FFCP PHASE1:Mm9::chr18:69679247..69679264,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=437|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:69679247..69679264,+|id=chr18:69679247..69679264,+|ontology_enrichment_celltype=CL:0002609!1.69e-08!6|ontology_enrichment_celltype_v019_2=CL:0002609,1.58e-15,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!1.41e-22!21;UBERON:0001869!1.41e-22!21;UBERON:0000203!1.41e-22!21;UBERON:0002791!8.18e-21!29;UBERON:0003528!8.18e-21!29;UBERON:0001893!8.18e-21!29;UBERON:0002020!8.17e-20!34;UBERON:0002780!1.23e-14!39;UBERON:0001890!1.23e-14!39;UBERON:0006240!1.23e-14!39;UBERON:0003080!3.46e-14!40;UBERON:0000955!3.89e-14!50;UBERON:0006238!3.89e-14!50;UBERON:0001049!2.33e-13!52;UBERON:0005068!2.33e-13!52;UBERON:0006241!2.33e-13!52;UBERON:0007135!2.33e-13!52;UBERON:0002619!2.39e-13!17;UBERON:0002616!1.39e-12!49;UBERON:0003056!5.52e-11!49;UBERON:0002021!9.22e-11!10;UBERON:0000411!9.22e-11!10;UBERON:0001950!9.22e-11!10;UBERON:0000033!1.87e-10!63;UBERON:0001017!9.24e-10!73;UBERON:0005743!9.24e-10!73;UBERON:0000073!2.14e-09!75;UBERON:0001016!2.14e-09!75;UBERON:0002346!8.42e-09!71;UBERON:0003075!8.42e-09!71;UBERON:0007284!8.42e-09!71|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0001954,1.79e-13,7;UBERON:0003022,1.79e-13,7;UBERON:0002421,1.79e-13,7;UBERON:0000349,1.79e-13,7;UBERON:0002600,1.79e-13,7;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14058573539325,1.08004750665353,0.630974884054146,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,3.91037527041281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr18:69679247..69679264,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=437 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:69679247..69679264,+ | |||
|description=CAGE_peak_at_chr18:69679247..69679264,+ | |||
|id=chr18:69679247..69679264,+ | |||
|ontology_enrichment_celltype=CL:0002609!1.69e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.58e-15,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.41e-22!21;UBERON:0001869!1.41e-22!21;UBERON:0000203!1.41e-22!21;UBERON:0002791!8.18e-21!29;UBERON:0003528!8.18e-21!29;UBERON:0001893!8.18e-21!29;UBERON:0002020!8.17e-20!34;UBERON:0002780!1.23e-14!39;UBERON:0001890!1.23e-14!39;UBERON:0006240!1.23e-14!39;UBERON:0003080!3.46e-14!40;UBERON:0000955!3.89e-14!50;UBERON:0006238!3.89e-14!50;UBERON:0001049!2.33e-13!52;UBERON:0005068!2.33e-13!52;UBERON:0006241!2.33e-13!52;UBERON:0007135!2.33e-13!52;UBERON:0002619!2.39e-13!17;UBERON:0002616!1.39e-12!49;UBERON:0003056!5.52e-11!49;UBERON:0002021!9.22e-11!10;UBERON:0000411!9.22e-11!10;UBERON:0001950!9.22e-11!10;UBERON:0000033!1.87e-10!63;UBERON:0001017!9.24e-10!73;UBERON:0005743!9.24e-10!73;UBERON:0000073!2.14e-09!75;UBERON:0001016!2.14e-09!75;UBERON:0002346!8.42e-09!71;UBERON:0003075!8.42e-09!71;UBERON:0007284!8.42e-09!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0001954,1.79e-13,7;UBERON:0003022,1.79e-13,7;UBERON:0002421,1.79e-13,7;UBERON:0000349,1.79e-13,7;UBERON:0002600,1.79e-13,7;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14058573539325,1.08004750665353,0.630974884054146,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,3.91037527041281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr18:69679247..69679264,+ | |||
}} |
Latest revision as of 02:15, 6 August 2015
Short description: | p@chr18:69679247..69679264, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:69679247..69679264, + |
Coexpression cluster: | MCL_coexpression_mm9:437 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.58e-15 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.25e-17 | 21 |
cerebral hemisphere | 2.25e-17 | 21 |
pallium | 2.25e-17 | 21 |
Ammon's horn | 1.79e-13 | 7 |
lobe parts of cerebral cortex | 1.79e-13 | 7 |
hippocampal formation | 1.79e-13 | 7 |
limbic system | 1.79e-13 | 7 |
limbic lobe | 1.79e-13 | 7 |
brain grey matter | 7.80e-13 | 29 |
regional part of telencephalon | 7.80e-13 | 29 |
telencephalon | 7.80e-13 | 29 |
gray matter | 4.50e-11 | 34 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |