FFCP PHASE1:Mm9::chr2:6806301..6806314,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14007|HGNC=|MCL_coexpression_id=76|UniProt=Q9Z0H4,E9QA47,A3KGT2|association_with_transcript=-259bp_to_ENSMUST00000114924,ENSMUST00000170438,NM_001110228,NM_001160293,NM_010160,uc008igo.1,uc008igr.2,uc008igx.1,uc012bpa.1_5end|description=CAGE_peak_22_at_Celf2_5end|id=chr2:6806301..6806314,-|ontology_enrichment_celltype=CL:0000117!3.16e-10!23;CL:0000337!3.16e-10!23;CL:0002609!4.51e-10!6|ontology_enrichment_celltype_v019_2=CL:0002609,6.57e-19,6;CL:0002608,4.15e-10,3;CL:0000117,2.79e-07,23;CL:0000337,2.79e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.75e-17!34;UBERON:0002791!8.76e-16!29;UBERON:0003528!8.76e-16!29;UBERON:0001893!8.76e-16!29;UBERON:0001049!9.94e-14!52;UBERON:0005068!9.94e-14!52;UBERON:0006241!9.94e-14!52;UBERON:0007135!9.94e-14!52;UBERON:0000956!1.04e-13!21;UBERON:0001869!1.04e-13!21;UBERON:0000203!1.04e-13!21;UBERON:0002780!2.35e-13!39;UBERON:0001890!2.35e-13!39;UBERON:0006240!2.35e-13!39;UBERON:0003056!5.44e-13!49;UBERON:0000955!7.24e-13!50;UBERON:0006238!7.24e-13!50;UBERON:0003080!7.61e-13!40;UBERON:0002616!3.06e-12!49;UBERON:0000033!7.51e-12!63;UBERON:0002346!7.86e-11!71;UBERON:0003075!7.86e-11!71;UBERON:0007284!7.86e-11!71;UBERON:0001017!1.44e-10!73;UBERON:0005743!1.44e-10!73;UBERON:0000073!4.79e-10!75;UBERON:0001016!4.79e-10!75;UBERON:0002619!2.59e-09!17;UBERON:0004121!3.26e-07!102;UBERON:0000924!3.26e-07!102;UBERON:0006601!3.26e-07!102;UBERON:0002021!5.35e-07!10;UBERON:0000411!5.35e-07!10;UBERON:0001950!5.35e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.01e-12,21;UBERON:0001869,1.01e-12,21;UBERON:0000203,1.01e-12,21;UBERON:0003528,1.21e-10,29;UBERON:0002791,1.21e-10,29;UBERON:0001893,1.21e-10,29;UBERON:0002020,1.91e-10,34;UBERON:0002619,1.18e-07,17;UBERON:0002780,2.41e-07,39;UBERON:0001890,2.41e-07,39;UBERON:0006240,2.41e-07,39;UBERON:0001954,2.75e-07,7;UBERON:0003022,2.75e-07,7;UBERON:0002421,2.75e-07,7;UBERON:0000349,2.75e-07,7;UBERON:0002600,2.75e-07,7;UBERON:0003080,4.16e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,11.8206158031665,9.45041568321835,11.567872874326,0,0,6.24703075996266,3.25874601462004,2.75765635983006,0,0.127687338085188,0,0.791317726381163,0.457438218012048,0.52091337055676,0,0,0,0.883885756421003,0.854230084794618,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0,0.457500602818626,3.5183218591602,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0,0.520481771850815,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,0.572895513439397,1.54667864109319,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0,0.170733605754134,0.729320151204882,1.04806581313991,0.367687016900028,0.666740183404846,1.03017528619447,0,0.505394423527595,0.50695859978048,1.13175804831646,1.31098110457835,1.92075457214608,1.95280594449085,2.38146845641537,1.27472758539341,2.70072908649187,1.23625770240992,1.03039244094078,0.685738504770831,1.4198064492747,2.14592570952589,1.45346416632329,0.752875043322645,0.846146078916765,1.28049581010941,1.8414879800649,0.950628796921032,0.561142271657738,0.949080144993393,1.0835493061312,0.409231043169689,1.23949472948773,0.578719832943424,1.24905288968973,0.935726433781634,0.214871054048298,0,0,0|short_description=p22@Celf2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14007 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0H4,uniprot:E9QA47,uniprot:A3KGT2 | |||
|association_with_transcript=-259bp_to_ENSMUST00000114924,ENSMUST00000170438,NM_001110228,NM_001160293,NM_010160,uc008igo.1,uc008igr.2,uc008igx.1,uc012bpa.1_5end | |||
|cluster_id=chr2:6806301..6806314,- | |||
|description=CAGE_peak_22_at_Celf2_5end | |||
|id=chr2:6806301..6806314,- | |||
