FFCP PHASE1:Hg19::chr2:101767882..101767914,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17791 | |||
|TSSclassifier=strong | |||
|UniProt=O95759 | |||
|association_with_transcript=-36bp_to_ENST00000409318,NM_001102426,uc010fiv.2,uc010yvw.1_5end | |||
|cluster_id=chr2:101767882..101767914,- | |||
|description=CAGE_peak_2_at_TBC1D8_5end | |||
|id=chr2:101767882..101767914,- | |||
|ontology_enrichment_celltype=CL:0002057!9.55e-09!42;CL:0002009!3.58e-08!65;CL:0002194!3.82e-08!63;CL:0000576!3.82e-08!63;CL:0000040!3.82e-08!63;CL:0000559!3.82e-08!63;CL:0000860!8.09e-08!45;CL:0000557!3.71e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.42e-09,59;CL:0000576,1.42e-09,59;CL:0000040,1.42e-09,59;CL:0000559,1.42e-09,59;CL:0002009,1.55e-09,61;CL:0000473,4.07e-09,48;CL:0000234,4.07e-09,48;CL:0000860,5.24e-09,42;CL:0002057,5.24e-09,42;CL:0000557,4.29e-08,67;CL:0000839,7.81e-07,66;CL:0000766,8.44e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;8.11e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!5.36e-19!511;UBERON:0000922!2.03e-17!612;UBERON:0000467!4.14e-17!625;UBERON:0002050!4.28e-17!605;UBERON:0005423!4.28e-17!605;UBERON:0000923!6.87e-17!604;UBERON:0005291!6.87e-17!604;UBERON:0006598!6.87e-17!604;UBERON:0002532!6.87e-17!604;UBERON:0000468!7.52e-17!659;UBERON:0007023!7.85e-17!115;UBERON:0000480!9.85e-17!626;UBERON:0000033!1.92e-08!123;UBERON:0001017!3.15e-08!82;UBERON:0000924!3.43e-08!173;UBERON:0006601!3.43e-08!173;UBERON:0005743!8.07e-08!86;UBERON:0001049!9.06e-08!57;UBERON:0005068!9.06e-08!57;UBERON:0006241!9.06e-08!57;UBERON:0007135!9.06e-08!57;UBERON:0000955!9.06e-08!69;UBERON:0006238!9.06e-08!69;UBERON:0000153!9.15e-08!129;UBERON:0007811!9.15e-08!129;UBERON:0002616!1.01e-07!59;UBERON:0004121!1.03e-07!169;UBERON:0001007!2.23e-07!155;UBERON:0001555!2.23e-07!155;UBERON:0007026!2.23e-07!155;UBERON:0000073!4.52e-07!94;UBERON:0001016!4.52e-07!94;UBERON:0000481!4.82e-07!347;UBERON:0004765!5.91e-07!101;UBERON:0001434!5.91e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.76e-18,114;UBERON:0000922,3.22e-13,592;UBERON:0011216,6.22e-12,223;UBERON:0005423,1.62e-11,581;UBERON:0000923,4.40e-11,560;UBERON:0010316,4.40e-11,560;UBERON:0005291,4.40e-11,560;UBERON:0006598,4.40e-11,560;UBERON:0010317,4.40e-11,560;UBERON:0002532,4.40e-11,560;UBERON:0002050,6.17e-11,564;UBERON:0001434,4.61e-08,100;UBERON:0001017,1.02e-07,81;UBERON:0001049,1.08e-07,56;UBERON:0005068,1.08e-07,56;UBERON:0006241,1.08e-07,56;UBERON:0007135,1.08e-07,56;UBERON:0000073,1.82e-07,53;UBERON:0002616,1.82e-07,53;UBERON:0000955,2.10e-07,68;UBERON:0006238,2.10e-07,68;UBERON:0004121,4.28e-07,171;UBERON:0000924,4.28e-07,171;UBERON:0006601,4.28e-07,171;UBERON:0001016,8.35e-07,89 | |||
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| |||
|short_description=p2@TBC1D8 | |||
}} |
Latest revision as of 23:31, 15 September 2015
Short description: | p2@TBC1D8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBC1D8_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000409318, NM_001102426, uc010fiv.2, uc010yvw.1_5end |
EntrezGene: | TBC1D8 |
HGNC: | 17791 |
UniProt: | O95759 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.42e-09 | 59 |
monocyte | 1.42e-09 | 59 |
monoblast | 1.42e-09 | 59 |
promonocyte | 1.42e-09 | 59 |
macrophage dendritic cell progenitor | 1.55e-09 | 61 |
defensive cell | 4.07e-09 | 48 |
phagocyte | 4.07e-09 | 48 |
classical monocyte | 5.24e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.24e-09 | 42 |
granulocyte monocyte progenitor cell | 4.29e-08 | 67 |
myeloid lineage restricted progenitor cell | 7.81e-07 | 66 |
myeloid leukocyte | 8.44e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.76e-18 | 114 |
embryo | 3.22e-13 | 592 |
organ system subdivision | 6.22e-12 | 223 |
developing anatomical structure | 1.62e-11 | 581 |
germ layer | 4.40e-11 | 560 |
germ layer / neural crest | 4.40e-11 | 560 |
embryonic tissue | 4.40e-11 | 560 |
presumptive structure | 4.40e-11 | 560 |
germ layer / neural crest derived structure | 4.40e-11 | 560 |
epiblast (generic) | 4.40e-11 | 560 |
embryonic structure | 6.17e-11 | 564 |
skeletal system | 4.61e-08 | 100 |
central nervous system | 1.02e-07 | 81 |
neural tube | 1.08e-07 | 56 |
neural rod | 1.08e-07 | 56 |
future spinal cord | 1.08e-07 | 56 |
neural keel | 1.08e-07 | 56 |
regional part of nervous system | 1.82e-07 | 53 |
regional part of brain | 1.82e-07 | 53 |
brain | 2.10e-07 | 68 |
future brain | 2.10e-07 | 68 |
ectoderm-derived structure | 4.28e-07 | 171 |
ectoderm | 4.28e-07 | 171 |
presumptive ectoderm | 4.28e-07 | 171 |
nervous system | 8.35e-07 | 89 |