FFCP PHASE1:Hg19::chr5:14440817..14440832,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7204 | |EntrezGene=7204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |HGNC=12303 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-95bp_to_ENST00000515710,uc003jfi.1_5end | |association_with_transcript=-95bp_to_ENST00000515710,uc003jfi.1_5end | ||
|cluster_id=chr5:14440817..14440832,+ | |||
|coexpression_cluster_id=C950 | |coexpression_cluster_id=C950 | ||
|description=CAGE_peak_24_at_TRIO_5end | |description=CAGE_peak_24_at_TRIO_5end | ||
|id=chr5:14440817..14440832,+ | |id=chr5:14440817..14440832,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.50e-16!180;CL:0000057!2.89e-13!75;CL:0000188!7.71e-11!9;CL:0000680!2.32e-10!57;CL:0000056!2.32e-10!57;CL:0000355!2.32e-10!57;CL:0002570!3.70e-10!8;CL:0002551!5.80e-10!6;CL:0000048!8.81e-10!430;CL:0000723!2.47e-09!436;CL:0000034!9.25e-09!444;CL:0000183!1.13e-08!59;CL:0002620!1.49e-08!23;CL:0000187!4.19e-08!54;CL:0002582!8.04e-07!3;CL:0000393!9.26e-07!60;CL:0000211!9.26e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.50e-16!180;CL:0000057!2.89e-13!75;CL:0000188!7.71e-11!9;CL:0000680!2.32e-10!57;CL:0000056!2.32e-10!57;CL:0000355!2.32e-10!57;CL:0002570!3.70e-10!8;CL:0002551!5.80e-10!6;CL:0000048!8.81e-10!430;CL:0000723!2.47e-09!436;CL:0000034!9.25e-09!444;CL:0000183!1.13e-08!59;CL:0002620!1.49e-08!23;CL:0000187!4.19e-08!54;CL:0002582!8.04e-07!3;CL:0000393!9.26e-07!60;CL:0000211!9.26e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002582;3.71e-25;3!CL:0002583;3.81e-17;2!CL:0002334;7.73e-17;12!CL:0002549;9.66e-17;2!CL:0000708;9.56e-12;3!CL:0002570;1.38e-09;8!CL:0002595;3.13e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,1.85e-25,3;CL:0002583,2.87e-17,2;CL:0002334,5.20e-17,12;CL:0002549,9.68e-17,2;CL:0000708,8.83e-12,3;CL:0002570,1.96e-09,8;CL:0002595,3.67e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.12e-09;1 | |||
|ontology_enrichment_disease=DOID:2394!2.95e-11!14 | |ontology_enrichment_disease=DOID:2394!2.95e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.94e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.63e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!4.19e-13!70;UBERON:0000992!8.39e-12!13;UBERON:0000914!1.98e-11!83;UBERON:0002329!1.98e-11!83;UBERON:0003077!1.98e-11!83;UBERON:0003059!1.98e-11!83;UBERON:0007282!1.98e-11!83;UBERON:0009618!1.98e-11!83;UBERON:0007285!1.98e-11!83;UBERON:0000486!5.95e-10!82;UBERON:0001134!3.00e-09!61;UBERON:0002036!3.00e-09!61;UBERON:0003082!3.00e-09!61;UBERON:0002118!4.30e-09!5;UBERON:0004532!4.30e-09!5;UBERON:0002385!9.44e-09!63;UBERON:0001015!9.44e-09!63;UBERON:0000383!9.44e-09!63;UBERON:0002119!7.03e-08!4;UBERON:0004531!7.03e-08!4 | |ontology_enrichment_uberon=UBERON:0004290!4.19e-13!70;UBERON:0000992!8.39e-12!13;UBERON:0000914!1.98e-11!83;UBERON:0002329!1.98e-11!83;UBERON:0003077!1.98e-11!83;UBERON:0003059!1.98e-11!83;UBERON:0007282!1.98e-11!83;UBERON:0009618!1.98e-11!83;UBERON:0007285!1.98e-11!83;UBERON:0000486!5.95e-10!82;UBERON:0001134!3.00e-09!61;UBERON:0002036!3.00e-09!61;UBERON:0003082!3.00e-09!61;UBERON:0002118!4.30e-09!5;UBERON:0004532!4.30e-09!5;UBERON:0002385!9.44e-09!63;UBERON:0001015!9.44e-09!63;UBERON:0000383!9.44e-09!63;UBERON:0002119!7.03e-08!4;UBERON:0004531!7.03e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;9.66e-17;2!UBERON:0005358;9.66e-17;2!UBERON:0001886;9.66e-17;2!UBERON:0004086;9.66e-17;2!UBERON:0005282;9.66e-17;2!UBERON:0005281;9.66e-17;2!UBERON:0003210;9.56e-12;3!UBERON:0000992;3.74e-10;13!UBERON:0000941;3.12e-09;1!UBERON:0001785;3.12e-09;1!UBERON:0002464;3.12e-09;1!UBERON:0004904;3.12e-09;1!UBERON:0001021;3.12e-09;1!UBERON:0002119;7.88e-09;4!UBERON:0002118;1.50e-07;5!UBERON:0002072;2.17e-07;5!UBERON:0003834;3.13e-07;5!UBERON:0005284;3.13e-07;5!UBERON:0001533;3.13e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,9.68e-17,2;UBERON:0005358,9.68e-17,2;UBERON:0001886,9.68e-17,2;UBERON:0004086,9.68e-17,2;UBERON:0005282,9.68e-17,2;UBERON:0005281,9.68e-17,2;UBERON:0003210,8.83e-12,3;UBERON:0000992,3.09e-10,13;UBERON:0000941,3.53e-09,1;UBERON:0001785,3.53e-09,1;UBERON:0002464,3.53e-09,1;UBERON:0004904,3.53e-09,1;UBERON:0001021,3.53e-09,1;UBERON:0003902,3.53e-09,1;UBERON:0005425,3.53e-09,1;UBERON:0002119,5.74e-09,4;UBERON:0002118,1.50e-07,5;UBERON:0002072,1.95e-07,5;UBERON:0005284,3.14e-07,5;UBERON:0003834,3.67e-07,5;UBERON:0001533,3.67e-07,5 | |||
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| ||
|short_description=p24@TRIO | |short_description=p24@TRIO | ||
}} | }} |
Latest revision as of 19:14, 15 September 2015
Short description: | p24@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_TRIO_5end |
Coexpression cluster: | C950_liposarcoma_extraskeletal_Fibroblast_Smooth_Preadipocyte_neuroblastoma_mesenchymal |
Association with transcript: | -95bp_to_ENST00000515710, uc003jfi.1_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 1.85e-25 | 3 |
subcutaneous preadipocyte | 2.87e-17 | 2 |
preadipocyte | 5.20e-17 | 12 |
fibroblast of choroid plexus | 9.68e-17 | 2 |
leptomeningeal cell | 8.83e-12 | 3 |
mesenchymal stem cell of adipose | 1.96e-09 | 8 |
smooth muscle cell of the subclavian artery | 3.67e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 9.68e-17 | 2 |
ventricle of nervous system | 9.68e-17 | 2 |
choroid plexus | 9.68e-17 | 2 |
brain ventricle | 9.68e-17 | 2 |
ventricular system of brain | 9.68e-17 | 2 |
ventricular system of central nervous system | 9.68e-17 | 2 |
blood-cerebrospinal fluid barrier | 8.83e-12 | 3 |
female gonad | 3.09e-10 | 13 |
cranial nerve II | 3.53e-09 | 1 |
cranial nerve | 3.53e-09 | 1 |
nerve trunk | 3.53e-09 | 1 |
nerve connecting eye with brain | 3.53e-09 | 1 |
nerve | 3.53e-09 | 1 |
retinal neural layer | 3.53e-09 | 1 |
presumptive neural retina | 3.53e-09 | 1 |
left ovary | 5.74e-09 | 4 |
right ovary | 1.50e-07 | 5 |
hypodermis | 1.95e-07 | 5 |
brain vasculature | 3.14e-07 | 5 |
thoracic segment blood vessel | 3.67e-07 | 5 |
subclavian artery | 3.67e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.63e-09 | 14 |