FFCP PHASE1:Hg19::chr3:149293990..149294016,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:149293990..149294016,- to FFCP PHASE1:Hg19::chr3:149293990..149294016,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt=C9J337 | |UniProt=C9J337 | ||
|association_with_transcript=22bp_to_ENST00000472417_5end | |||
|cluster_id=chr3:149293990..149294016,- | |||
|description=CAGE_peak_7_at_WWTR1_5end | |||
|id=chr3:149293990..149294016,- | |||
|ontology_enrichment_celltype=CL:0000220!5.26e-20!246;CL:0002321!1.93e-19!248;CL:0000055!1.09e-16!180;CL:0000222!8.77e-15!119;CL:0000359!2.05e-14!32;CL:0000071!4.34e-13!18;CL:0002546!4.34e-13!18;CL:0002139!1.35e-12!24;CL:0000680!6.59e-11!57;CL:0000056!6.59e-11!57;CL:0000355!6.59e-11!57;CL:0000192!9.88e-11!42;CL:0000514!9.88e-11!42;CL:0000187!2.23e-10!54;CL:0000183!2.01e-09!59;CL:0000393!3.68e-09!60;CL:0000211!3.68e-09!60;CL:0000076!8.31e-09!62;CL:0002494!3.76e-08!16;CL:0000066!9.04e-08!254;CL:1000413!1.62e-07!9;CL:0000115!1.78e-07!35;CL:0002539!2.62e-07!10;CL:0002078!7.16e-07!44;CL:0000548!7.75e-07!679;CL:0000004!7.75e-07!679;CL:0000255!7.75e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000071;7.09e-22;18!CL:0002139;7.53e-21;24!CL:0000359;1.88e-20;32!CL:1000413;4.71e-13;9!CL:0000115;2.20e-11;36!CL:0002494;6.81e-11;16!CL:0000192;1.21e-10;43!CL:0002543;2.12e-09;6!CL:0002544;4.72e-09;6!CL:0002539;8.59e-09;10!CL:0000569;7.47e-07;4!CL:0002594;8.43e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,6.60e-22,18;CL:0002546,6.60e-22,18;CL:0000359,1.05e-21,32;CL:0002139,8.47e-21,24;CL:0000222,4.05e-18,121;CL:0000192,3.28e-14,43;CL:0000514,3.28e-14,43;CL:0002321,5.26e-14,250;CL:0000115,2.58e-13,36;CL:1000413,5.08e-13,9;CL:0000187,9.48e-12,55;CL:0002494,7.39e-11,16;CL:0000680,9.35e-11,58;CL:0000056,9.35e-11,58;CL:0000355,9.35e-11,58;CL:0000393,1.07e-10,61;CL:0000211,1.07e-10,61;CL:0002078,2.00e-10,45;CL:0002543,2.27e-09,6;CL:0002544,5.61e-09,6;CL:0002539,7.40e-09,10;CL:0000213,2.53e-08,58;CL:0000215,2.53e-08,58;CL:0000076,2.74e-08,63 | |||
|ontology_enrichment_development_v019=CL:0002546;7.09e-22;18!CL:0000514;1.21e-10;43!CL:0000011;7.47e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.13e-27!84;UBERON:0001981!2.19e-27!60;UBERON:0007500!2.19e-27!60;UBERON:0004537!2.19e-27!60;UBERON:0006965!2.19e-27!60;UBERON:0002049!2.86e-26!79;UBERON:0007798!2.86e-26!79;UBERON:0000055!3.41e-26!69;UBERON:0001637!1.07e-25!42;UBERON:0003509!1.07e-25!42;UBERON:0004572!1.07e-25!42;UBERON:0003914!1.70e-23!118;UBERON:0004535!2.65e-22!110;UBERON:0001009!7.82e-21!113;UBERON:0004573!1.17e-19!33;UBERON:0004571!1.17e-19!33;UBERON:0000119!5.58e-19!312;UBERON:0000483!1.23e-18!309;UBERON:0004111!1.66e-18!241;UBERON:0000025!3.70e-17!194;UBERON:0000477!9.32e-16!286;UBERON:0000490!3.96e-14!138;UBERON:0000947!1.38e-13!21;UBERON:0010191!1.38e-13!21;UBERON:0001986!4.34e-13!18;UBERON:0004638!4.34e-13!18;UBERON:0004852!4.34e-13!18;UBERON:0000487!1.30e-12!22;UBERON:0006914!7.52e-12!25;UBERON:0000475!1.26e-11!365;UBERON:0000486!3.19e-11!82;UBERON:0004290!4.50e-11!70;UBERON:0000914!4.52e-11!83;UBERON:0002329!4.52e-11!83;UBERON:0003077!4.52e-11!83;UBERON:0003059!4.52e-11!83;UBERON:0007282!4.52e-11!83;UBERON:0009618!4.52e-11!83;UBERON:0007285!4.52e-11!83;UBERON:0001134!6.52e-10!61