FFCP PHASE1:Mm9::chr4:87679232..87679277,-: Difference between revisions
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{{FFCP|EntrezGene=70122|HGNC=|UniProt=A2AM29|association_with_transcript=0bp_to_ENSMUST00000078090_5end|description=CAGE_peak_1_at_Mllt3_5end|id=chr4:87679232..87679277,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!7.82e-14!94;UBERON:0007811!7.32e-13!86;UBERON:0000955!2.67e-09!50;UBERON:0006238!2.67e-09!50;UBERON:0000033!4.67e-09!63;UBERON:0002616!8.47e-09!49;UBERON:0003080!2.75e-08!40;UBERON:0001049!4.59e-08!52;UBERON:0005068!4.59e-08!52;UBERON:0006241!4.59e-08!52;UBERON:0007135!4.59e-08!52;UBERON:0001004!6.37e-08!42;UBERON:0002780!8.27e-08!39;UBERON:0001890!8.27e-08!39;UBERON:0006240!8.27e-08!39;UBERON:0003056!8.53e-08!49;UBERON:0000065!1.39e-07!41;UBERON:0002791!2.17e-07!29;UBERON:0003528!2.17e-07!29;UBERON:0001893!2.17e-07!29;UBERON:0000477!3.45e-07!154;UBERON:0002346!5.69e-07!71;UBERON:0003075!5.69e-07!71;UBERON:0007284!5.69e-07!71;UBERON:0000475!5.90e-07!200;UBERON:0000481!6.96e-07!230|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.51e-09,47;UBERON:0006238,2.51e-09,47;UBERON:0002616,8.11e-09,46;UBERON:0003080,2.75e-08,40;UBERON:0001049,4.59e-08,52;UBERON:0005068,4.59e-08,52;UBERON:0006241,4.59e-08,52;UBERON:0007135,4.59e-08,52;UBERON:0001004,6.25e-08,42;UBERON:0002780,8.26e-08,39;UBERON:0001890,8.26e-08,39;UBERON:0006240,8.26e-08,39;UBERON:0003056,8.53e-08,49;UBERON:0000073,1.00e-07,54;UBERON:0000065,1.36e-07,41;UBERON:0003528,2.17e-07,29;UBERON:0002791,2.17e-07,29;UBERON:0001893,2.17e-07,29;UBERON:0010314,5.14e-07,92;UBERON:0002346,6.98e-07,64;UBERON:0003075,6.98e-07,64;UBERON:0007284,6.98e-07,64|phase1_expression=11.2104192973356,3.14077866875425,3.18499467572675,6.95667686005709,6.51164448930251,9.56911849897772,7.00837921786577,31.6352142431862,14.36044965947,14.0438715793196,4.45166717386313,5.34473465268754,29.960127737961,34.443638553085,5.66286595086627,7.89653542820321,1.39912375625629,7.41336088591859,8.36398044995006,5.94145512517242,11.0556277196391,7.04965753526286,7.31359409589019,5.43974237497583,3.44113921600755,5.16808767703518,7.75371593086335,6.24866574789078,4.75058548640935,5.79669298447841,4.43461021310609,5.71527606113668,7.38077745101484,0,6.06588401477677,7.97926297720763,7.35009682544529,0,0,0,0.588231488031014,0,0.485510353031154,9.9458486200706,8.41428529121971,11.9305388905093,3.9119567217402,5.23260375313072,5.71184075109627,11.665793944457,8.11921245427103,4.31257693094915,5.36904339384756,35.5427449585559,25.5431287348273,8.7468208252222,9.45560351797897,8.76642556871652,10.5204559646991,12.1667925232568,12.0427966666174,3.72728985276045,8.89294796111139,0.449949858640699,0,0.7104801149461,3.29560121570245,1.53687322128622,21.4637497478549,19.3058491814318,15.7743721013537,4.57041575046086,5.74258206474195,12.6165523191403,11.9806838772795,17.4651569455904,9.91042928994498,10.5980490610706,12.2885226604995,13.58428763621,13.174220678747,17.1901412283731,7.81712397203867,10.1297269805702,12.9878510610289,9.42811473515737,10.3931326983345,12.6751623161204,6.13382165998791,8.91744409260069,6.08715426273523,1.72084775396277,0.679971333707751,3.2382191498269,1.94932925234301,1.34408066129201,7.72444310724635,8.01022516116871,5.19572009205738,6.36011234118612,9.29566570526091,11.5493829672886,0,7.11066703153331,5.41227602528035,6.08063677140237,9.0994400102661,6.62266502370548,26.6706020156587,13.8051189330287,6.93941307064543,14.3098774806706,10.1470818792666,10.399862198131,10.8181610564848,9.67632753238501,5.19109432242185,7.95296463059514,6.19227386364912,5.3383060482645,10.8212344045593,12.6067565815158,16.775258509631,38.9398460025358,36.6531736923546,9.70736809792647,1.91704199209472,1.19980546198682,3.04968544975355,21.5698520742945,20.5875271268382,21.4868942112998,23.1186345855728,19.9458056717658,15.9996794310861,15.5751612545047,10.4894544765826,9.20611582514688,5.55990068554084,10.7325346502102,10.2795149940536,7