FFCP PHASE1:Hg19::chr5:147582468..147582479,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404203 | |EntrezGene=404203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29486 | |HGNC=29486 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWN8 | |UniProt=Q6UWN8 | ||
|association_with_transcript=64bp_to_ENST00000325630,uc003lpa.2_5end | |association_with_transcript=64bp_to_ENST00000325630,uc003lpa.2_5end | ||
|cluster_id=chr5:147582468..147582479,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_3_at_SPINK6_5end | |description=CAGE_peak_3_at_SPINK6_5end | ||
|id=chr5:147582468..147582479,+ | |id=chr5:147582468..147582479,+ | ||
|ontology_enrichment_celltype=CL:0002159!2.84e-18!13;CL:0000622!1.52e-16!5;CL:0000362!7.03e-16!8;CL:0000154!8.20e-14!6;CL:0000317!1.79e-11!2;CL:1000448!1.79e-11!2;CL:0002308!1.79e-11!2;CL:0002140!1.79e-11!2;CL:0000312!1.09e-09!5;CL:0000150!3.05e-09!9;CL:0000240!3.80e-08!6;CL:0000311!3.80e-08!6;CL:0000079!3.80e-08!6;CL:0000237!3.80e-08!6;CL:0000036!3.80e-08!6;CL:0000357!3.80e-08!6;CL:0000114!3.80e-08!6;CL:0000066!6.33e-08!254;CL:0002623!1.48e-07!3;CL:0002573!2.67e-07!2 | |ontology_enrichment_celltype=CL:0002159!2.84e-18!13;CL:0000622!1.52e-16!5;CL:0000362!7.03e-16!8;CL:0000154!8.20e-14!6;CL:0000317!1.79e-11!2;CL:1000448!1.79e-11!2;CL:0002308!1.79e-11!2;CL:0002140!1.79e-11!2;CL:0000312!1.09e-09!5;CL:0000150!3.05e-09!9;CL:0000240!3.80e-08!6;CL:0000311!3.80e-08!6;CL:0000079!3.80e-08!6;CL:0000237!3.80e-08!6;CL:0000036!3.80e-08!6;CL:0000357!3.80e-08!6;CL:0000114!3.80e-08!6;CL:0000066!6.33e-08!254;CL:0002623!1.48e-07!3;CL:0002573!2.67e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000317;8.55e-23;2!CL:1000448;8.55e-23;2!CL:0002308;8.55e-23;2!CL:0002140;8.55e-23;2!CL:0000622;3.38e-20;5!CL:0000154;6.08e-17;6!CL:0002159;1.07e-12;14!CL:0000150;1.69e-11;9!CL:0000362;1.69e-11;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,9.56e-23,2;CL:1000448,9.56e-23,2;CL:0002308,9.56e-23,2;CL:0002140,9.56e-23,2;CL:0000622,3.39e-20,5;CL:0000154,6.08e-17,6;CL:0002159,1.29e-12,14;CL:0000150,1.69e-11,9;CL:0000362,1.88e-11,9;CL:0000066,4.58e-09,253;CL:1000415,9.02e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.33e-30;29 | |||
|ontology_enrichment_disease=DOID:0060084!1.86e-07!3;DOID:127!1.86e-07!3 | |ontology_enrichment_disease=DOID:0060084!1.86e-07!3;DOID:127!1.86e-07!3 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.67e-11,106;DOID:0050687,5.72e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.26e-47!9;UBERON:0001557!1.64e-21!19;UBERON:0008947!1.03e-14!38;UBERON:0003258!1.03e-14!38;UBERON:0000065!8.08e-12!53;UBERON:0000072!9.06e-12!46;UBERON:0002419!1.79e-11!2;UBERON:0007771!1.79e-11!2;UBERON:0003297!1.79e-11!2;UBERON:0001821!1.79e-11!2;UBERON:0003487!1.79e-11!2;UBERON:0001820!1.79e-11!2;UBERON:0005089!1.79e-11!2;UBERON:0005088!1.79e-11!2;UBERON:0001004!3.73e-11!72;UBERON:0001003!5.78e-09!14;UBERON:0007376!5.78e-09!14;UBERON:0007383!5.78e-09!14 | |ontology_enrichment_uberon=UBERON:0001737!3.26e-47!9;UBERON:0001557!1.64e-21!19;UBERON:0008947!1.03e-14!38;UBERON:0003258!1.03e-14!38;UBERON:0000065!8.08e-12!53;UBERON:0000072!9.06e-12!46;UBERON:0002419!1.79e-11!2;UBERON:0007771!1.79e-11!2;UBERON:0003297!1.79e-11!2;UBERON:0001821!1.79e-11!2;UBERON:0003487!1.79e-11!2;UBERON:0001820!1.79e-11!2;UBERON:0005089!1.79e-11!2;UBERON:0005088!1.79e-11!2;UBERON:0001004!3.73e-11!72;UBERON:0001003!5.78e-09!14;UBERON:0007376!5.78e-09!14;UBERON:0007383!5.78e-09!