782136407943,0.995171334092466,24.5774615559632,15.4408744268829,9.09323198065896,0,0.234526059981096,0.540186184383045,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.656669856316381,0.405344047729279,0.584799949701329,0.439100230582101,0.134206418760372,0,0,0.991256348951394,0,0.213288250535234,0,0.257734922644187,1.00841762311671,0.22237804384487,0.380451252225118,1.42358718463353,0.823494773620054,1.25667604400135,1.39269530428806,1.75467678407208,0,1.29682829924817,1.7922714592893,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,2.16898637430922,0.982794975566015,0.449724224769707,1.21716072833102,1.4470629585145,2.29163266603278,4.89083433666378,6.32327384422638,2.19649130550465,2.87536413054709,1.48856379067401,1.24815069245824,1.26289438973556,0.179397413521912,0,2.40179147216586,0.568474235311454,0.488894929326078,0.509235257325564,0.234690248288502,0.502518772325447,0.476087281772027,0.585400943573396,1.26108115284953,1.10732344824387,1.2756381492599,2.13022309130459,2.59027472798843,1.15719246865209,0,0,2.45882136509518,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0.659880491890142,1.32745138339963,0,0.906970670894253,0.754420319023592,0.885905678642318,0,1.29214146584111,0,0.356497378384721,0.632073515871632,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,2.3467170806371,0,0.220528398054962,0.16488625294148,0.484393280087717,0.180938774784468,0.238744688006273,0.164140899745061,1.1659233465194,0.18542530201051,7.68918963590337,3.714963623338,3.1483069652851,6.78126445216888,9.97867862363484,12.1252431799457,22.6071311891828,23.3718925380509,24.0467954419697,0,0.158167996790568,0.406638934253697,0.540026704109006,0,0.436725127492355,0.134864346384821,0.41326727862668,0,0.648074866458964,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0.576060012515731,21.4887562027161,3.44632865993279,6.36807934421929,8.31493267057888,7.34009452236674,10.530111803407,15.9859947861559,15.0643317718069,16.9623635912888,17.603772337305,23.2908487666102,21.8305652857045,20.4931222693902,29.9204869584816,0.226730383615211,0.443971906748129,0,0,0.772758376128762,1.31377732815827,0.73260649706906,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.243106717068294,0.838452650511929,0.919217542250071,0.222246727801615,1.03017528619447,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0.256100609619477,0.402048282689293,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.588795680537589,1.02860775715625,1.06485483695602,0.476872379894642,0.581385666529314,0.470546902076653,0.25384382367503,0.182927972872773,1.05227884575137,0.543216455383447,0.561142271657738,1.18635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,1.10295709559758,4.40548887678801 | ||
|short_description=p1@ENSMUST00000155349,p1@ENSMUST00000156022 | |short_description=p1@ENSMUST00000155349,p1@ENSMUST00000156022 | ||
}} | }} |
Latest revision as of 00:34, 5 August 2015
Short description: | p1@ENSMUST00000155349, p1@ENSMUST00000156022 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000155349_5end, CAGE_peak_1_at_ENSMUST00000156022_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | 0bp_to_ENSMUST00000155349, ENSMUST00000156022_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.30e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.30e-12 | 32 |
hematopoietic stem cell | 1.30e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.30e-12 | 32 |
lymphoid lineage restricted progenitor cell | 1.97e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 3.28e-08 | 25 |
connective tissue cell | 4.96e-08 | 46 |
mesenchymal cell | 4.96e-08 | 46 |
lymphocyte | 1.51e-07 | 13 |
common lymphoid progenitor | 1.51e-07 | 13 |
T cell | 1.69e-07 | 11 |
pro-T cell | 1.69e-07 | 11 |