FFCP PHASE1:Hg19::chr17:47866494..47866507,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81558 | |EntrezGene=81558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24179 | |HGNC=24179 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000509347_5end | |association_with_transcript=19bp_to_ENST00000509347_5end | ||
|cluster_id=chr17:47866494..47866507,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_12_at_FAM117A_5end | |description=CAGE_peak_12_at_FAM117A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.70e-40;1!CL:0002625;2.70e-40;1!CL:0000216;2.70e-40;1!CL:0002577;1.96e-14;3!CL:0000154;7.01e-08;6 | |ontology_enrichment_celltype_v019=CL:0000511;2.70e-40;1!CL:0002625;2.70e-40;1!CL:0000216;2.70e-40;1!CL:0002577;1.96e-14;3!CL:0000154;7.01e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.30e-40,1;CL:0002625,3.30e-40,1;CL:0000216,3.30e-40,1;CL:0002577,1.83e-14,3;CL:0000154,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!1.33e-07!9;UBERON:0007245!1.33e-07!9;UBERON:0010009!1.33e-07!9;UBERON:0010011!1.33e-07!9;UBERON:0000454!1.33e-07!9 | |ontology_enrichment_uberon=UBERON:0002420!1.33e-07!9;UBERON:0007245!1.33e-07!9;UBERON:0010009!1.33e-07!9;UBERON:0010011!1.33e-07!9;UBERON:0000454!1.33e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.68e-45;8!UBERON:0001136;2.70e-40;1!UBERON:0001343;2.70e-40;1!UBERON:0004910;2.70e-40;1!UBERON:0004813;2.70e-40;1!UBERON:0003135;4.54e-33;11!UBERON:0004909;6.30e-21;2!UBERON:0000991;8.53e-18;21!UBERON:0003101;4.99e-17;22!UBERON:0000079;4.99e-17;22!UBERON:0001987;3.60e-11;4!UBERON:0005904;3.60e-11;4!UBERON:0002323;8.40e-07;45 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.68e-45;8!UBERON:0001136;2.70e-40;1!UBERON:0001343;2.70e-40;1!UBERON:0004910;2.70e-40;1!UBERON:0004813;2.70e-40;1!UBERON:0003135;4.54e-33;11!UBERON:0004909;6.30e-21;2!UBERON:0000991;8.53e-18;21!UBERON:0003101;4.99e-17;22!UBERON:0000079;4.99e-17;22!UBERON:0001987;3.60e-11;4!UBERON:0005904;3.60e-11;4!UBERON:0002323;8.40e-07;45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.04e-45,8;UBERON:0001136,3.30e-40,1;UBERON:0001343,3.30e-40,1;UBERON:0004910,3.30e-40,1;UBERON:0005154,3.30e-40,1;UBERON:0005295,3.30e-40,1;UBERON:0004813,3.30e-40,1;UBERON:0005297,3.30e-40,1;UBERON:0005294,3.30e-40,1;UBERON:0010141,3.30e-40,1;UBERON:0005891,3.30e-40,1;UBERON:0003135,4.79e-33,11;UBERON:0004909,6.96e-21,2;UBERON:0000991,8.78e-18,21;UBERON:0009196,8.78e-18,21;UBERON:0009117,8.78e-18,21;UBERON:0005564,8.78e-18,21;UBERON:0004176,5.13e-17,22;UBERON:0003101,5.13e-17,22;UBERON:0000079,5.13e-17,22;UBERON:0003133,7.05e-14,48;UBERON:0005156,2.01e-11,59;UBERON:0000990,2.01e-11,59;UBERON:0001987,3.42e-11,4;UBERON:0004340,3.42e-11,4;UBERON:0005904,3.79e-11,4;UBERON:0002323,1.43e-08,46;UBERON:0004458,4.32e-08,49;UBERON:0003886,2.08e-07,54;UBERON:0003124,6.04e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0.164201178899891,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.637130828648193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0.250707539292375,4.69827928953084,8.03892390468535,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0.164201178899891,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.637130828648193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0.250707539292375,4.69827928953084,8.03892390468535,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p12@FAM117A | |short_description=p12@FAM117A | ||
}} | }} |
Latest revision as of 21:45, 15 September 2015
Short description: | p12@FAM117A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FAM117A_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 19bp_to_ENST00000509347_5end |
EntrezGene: | FAM117A |
HGNC: | 24179 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.30e-40 | 1 |
seminiferous tubule epithelial cell | 3.30e-40 | 1 |
Sertoli cell | 3.30e-40 | 1 |
placental epithelial cell | 1.83e-14 | 3 |
protein secreting cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 5.04e-45 | 8 |
mesothelium | 3.30e-40 | 1 |
seminiferous tubule of testis | 3.30e-40 | 1 |
epithelium of male gonad | 3.30e-40 | 1 |
epithelial cord | 3.30e-40 | 1 |
sex cord | 3.30e-40 | 1 |
seminiferous tubule epithelium | 3.30e-40 | 1 |
testis sex cord | 3.30e-40 | 1 |
genital ridge | 3.30e-40 | 1 |
primitive sex cord of indifferent gonad | 3.30e-40 | 1 |
coelomic epithelium | 3.30e-40 | 1 |
male reproductive organ | 4.79e-33 | 11 |
epithelium of gonad | 6.96e-21 | 2 |
gonad | 8.78e-18 | 21 |
indifferent external genitalia | 8.78e-18 | 21 |
indifferent gonad | 8.78e-18 | 21 |
gonad primordium | 8.78e-18 | 21 |
external genitalia | 5.13e-17 | 22 |
male organism | 5.13e-17 | 22 |
male reproductive system | 5.13e-17 | 22 |
reproductive organ | 7.05e-14 | 48 |
reproductive structure | 2.01e-11 | 59 |
reproductive system | 2.01e-11 | 59 |
placenta | 3.42e-11 | 4 |
allantois | 3.42e-11 | 4 |
duct of male reproductive system | 3.79e-11 | 4 |
body cavity | 1.43e-08 | 46 |
body cavity or lining | 4.32e-08 | 49 |
body cavity precursor | 2.08e-07 | 54 |
chorion | 6.04e-07 | 7 |