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.98e-100;9!UBERON:0001557;7.98e-100;9!UBERON:0002419;8.55e-23;2!UBERON:0007771;8.55e-23;2!UBERON:0003297;8.55e-23;2!UBERON:0001821;8.55e-23;2!UBERON:0003487;8.55e-23;2!UBERON:0001820;8.55e-23;2!UBERON:0000072;4.97e-22;37!UBERON:0000065;1.43e-18;44!UBERON:0001004;1.99e-12;65!UBERON:0001003;4.16e-07;15!UBERON:0007376;4.16e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.99e-100,9;UBERON:0001557,7.69e-47,19;UBERON:0008947,6.29e-23,38;UBERON:0003258,6.29e-23,38;UBERON:0002419,9.56e-23,2;UBERON:0007771,9.56e-23,2;UBERON:0003297,9.56e-23,2;UBERON:0001821,9.56e-23,2;UBERON:0003487,9.56e-23,2;UBERON:0001820,9.56e-23,2;UBERON:0005089,9.56e-23,2;UBERON:0005088,9.56e-23,2;UBERON:0000072,2.47e-18,47;UBERON:0000065,8.12e-16,54;UBERON:0001004,7.19e-14,74;UBERON:0001041,1.35e-11,87;UBERON:0001048,6.24e-10,160;UBERON:0004921,4.14e-08,118;UBERON:0001007,9.29e-08,145;UBERON:0001555,9.29e-08,145;UBERON:0007026,9.29e-08,145;UBERON:0001003,4.43e-07,15;UBERON:0007376,4.43e-07,15;UBERON:0007383,4.43e-07,15;UBERON:0004119,6.91e-07,160;UBERON:0000925,6.91e-07,160;UBERON:0006595,6.91e-07,160 | |||
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|short_description=p3@SPINK6 | |short_description=p3@SPINK6 | ||
}} | }} |
Latest revision as of 23:40, 15 September 2015
Short description: | p3@SPINK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPINK6_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 64bp_to_ENST00000325630, uc003lpa.2_5end |
EntrezGene: | SPINK6 |
HGNC: | 29486 |
UniProt: | Q6UWN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 9.56e-23 | 2 |
epithelial cell of sweat gland | 9.56e-23 | 2 |
epithelial cell of skin gland | 9.56e-23 | 2 |
acinar cell of sebaceous gland | 9.56e-23 | 2 |
acinar cell | 3.39e-20 | 5 |
protein secreting cell | 6.08e-17 | 6 |
general ecto-epithelial cell | 1.29e-12 | 14 |
glandular epithelial cell | 1.69e-11 | 9 |
epidermal cell | 1.88e-11 | 9 |
epithelial cell | 4.58e-09 | 253 |
epithelial cell of gall bladder | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.99e-100 | 9 |
upper respiratory tract | 7.69e-47 | 19 |
respiratory primordium | 6.29e-23 | 38 |
endoderm of foregut | 6.29e-23 | 38 |
skin gland | 9.56e-23 | 2 |
epidermis gland | 9.56e-23 | 2 |
gland of integumental system | 9.56e-23 | 2 |
sebaceous gland | 9.56e-23 | 2 |
skin sebaceous gland | 9.56e-23 | 2 |
sweat gland | 9.56e-23 | 2 |
sweat gland placode | 9.56e-23 | 2 |
sebaceous gland placode | 9.56e-23 | 2 |
segment of respiratory tract | 2.47e-18 | 47 |
respiratory tract | 8.12e-16 | 54 |
respiratory system | 7.19e-14 | 74 |
foregut | 1.35e-11 | 87 |
primordium | 6.24e-10 | 160 |
subdivision of digestive tract | 4.14e-08 | 118 |
digestive system | 9.29e-08 | 145 |
digestive tract | 9.29e-08 | 145 |
primitive gut | 9.29e-08 | 145 |
skin epidermis | 4.43e-07 | 15 |
outer epithelium | 4.43e-07 | 15 |
enveloping layer of ectoderm | 4.43e-07 | 15 |
endoderm-derived structure | 6.91e-07 | 160 |
endoderm | 6.91e-07 | 160 |
presumptive endoderm | 6.91e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.67e-11 | 106 |
cell type cancer | 5.72e-08 | 143 |