.58676944630461,9.90341713929421,11.3028613376786,10.0694018743965,9.48041530107888,10.4008914261299,16.298312356558,11.4251036254406,12.6701073712439,10.9089696981648,5.47989331068937,12.2340789659263,11.4923214952315,14.1989674121481,9.75267907410617,2.1066395619397,1.02939162845886,1.98914449576915,12.0132948070591,11.0227248191115,12.9644684251931,12.7842157216014,11.4123254413494,13.2669717083145,9.06882384526591,8.58474884478781,8.75740067753771,9.05079174524142,12.9692296622485,9.8903947645944,7.60239934611728,12.0752563410078,11.8101648509127,23.9730541363105,23.4622516224768,10.9038198384653,7.66906643324278,14.2903127858607,16.0243303583703,14.3042882067524,13.3111126251406,12.6755484991576,10.8428606884159,9.96511029243474,9.88193728344065,7.79139147280835,9.74886713001639,10.7230247915516,8.98819408654222,12.9682829924817,14.3381716743144,5.12103332573321,13.2528274627285,15.7790829942313,10.997171703647,10.2794818198842,11.7126819216832,13.7223285559638,8.41377843483732,7.69293766422737,6.16985819609003,4.74324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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70122 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AM29 | |||
|association_with_transcript=0bp_to_ENSMUST00000078090_5end | |||
|cluster_id=chr4:87679232..87679277,- | |||
|description=CAGE_peak_1_at_Mllt3_5end | |||
|id=chr4:87679232..87679277,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!7.82e-14!94;UBERON:0007811!7.32e-13!86;UBERON:0000955!2.67e-09!50;UBERON:0006238!2.67e-09!50;UBERON:0000033!4.67e-09!63;UBERON:0002616!8.47e-09!49;UBERON:0003080!2.75e-08!40;UBERON:0001049!4.59e-08!52;UBERON:0005068!4.59e-08!52;UBERON:0006241!4.59e-08!52;UBERON:0007135!4.59e-08!52;UBERON:0001004!6.37e-08!42;UBERON:0002780!8.27e-08!39;UBERON:0001890!8.27e-08!39;UBERON:0006240!8.27e-08!39;UBERON:0003056!8.53e-08!49;UBERON:0000065!1.39e-07!41;UBERON:0002791!2.17e-07!29;UBERON:0003528!2.17e-07!29;UBERON:0001893!2.17e-07!29;UBERON:0000477!3.45e-07!154;UBERON:0002346!5.69e-07!71;UBERON:0003075!5.69e-07!71;UBERON:0007284!5.69e-07!71;UBERON:0000475!5.90e-07!200;UBERON:0000481!6.96e-07!230 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.51e-09,47;UBERON:0006238,2.51e-09,47;UBERON:0002616,8.11e-09,46;UBERON:0003080,2.75e-08,40;UBERON:0001049,4.59e-08,52;UBERON:0005068,4.59e-08,52;UBERON:0006241,4.59e-08,52;UBERON:0007135,4.59e-08,52;UBERON:0001004,6.25e-08,42;UBERON:0002780,8.26e-08,39;UBERON:0001890,8.26e-08,39;UBERON:0006240,8.26e-08,39;UBERON:0003056,8.53e-08,49;UBERON:0000073,1.00e-07,54;UBERON:0000065,1.36e-07,41;UBERON:0003528,2.17e-07,29;UBERON:0002791,2.17e-07,29;UBERON:0001893,2.17e-07,29;UBERON:0010314,5.14e-07,92;UBERON:0002346,6.98e-07,64;UBERON:0003075,6.98e-07,64;UBERON:0007284,6.98e-07,64 | |||
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| |||
|short_description=p1@Mllt3 | |||
}} |
Revision as of 19:23, 5 August 2015
Short description: | p1@Mllt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mllt3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000078090_5end |
EntrezGene: | 70122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 2.51e-09 | 47 |
future brain | 2.51e-09 | 47 |
regional part of brain | 8.11e-09 | 46 |
anterior neural tube | 2.75e-08 | 40 |
neural tube | 4.59e-08 | 52 |
neural rod | 4.59e-08 | 52 |
future spinal cord | 4.59e-08 | 52 |
neural keel | 4.59e-08 | 52 |
respiratory system | 6.25e-08 | 42 |
regional part of forebrain | 8.26e-08 | 39 |
forebrain | 8.26e-08 | 39 |
future forebrain | 8.26e-08 | 39 |
pre-chordal neural plate | 8.53e-08 | 49 |
regional part of nervous system | 1.00e-07 | 54 |
respiratory tract | 1.36e-07 | 41 |
brain grey matter | 2.17e-07 | 29 |
regional part of telencephalon | 2.17e-07 | 29 |
telencephalon | 2.17e-07 | 29 |
structure with developmental contribution from neural crest | 5.14e-07 | 92 |
neurectoderm | 6.98e-07 | 64 |
neural plate | 6.98e-07 | 64 |
presumptive neural plate | 6.98e-07 | 64 |