FFCP PHASE1:Hg19::chr3:149260147..149260154,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_ENST00000485244_5end | |association_with_transcript=71bp_to_ENST00000485244_5end | ||
|cluster_id=chr3:149260147..149260154,- | |||
|description=CAGE_peak_39_at_WWTR1_5end | |description=CAGE_peak_39_at_WWTR1_5end | ||
|id=chr3:149260147..149260154,- | |id=chr3:149260147..149260154,- | ||
|ontology_enrichment_celltype=CL:1000507!4.98e-11!12;CL:1000494!4.98e-11!12;CL:1000449!5.35e-10!16;CL:1000497!1.18e-08!18;CL:0002518!1.18e-08!18;CL:0000239!5.01e-08!3;CL:1000615!5.01e-08!3;CL:0002306!5.01e-08!3;CL:0002681!1.14e-07!13;CL:0002584!1.14e-07!13 | |ontology_enrichment_celltype=CL:1000507!4.98e-11!12;CL:1000494!4.98e-11!12;CL:1000449!5.35e-10!16;CL:1000497!1.18e-08!18;CL:0002518!1.18e-08!18;CL:0000239!5.01e-08!3;CL:1000615!5.01e-08!3;CL:0002306!5.01e-08!3;CL:0002681!1.14e-07!13;CL:0002584!1.14e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000239;1.14e-74;3!CL:1000615;1.14e-74;3!CL:0002306;1.14e-74;3!CL:1000507;6.75e-40;10!CL:1000494;6.75e-40;10!CL:1000449;8.01e-27;15!CL:0000313;9.79e-26;1!CL:1000497;9.69e-24;17!CL:0002518;9.69e-24;17!CL:0002681;2.33e-19;12!CL:0002584;2.33e-19;12!CL:0000159;1.37e-13;2!CL:0000075;5.36e-09;27!CL:0000243;7.76e-07;15!CL:0000125;7.76e-07;15 | |ontology_enrichment_celltype_v019=CL:0000239;1.14e-74;3!CL:1000615;1.14e-74;3!CL:0002306;1.14e-74;3!CL:1000507;6.75e-40;10!CL:1000494;6.75e-40;10!CL:1000449;8.01e-27;15!CL:0000313;9.79e-26;1!CL:1000497;9.69e-24;17!CL:0002518;9.69e-24;17!CL:0002681;2.33e-19;12!CL:0002584;2.33e-19;12!CL:0000159;1.37e-13;2!CL:0000075;5.36e-09;27!CL:0000243;7.76e-07;15!CL:0000125;7.76e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.01e-74,3;CL:1000615,1.01e-74,3;CL:0002306,1.01e-74,3;CL:1000507,6.42e-40,10;CL:1000494,6.42e-40,10;CL:1000449,7.74e-27,15;CL:0000313,1.26e-25,1;CL:1000497,9.41e-24,17;CL:0002518,9.41e-24,17;CL:0002681,2.26e-19,12;CL:0002584,2.26e-19,12;CL:0000159,1.55e-13,2;CL:0000075,5.29e-09,27;CL:0000243,7.87e-07,15;CL:0000125,7.87e-07,15;CL:0000030,7.87e-07,15;CL:0000339,7.87e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.52e-10;10!CL:0000339;7.76e-07;15 | |ontology_enrichment_development_v019=UBERON:0006238;4.52e-10;10!CL:0000339;7.76e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;9.79e-26;1!DOID:3093;2.60e-09;11 | |ontology_enrichment_disease_v019=DOID:2152;9.79e-26;1!DOID:3093;2.60e-09;11 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,1.26e-25,1;DOID:3093,2.66e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0009773!4.98e-11!12;UBERON:0001231!4.98e-11!12;UBERON:0004810!4.98e-11!12;UBERON:0000080!9.90e-11!18;UBERON:0002120!9.90e-11!18;UBERON:0004875!9.90e-11!18;UBERON:0005721!9.90e-11!18;UBERON:0005754!9.90e-11!18;UBERON:0007297!9.90e-11!18;UBERON:0004211!5.35e-10!16;UBERON:0001285!5.35e-10!16;UBERON:0007684!5.35e-10!16;UBERON:0003220!5.35e-10!16;UBERON:0004208!5.35e-10!16;UBERON:0000058!1.72e-09!26;UBERON:0004876!2.07e-09!20;UBERON:0006555!2.76e-09!17;UBERON:0005103!2.76e-09!17;UBERON:0000083!2.76e-09!17;UBERON:0009201!2.76e-09!17;UBERON:0004819!2.76e-09!17;UBERON:0006553!2.76e-09!17;UBERON:0003074!2.76e-09!17;UBERON:0003060!2.76e-09!17;UBERON:0003887!7.60e-09!21;UBERON:0006853!5.01e-08!3;UBERON:0007685!5.01e-08!3;UBERON:0004134!5.01e-08!3;UBERON:0001225!1.14e-07!13;UBERON:0008987!1.14e-07!13;UBERON:0002113!1.29e-07!27;UBERON:0003918!1.29e-07!27;UBERON:0005095!1.29e-07!27;UBERON:0007687!1.29e-07!27;UBERON:0000489!2.78e-07!32;UBERON:0000353!3.34e-07!17;UBERON:0003103!7.24e-07!69 | |ontology_enrichment_uberon=UBERON:0009773!4.98e-11!12;UBERON:0001231!4.98e-11!12;UBERON:0004810!4.98e-11!12;UBERON:0000080!9.90e-11!18;UBERON:0002120!9.90e-11!18;UBERON:0004875!9.90e-11!18;UBERON:0005721!9.90e-11!18;UBERON:0005754!9.90e-11!18;UBERON:0007297!9.90e-11!18;UBERON:0004211!5.35e-10!16;UBERON:0001285!5.35e-10!16;UBERON:0007684!5.35e-10!16;UBERON:0003220!5.35e-10!16;UBERON:0004208!5.35e-10!16;UBERON:0000058!1.72e-09!26;UBERON:0004876!2.07e-09!20;UBERON:0006555!2.76e-09!17;UBERON:0005103!2.76e-09!17;UBERON:0000083!2.76e-09!17;UBERON:0009201!2.76e-09!17;UBERON:0004819!2.76e-09!17;UBERON:0006553!2.76e-09!17;UBERON:0003074!2.76e-09!17;UBERON:0003060!2.76e-09!17;UBERON:0003887!7.60e-09!21;UBERON:0006853!5.01e-08!3;UBERON:0007685!5.01e-08!3;UBERON:0004134!5.01e-08!3;UBERON:0001225!1.14e-07!13;UBERON:0008987!1.14e-07!13;UBERON:0002113!1.29e-07!27;UBERON:0003918!1.29e-07!27;UBERON:0005095!1.29e-07!27;UBERON:0007687!1.29e-07!27;UBERON:0000489!2.78e-07!32;UBERON:0000353!3.34e-07!17;UBERON:0003103!7.24e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.14e-74;3!UBERON:0007685;1.14e-74;3!UBERON:0004134;1.14e-74;3!UBERON:0004211;6.75e-40;10!UBERON:0009773;6.75e-40;10!UBERON:0001231;6.75e-40;10!UBERON:0004810;6.75e-40;10!UBERON:0006555;8.01e-27;15!UBERON:0004819;8.01e-27;15!UBERON:0001285;8.01e-27;15!UBERON:0007684;8.01e-27;15!UBERON:0004911;9.79e-26;1!UBERON:0001225;2.33e-19;12!UBERON:0008987;2.33e-19;12!UBERON:0002113;5.56e-17;24!UBERON:0011143;5.56e-17;24!UBERON:0001851;1.21e-15;15!UBERON:0000353;1.21e-15;15!UBERON:0000489;3.84e-14;29!UBERON:0006554;1.10e-13;30!UBERON:0001008;1.10e-13;30!UBERON:0004909;1.37e-13;2 | |ontology_enrichment_uberon_v019=UBERON:0006853;1.14e-74;3!UBERON:0007685;1.14e-74;3!UBERON:0004134;1.14e-74;3!UBERON:0004211;6.75e-40;10!UBERON:0009773;6.75e-40;10!UBERON:0001231;6.75e-40;10!UBERON:0004810;6.75e-40;10!UBERON:0006555;8.01e-27;15!UBERON:0004819;8.01e-27;15!UBERON:0001285;8.01e-27;15!UBERON:0007684;8.01e-27;15!UBERON:0004911;9.79e-26;1!UBERON:0001225;2.33e-19;12!UBERON:0008987;2.33e-19;12!UBERON:0002113;5.56e-17;24!UBERON:0011143;5.56e-17;24!UBERON:0001851;1.21e-15;15!UBERON:0000353;1.21e-15;15!UBERON:0000489;3.84e-14;29!UBERON:0006554;1.10e-13;30!UBERON:0001008;1.10e-13;30!UBERON:0004909;1.37e-13;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,1.01e-74,3;UBERON:0007685,1.01e-74,3;UBERON:0004134,1.01e-74,3;UBERON:0004810,6.42e-40,10;UBERON:0004211,7.74e-27,15;UBERON:0009773,7.74e-27,15;UBERON:0001231,7.74e-27,15;UBERON:0001285,7.74e-27,15;UBERON:0007684,7.74e-27,15;UBERON:0004208,7.74e-27,15;UBERON:0004911,1.26e-25,1;UBERON:0006555,3.37e-25,16;UBERON:0004819,3.37e-25,16;UBERON:0001225,2.26e-19,12;UBERON:0008987,2.26e-19,12;UBERON:0002113,1.01e-15,26;UBERON:0003918,1.01e-15,26;UBERON:0011143,1.01e-15,26;UBERON:0005095,1.01e-15,26;UBERON:0007687,1.01e-15,26;UBERON:0001851,1.18e-15,15;UBERON:0000353,1.18e-15,15;UBERON:0004909,1.55e-13,2;UBERON:0000489,2.88e-13,31;UBERON:0006554,6.76e-09,47;UBERON:0001008,1.02e-08,48;UBERON:0005172,8.61e-08,54;UBERON:0005173,8.61e-08,54;UBERON:0002417,4.78e-07,60;UBERON:0000916,4.78e-07,60 | |||
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| ||
|short_description=p39@WWTR1 | |short_description=p39@WWTR1 | ||
}} | }} |
Latest revision as of 21:48, 15 September 2015
Short description: | p39@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_WWTR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_ENST00000485244_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.01e-74 | 3 |
kidney cortex tubule cell | 1.01e-74 | 3 |
epithelial cell of proximal tubule | 1.01e-74 | 3 |
kidney tubule cell | 6.42e-40 | 10 |
nephron tubule epithelial cell | 6.42e-40 | 10 |
epithelial cell of nephron | 7.74e-27 | 15 |
serous secreting cell | 1.26e-25 | 1 |
kidney cell | 9.41e-24 | 17 |
kidney epithelial cell | 9.41e-24 | 17 |
kidney cortical cell | 2.26e-19 | 12 |
renal cortical epithelial cell | 2.26e-19 | 12 |
seromucus secreting cell | 1.55e-13 | 2 |
columnar/cuboidal epithelial cell | 5.29e-09 | 27 |
glial cell (sensu Vertebrata) | 7.87e-07 | 15 |
glial cell | 7.87e-07 | 15 |
glioblast | 7.87e-07 | 15 |
glioblast (sensu Vertebrata) | 7.87e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 1.01e-74 | 3 |
region of nephron tubule | 1.01e-74 | 3 |
proximal tubule | 1.01e-74 | 3 |
nephron tubule epithelium | 6.42e-40 | 10 |
nephron epithelium | 7.74e-27 | 15 |
renal tubule | 7.74e-27 | 15 |
nephron tubule | 7.74e-27 | 15 |
nephron | 7.74e-27 | 15 |
uriniferous tubule | 7.74e-27 | 15 |
nephrogenic mesenchyme | 7.74e-27 | 15 |
epithelium of female gonad | 1.26e-25 | 1 |
excretory tube | 3.37e-25 | 16 |
kidney epithelium | 3.37e-25 | 16 |
cortex of kidney | 2.26e-19 | 12 |
renal parenchyma | 2.26e-19 | 12 |
kidney | 1.01e-15 | 26 |
kidney mesenchyme | 1.01e-15 | 26 |
upper urinary tract | 1.01e-15 | 26 |
kidney rudiment | 1.01e-15 | 26 |
kidney field | 1.01e-15 | 26 |
cortex | 1.18e-15 | 15 |
parenchyma | 1.18e-15 | 15 |
epithelium of gonad | 1.55e-13 | 2 |
cavitated compound organ | 2.88e-13 | 31 |
urinary system structure | 6.76e-09 | 47 |
renal system | 1.02e-08 | 48 |
abdomen element | 8.61e-08 | 54 |
abdominal segment element | 8.61e-08 | 54 |
abdominal segment of trunk | 4.78e-07 | 60 |
abdomen | 4.78e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.26e-25 | 1 |
nervous system cancer | 2.66e-09 | 11 |