FFCP PHASE1:Hg19::chr3:149260344..149260358,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:149260344..149260358,- to FFCP PHASE1:Hg19::chr3:149260344..149260358,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-118bp_to_ENST00000485244_5end | |||
|cluster_id=chr3:149260344..149260358,- | |||
|coexpression_cluster_id=C1922 | |||
|description=CAGE_peak_18_at_WWTR1_5end | |||
|id=chr3:149260344..149260358,- | |||
|ontology_enrichment_celltype=CL:0002139!1.83e-27!24;CL:0000115!1.62e-19!35;CL:0002078!2.54e-18!44;CL:0000213!3.32e-17!57;CL:0000215!3.32e-17!57;CL:0000071!1.43e-16!18;CL:0002546!1.43e-16!18;CL:0005020!1.49e-13!6;CL:0002138!1.49e-13!6;CL:0005022!1.49e-13!6;CL:0000222!3.44e-11!119;CL:0000066!3.85e-11!254;CL:0002543!6.26e-10!6;CL:1000497!1.75e-09!18;CL:0002518!1.75e-09!18;CL:1000507!5.06e-09!12;CL:1000494!5.06e-09!12;CL:1000449!1.70e-08!16;CL:0002681!2.74e-08!13;CL:0002584!2.74e-08!13;CL:0002144!5.09e-08!3;CL:0002618!5.09e-08!3;CL:0000220!5.61e-07!246;CL:0002321!7.69e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.64e-20;17!CL:0002518;1.64e-20;17!CL:1000507;4.40e-18;10!CL:1000494;4.40e-18;10!CL:1000449;4.13e-17;15!CL:0002681;3.55e-15;12!CL:0002584;3.55e-15;12!CL:0000239;8.26e-11;3!CL:1000615;8.26e-11;3!CL:0002306;8.26e-11;3!CL:0000313;3.72e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.16e-20,17;CL:0002518,2.16e-20,17;CL:1000507,5.78e-18,10;CL:1000494,5.78e-18,10;CL:1000449,5.36e-17,15;CL:0002681,4.26e-15,12;CL:0002584,4.26e-15,12;CL:0000239,5.98e-11,3;CL:1000615,5.98e-11,3;CL:0002306,5.98e-11,3;CL:0000313,3.58e-09,1;CL:0002078,2.87e-07,45;CL:0000066,5.00e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.74e-07;10!UBERON:0007687;1.74e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;2.17e-16;2!DOID:2152;3.72e-09;1!DOID:299;2.34e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.35e-16,2;DOID:2152,3.58e-09,1;DOID:299,2.23e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.43e-16!18;UBERON:0004638!1.43e-16!18;UBERON:0004852!1.43e-16!18;UBERON:0003914!5.62e-16!118;UBERON:0000487!5.28e-13!22;UBERON:0004111!1.56e-11!241;UBERON:0006914!4.37e-11!25;UBERON:0002113!1.95e-10!27;UBERON:0003918!1.95e-10!27;UBERON:0005095!1.95e-10!27;UBERON:0007687!1.95e-10!27;UBERON:0000058!3.45e-10!26;UBERON:0000055!3.66e-10!69;UBERON:0001473!5.84e-10!8;UBERON:0004536!5.84e-10!8;UBERON:0006558!5.84e-10!8;UBERON:0000025!7.05e-10!194;UBERON:0006555!7.65e-10!17;UBERON:0005103!7.65e-10!17;UBERON:0000083!7.65e-10!17;UBERON:0009201!7.65e-10!17;UBERON:0004819!7.65e-10!17;UBERON:0006553!7.65e-10!17;UBERON:0003074!7.65e-10!17;UBERON:0003060!7.65e-10!17;UBERON:0000080!3.44e-09!18;UBERON:0002120!3.44e-09!18;UBERON:0004875!3.44e-09!18;UBERON:0005721!3.44e-09!18;UBERON:0005754!3.44e-09!18;UBERON:0007297!3.44e-09!18;UBERON:0009773!5.06e-09!12;UBERON:0001231!5.06e-09!12;UBERON:0004810!5.06e-09!12;UBERON:0002417!5.80e-09!61;UBERON:0000916!5.80e-09!61;UBERON:0004211!1.70e-08!16;UBERON:0001285!1.70e-08!16;UBERON:0007684!1.70e-08!16;UBERON:0003220!1.70e-08!16;UBERON:0004208!1.70e-08!16;UBERON:0000489!2.38e-08!32;UBERON:0000477!2.58e-08!286;UBERON:0001225!2.74e-08!13;UBERON:0008987!2.74e-08!13;UBERON:0002049!3.48e-08!79;UBERON:0007798!3.48e-08!79;UBERON:0000119!3.62e-08!312;UBERON:0005172!3.77e-08!55;UBERON:0005173!3.77e-08!55;UBERON:0004876!4.41e-08!20;UBERON:0000490!5.00e-08!138;UBERON:0001915!5.09e-08!3;UBERON:0001982!5.09e-08!3;UBERON:0000483!7.15e-08!309;UBERON:0002465!8.34e-08!10;UBERON:0003887!1.31e-07!21;UBERON:0006554!2.39e-07!44;UBERON:0003103!3.42e-07!69;UBERON:0009569!3.89e-07!113;UBERON:0001008!4.12e-07!45;UBERON:0004535!5.87e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.02e-23;24!UBERON:0011143;1.02e-23;24!UBERON:0000489;2.13e-19;29!UBERON:0006554;1.04e-18;30!UBERON:0001008;1.04e-18;30!UBERON:0004211;4.40e-18;10!UBERON:0009773;4.40e-18;10!UBERON:0001231;4.40e-18;10!UBERON:0004810;4.40e-18;10!UBERON:0006555;4.13e-17;15!UBERON:0004819;4.13e-17;15!UBERON:0001285;4.13e-17;15!UBERON:0007684;4.13e-17;15!UBERON:0001225;3.55e-15;12!UBERON:0008987;3.55e-15;12!UBERON:0001851;4.10e-12;15!UBERON:0000353;4.10e-12;15!UBERON:0006853;8.26e-11;3!UBERON:0007685;8.26e-11;3!UBERON:0004134;8.26e-11;3!UBERON:0004911;3.72e-09;1!UBERON:0002171;5.08e-09;1!UBERON:0006518;5.08e-09;1!UBERON:0008949;5.08e-09;1!UBERON:0000101;5.08e-09;1!UBERON:0002167;5.08e-09;1!UBERON:0005172;3.80e-08;52!UBERON:0005173;3.80e-08;52!UBERON:0002417;9.37e-08;58!UBERON:0000916;9.37e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.03e-21,26;UBERON:0003918,1.03e-21,26;UBERON:0011143,1.03e-