|ontology_enrichment_celltype=CL:0000117!3.16e-10!23;CL:0000337!3.16e-10!23;CL:0002609!4.51e-10!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,6.57e-19,6;CL:0002608,4.15e-10,3;CL:0000117,2.79e-07,23;CL:0000337,2.79e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.75e-17!34;UBERON:0002791!8.76e-16!29;UBERON:0003528!8.76e-16!29;UBERON:0001893!8.76e-16!29;UBERON:0001049!9.94e-14!52;UBERON:0005068!9.94e-14!52;UBERON:0006241!9.94e-14!52;UBERON:0007135!9.94e-14!52;UBERON:0000956!1.04e-13!21;UBERON:0001869!1.04e-13!21;UBERON:0000203!1.04e-13!21;UBERON:0002780!2.35e-13!39;UBERON:0001890!2.35e-13!39;UBERON:0006240!2.35e-13!39;UBERON:0003056!5.44e-13!49;UBERON:0000955!7.24e-13!50;UBERON:0006238!7.24e-13!50;UBERON:0003080!7.61e-13!40;UBERON:0002616!3.06e-12!49;UBERON:0000033!7.51e-12!63;UBERON:0002346!7.86e-11!71;UBERON:0003075!7.86e-11!71;UBERON:0007284!7.86e-11!71;UBERON:0001017!1.44e-10!73;UBERON:0005743!1.44e-10!73;UBERON:0000073!4.79e-10!75;UBERON:0001016!4.79e-10!75;UBERON:0002619!2.59e-09!17;UBERON:0004121!3.26e-07!102;UBERON:0000924!3.26e-07!102;UBERON:0006601!3.26e-07!102;UBERON:0002021!5.35e-07!10;UBERON:0000411!5.35e-07!10;UBERON:0001950!5.35e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.01e-12,21;UBERON:0001869,1.01e-12,21;UBERON:0000203,1.01e-12,21;UBERON:0003528,1.21e-10,29;UBERON:0002791,1.21e-10,29;UBERON:0001893,1.21e-10,29;UBERON:0002020,1.91e-10,34;UBERON:0002619,1.18e-07,17;UBERON:0002780,2.41e-07,39;UBERON:0001890,2.41e-07,39;UBERON:0006240,2.41e-07,39;UBERON:0001954,2.75e-07,7;UBERON:0003022,2.75e-07,7;UBERON:0002421,2.75e-07,7;UBERON:0000349,2.75e-07,7;UBERON:0002600,2.75e-07,7;UBERON:0003080,4.16e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,11.8206158031665,9.45041568321835,11.567872874326,0,0,6.24703075996266,3.25874601462004,2.75765635983006,0,0.127687338085188,0,0.791317726381163,0.457438218012048,0.52091337055676,0,0,0,0.883885756421003,0.854230084794618,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0,0.457500602818626,3.5183218591602,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0,0.520481771850815,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,0.572895513439397,1.54667864109319,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0,0.170733605754134,0.729320151204882,1.04806581313991,0.367687016900028,0.666740183404846,1.03017528619447,0,0.505394423527595,0.50695859978048,1.13175804831646,1.31098110457835,1.92075457214608,1.95280594449085,2.38146845641537,1.27472758539341,2.70072908649187,1.23625770240992,1.03039244094078,0.685738504770831,1.4198064492747,2.14592570952589,1.45346416632329,0.752875043322645,0.846146078916765,1.28049581010941,1.8414879800649,0.950628796921032,0.561142271657738,0.949080144993393,1.0835493061312,0.409231043169689,1.23949472948773,0.578719832943424,1.24905288968973,0.935726433781634,0.214871054048298,0,0,0 | |||
|short_description=p22@Celf2 | |||
}} |
Revision as of 08:51, 5 August 2015
Short description: | p22@Celf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_Celf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | -259bp_to_ENSMUST00000114924, ENSMUST00000170438, NM_001110228, NM_001160293, NM_010160, uc008igo.1, uc008igr.2, uc008igx.1, uc012bpa.1_5end |
EntrezGene: | 14007 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 6.57e-19 | 6 |
hippocampal neuron | 4.15e-10 | 3 |
CNS neuron (sensu Vertebrata) | 2.79e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.79e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.01e-12 | 21 |
cerebral hemisphere | 1.01e-12 | 21 |
pallium | 1.01e-12 | 21 |
brain grey matter | 1.21e-10 | 29 |
regional part of telencephalon | 1.21e-10 | 29 |
telencephalon | 1.21e-10 | 29 |
gray matter | 1.91e-10 | 34 |
regional part of cerebral cortex | 1.18e-07 | 17 |
regional part of forebrain | 2.41e-07 | 39 |
forebrain | 2.41e-07 | 39 |
future forebrain | 2.41e-07 | 39 |
Ammon's horn | 2.75e-07 | 7 |
lobe parts of cerebral cortex | 2.75e-07 | 7 |
hippocampal formation | 2.75e-07 | 7 |
limbic system | 2.75e-07 | 7 |
limbic lobe | 2.75e-07 | 7 |
anterior neural tube | 4.16e-07 | 40 |