;UBERON:0002036!6.52e-10!61;UBERON:0003082!6.52e-10!61;UBERON:0002385!1.62e-09!63;UBERON:0001015!1.62e-09!63;UBERON:0000383!1.62e-09!63;UBERON:0000467!2.33e-09!625;UBERON:0000480!3.19e-09!626;UBERON:0002100!1.06e-08!216;UBERON:0000948!1.87e-08!24;UBERON:0005498!1.87e-08!24;UBERON:0004140!1.87e-08!24;UBERON:0009881!1.87e-08!24;UBERON:0004141!1.87e-08!24;UBERON:0003084!1.87e-08!24;UBERON:0007005!1.87e-08!24;UBERON:0004139!1.87e-08!24;UBERON:0004291!1.87e-08!24;UBERON:0000481!1.15e-07!347;UBERON:0005256!1.26e-07!143;UBERON:0001048!1.53e-07!168;UBERON:0003915!1.62e-07!9;UBERON:0004700!1.62e-07!9;UBERON:0001917!1.62e-07!9;UBERON:0004237!2.62e-07!10;UBERON:0004695!2.62e-07!10;UBERON:0002111!2.62e-07!10;UBERON:0004178!2.62e-07!10;UBERON:0000468!2.63e-07!659;UBERON:0000923!5.12e-07!604;UBERON:0005291!5.12e-07!604;UBERON:0006598!5.12e-07!604;UBERON:0002532!5.12e-07!604;UBERON:0002050!6.71e-07!605;UBERON:0005423!6.71e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.30e-29;42!UBERON:0003509;1.30e-29;42!UBERON:0004572;1.30e-29;42!UBERON:0004573;1.55e-26;33!UBERON:0004571;1.55e-26;33!UBERON:0007500;4.30e-26;56!UBERON:0001981;4.30e-26;56!UBERON:0004537;4.30e-26;56!UBERON:0004638;7.09e-22;18!UBERON:0001986;7.09e-22;18!UBERON:0004852;7.09e-22;18!UBERON:0000055;4.13e-21;65!UBERON:0000487;6.30e-19;22!UBERON:0000947;3.66e-17;21!UBERON:0010191;3.66e-17;21!UBERON:0006914;5.65e-16;25!UBERON:0003914;4.62e-15;74!UBERON:0002049;5.81e-15;75!UBERON:0007798;5.81e-15;75!UBERON:0003915;4.71e-13;9!UBERON:0004700;4.71e-13;9!UBERON:0001917;4.71e-13;9!UBERON:0000490;8.69e-13;33!UBERON:0000025;1.15e-10;93!UBERON:0004535;5.86e-09;109!UBERON:0004237;8.59e-09;10!UBERON:0004695;8.59e-09;10!UBERON:0002111;8.59e-09;10!UBERON:0004178;8.59e-09;10!UBERON:0000948;2.32e-08;22!UBERON:0001009;1.71e-07;112!UBERON:0010260;1.96e-07;9!UBERON:0007100;5.62e-07;25!UBERON:0001310;8.43e-07;4 | |||
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| ||
|short_description=p7@WWTR1 | |||
}} | }} |
Latest revision as of 22:00, 15 September 2015
Short description: | p7@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_WWTR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000472417_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | C9J337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 6.60e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.60e-22 | 18 |
vascular associated smooth muscle cell | 1.05e-21 | 32 |
endothelial cell of vascular tree | 8.47e-21 | 24 |
mesodermal cell | 4.05e-18 | 121 |
smooth muscle cell | 3.28e-14 | 43 |
smooth muscle myoblast | 3.28e-14 | 43 |
embryonic cell | 5.26e-14 | 250 |
endothelial cell | 2.58e-13 | 36 |
endothelial cell of artery | 5.08e-13 | 9 |
muscle cell | 9.48e-12 | 55 |
cardiocyte | 7.39e-11 | 16 |
muscle precursor cell | 9.35e-11 | 58 |
myoblast | 9.35e-11 | 58 |
multi-potent skeletal muscle stem cell | 9.35e-11 | 58 |
electrically responsive cell | 1.07e-10 | 61 |
electrically active cell | 1.07e-10 | 61 |
meso-epithelial cell | 2.00e-10 | 45 |
vein endothelial cell | 2.27e-09 | 6 |
aortic endothelial cell | 5.61e-09 | 6 |
aortic smooth muscle cell | 7.40e-09 | 10 |
lining cell | 2.53e-08 | 58 |
barrier cell | 2.53e-08 | 58 |
squamous epithelial cell | 2.74e-08 | 63 |