21,26;UBERON:0005095,1.03e-21,26;UBERON:0007687,1.03e-21,26;UBERON:0000489,5.37e-18,31;UBERON:0004810,5.78e-18,10;UBERON:0004211,5.36e-17,15;UBERON:0009773,5.36e-17,15;UBERON:0001231,5.36e-17,15;UBERON:0001285,5.36e-17,15;UBERON:0007684,5.36e-17,15;UBERON:0004208,5.36e-17,15;UBERON:0006555,6.58e-16,16;UBERON:0004819,6.58e-16,16;UBERON:0001225,4.26e-15,12;UBERON:0008987,4.26e-15,12;UBERON:0001851,4.74e-12,15;UBERON:0000353,4.74e-12,15;UBERON:0005172,4.86e-12,54;UBERON:0005173,4.86e-12,54;UBERON:0006554,2.08e-11,47;UBERON:0001008,3.84e-11,48;UBERON:0006853,5.98e-11,3;UBERON:0007685,5.98e-11,3;UBERON:0004134,5.98e-11,3;UBERON:0002417,1.13e-10,60;UBERON:0000916,1.13e-10,60;UBERON:0004911,3.58e-09,1;UBERON:0002171,4.89e-09,1;UBERON:0006518,4.89e-09,1;UBERON:0008949,4.89e-09,1;UBERON:0000101,4.89e-09,1;UBERON:0002167,4.89e-09,1;UBERON:0009569,7.79e-09,112;UBERON:0005177,1.89e-08,101;UBERON:0003103,1.82e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,1.33888245105868,0.805658634218294,0.760272105718513,1.70843440283719,0.735326160691737,2.43042584364528,1.42879565254528,0.898117490504679,0.788280363383256,0,0.949265659568129,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0.248107807818777,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0.451199612907412,1.00119938235739,0,0,1.16106791782163,0,0,2.15915916102139,0,0.270946437543853,1.00337954770971,1.78413391131527,0,2.46262230194396,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.255679882248303,2.04773681987496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,4.57051862845614,1.55488378577335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,2.58217991539867,1.569042694685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,10.1659362415966,2.62272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,1.32506888912221,0,0,4.96151829864555,0,0.961086713109252,0.157204305099666,3.72815149812476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0.168942440653073,21.7805290799755,1.0362910251936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0,0,0,0,0,16.4104969326152,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0.955538938977433,10.5144105889925,0,0.487671699929078,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,1.33888245105868,0.805658634218294,0.760272105718513,1.70843440283719,0.735326160691737,2.43042584364528,1.42879565254528,0.898117490504679,0.788280363383256,0,0.949265659568129,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0.248107807818777,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0.451199612907412,1.00119938235739,0,0,1.16106791782163,0,0,2.15915916102139,0,0.270946437543853,1.00337954770971,1.78413391131527,0,2.46262230194396,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.255679882248303,2.04773681987496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,4.57051862845614,1.55488378577335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,2.58217991539867,1.569042694685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,10.1659362415966,2.62272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,1.32506888912221,0,0,4.96151829864555,0,0.961086713109252,0.157204305099666,3.72815149812476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0.168942440653073,21.7805290799755,1.0362910251936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0,0,0,0,0,16.4104969326152,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0.955538938977433,10.5144105889925,0,0.487671699929078,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@WWTR1 | |||
}} | }} |
Latest revision as of 21:54, 15 September 2015
Short description: | p18@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_WWTR1_5end |
Coexpression cluster: | C1922_renal_mesothelioma_serous_Renal_glioblastoma_Skeletal_lung |
Association with transcript: | -118bp_to_ENST00000485244_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.16e-20 | 17 |
kidney epithelial cell | 2.16e-20 | 17 |
kidney tubule cell | 5.78e-18 | 10 |
nephron tubule epithelial cell | 5.78e-18 | 10 |
epithelial cell of nephron | 5.36e-17 | 15 |
kidney cortical cell | 4.26e-15 | 12 |
renal cortical epithelial cell | 4.26e-15 | 12 |
brush border epithelial cell | 5.98e-11 | 3 |
kidney cortex tubule cell | 5.98e-11 | 3 |
epithelial cell of proximal tubule | 5.98e-11 | 3 |
serous secreting cell | 3.58e-09 | 1 |
meso-epithelial cell | 2.87e-07 | 45 |
epithelial cell | 5.00e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.35e-16 | 2 |
ovary epithelial cancer | 3.58e-09 | 1 |
adenocarcinoma | 2.23e-07 | 25 |